Contig 000764:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I01Sequence613000764 (8)ref|XP_009802944.1|4e-25PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294656009781 (5)gb|KDO55686.1|8e-28hypothetical protein CISIN_1g004592mg [Citrus sinensis] gb|KDO55687.1| hypotheti
JMFF043H02Sequence639000764 (8)ref|XP_009802944.1|6e-29PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294599009781 (5)ref|XP_006338672.1|3e-12PREDICTED: transcription factor GTE8-like isoform X1 [Solanum tuberosum] ref|XP
JMFS015G10Sequence544000764 (8)ref|XP_011098835.1|1e-18PREDICTED: transcription factor GTE8 [Sesamum indicum]
JMFS097F07Sequence611000764 (8)ref|XP_009802944.1|4e-27PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294
JMFS108C12Sequence617000764 (8)ref|XP_009802944.1|4e-27PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294
JMFS145A09Sequence620000764 (8)ref|XP_009802944.1|4e-27PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294
JMSF025I02Sequence704000764 (8)ref|XP_009802944.1|2e-24PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294740009781 (5)ref|XP_006447148.1|3e-26hypothetical protein CICLE_v10014390mg [Citrus clementina] ref|XP_006447149.1| h
JMSF026E24Sequence622000764 (8)ref|XP_009802944.1|4e-27PREDICTED: transcription factor GTE8-like [Nicotiana sylvestris] ref|XP_00980294716009781 (5)gb|KDO55686.1|8e-25hypothetical protein CISIN_1g004592mg [Citrus sinensis] gb|KDO55687.1| hypotheti

Alignment

This contig is upended


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JMSF026E24+                                                                   TGGA
JMFS108C12+                                                                   TGGA
JMFF043H02+                                                  GCAGATCAATTTTCTTCTGGA
JMFS097F07+                                                                     GA
JMFS145A09+                                                                     GA
                      ____________________________________________________________
consensus                                                    GCAGATCAATTTTCTTCTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026E24+           GAATACGAGTCCGTTCGAGTTCAGATTTCAACTGCAGTACTAAGTTCCATCTCTCAGATG
JMFS108C12+           GAATACGAGTCCGTTCGAGTTCAGATTTCAACTGCAGTACTAAGTTCCATCTCTCAGATG
JMFF043H02+           GAATACGAGTCCGTTCGAGTTCAGATTTCAACTGCAGTACTAAGTTCCATCTCTCAGATG
JMFS097F07+           GAATACGAGTCCGTTCGAGTTCAGATTTCAACTGCAGTACTAAGTTCCATCTCTCAGATG
JMFF015I01+               ACGAGTCCGTTCGAGTTCAGATTTCAACTGCAGTAGTAAGTTCCATCTCTCAGATG
JMFS145A09+           GAATACGAGTCCGTTCGAGTTCAGATTTCAACTGCAGTACTAAGTTCCATCTCTCAGATG
JMFS015G10+                                                                      G
JMSF025I02+                           GAGTTCAGATTTCAACTGCAGTACTAAGTTCCATCTCTCAGATG
                      ____________________________________________________________
consensus             GAATACGAGTCCGTTCGAGTTCAGATTTCAACTGCAGTACTAAGTTCCATCTCTCAGATG
 
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JMSF026E24+           GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
JMFS108C12+           GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
JMFF043H02+           GAGAGAGTTGAGCCAAAGGTATAACTNGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
JMFS097F07+           GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
JMFF015I01+           GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
JMFS145A09+           GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
JMFS015G10+           GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
JMSF025I02+           GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
                      ____________________________________________________________
consensus             GAGAGAGTTGAGCCAAAGGTATAACTTGTAGGGGCACAGCAAAACCATCATTAGAAGAAG
 
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JMSF026E24+           AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
JMFS108C12+           AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
JMFF043H02+           AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
JMFS097F07+           AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
JMFF015I01+           AATTTAAATTAATCCACTTTCTTNTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
JMFS145A09+           AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
JMFS015G10+           AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
JMSF025I02+           AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
                      ____________________________________________________________
consensus             AATTTAAATTAATCCACTTTCTTCTAGGGGCAGTTGAAGCCTGTGAAACCCCCATTTCTG
 
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JMSF026E24+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
JMFS108C12+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
JMFF043H02+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
JMFS097F07+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
JMFF015I01+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
JMFS145A09+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
JMFS015G10+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
JMSF025I02+           TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
                      ____________________________________________________________
consensus             TATCAATTCTTCCCGAACTGCCAGAATCTTCCAACTCATAATTAGTGGCAAAGCCAGCAG
 
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JMSF026E24+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
JMFS108C12+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
JMFF043H02+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
JMFS097F07+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
JMFF015I01+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
JMFS145A09+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
JMFS015G10+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
JMSF025I02+           AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
                      ____________________________________________________________
consensus             AATATCCTCCTGAAAACCTATCCTTCTTCGACACCATCTTTCATACCATACTCCCACGGT
 
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JMSF026E24+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
JMFS108C12+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
JMFF043H02+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
JMFS097F07+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
JMFF015I01+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
JMFS145A09+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
JMFS015G10+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
JMSF025I02+           TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
                      ____________________________________________________________
consensus             TCCTTTTATCCACTAGGCACAATACCCATATCTTCGCATAGCCTCGGTATTCTAGTCCCT
 
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JMSF026E24+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
JMFS108C12+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
JMFF043H02+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
JMFS097F07+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
JMFF015I01+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
JMFS145A09+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
JMFS015G10+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
JMSF025I02+           GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
                      ____________________________________________________________
consensus             GGATCCGGAGCGCTTTCACTCGGCAACCAGAGAAGGAAACCCTATTCCTCCATCAATTCG
 
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JMSF026E24+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
JMFS108C12+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
JMFF043H02+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
JMFS097F07+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
JMFF015I01+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
JMFS145A09+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
JMFS015G10+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
JMSF025I02+           ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
                      ____________________________________________________________
consensus             ATCCAATTCCTAACATTCAAAATATATTTCGGGGCGGGCAAATTATAAAAAATACATATA
 
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JMSF026E24+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
JMFS108C12+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
JMFF043H02+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
JMFS097F07+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
JMFF015I01+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
JMFS145A09+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
JMFS015G10+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
JMSF025I02+           TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
                      ____________________________________________________________
consensus             TAAGAAAGAGAAAGTGCAATTCTTGCAAACCCTAGGAGGAGGAGGAGGAGAGTAGCAGAG
 
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JMSF026E24+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
JMFS108C12+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
JMFF043H02+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
JMFS097F07+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
JMFF015I01+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
JMFS145A09+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
JMFS015G10+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
JMSF025I02+           ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
                      ____________________________________________________________
consensus             ATAAACGGATGCGGTATCGGCGGCGATCGCGATCGCAATCGAAGCGGCTGAAAGCAGAGG
 
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JMSF026E24+           AAAGCTCCCTCAGCTCC                                           
JMFS108C12+           AAAGCTCCCTCAG                                               
JMFF043H02+           AAAGCTCCCTCAGCTCC                                           
JMFS097F07+           AAAGCTCCC                                                   
JMFF015I01+           AAAGCTCCCTCAGCTCC                                           
JMFS145A09+           AAAGCTCCCTCAGCTCC                                           
JMFS015G10+           AAA                                                         
JMSF025I02+           AAAGCTCCCTCAGCTCCACGGAGAGAGAGAAAAAACGAAAAGGAAGGAGTTTTCTAGCCC
                      ____________________________________________________________
consensus             AAAGCTCCCTCAGCTCCACGGAGAGAGAGAAAAAACGAAAAGGAAGGAGTTTTCTAGCCC
 
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JMSF025I02+           GGCCGTCCTATTAAAGATCTGAGCCGTAGATCTCGATTCCGGCTTCACTGAAGCGGTGTC
                      ____________________________________________________________
consensus             GGCCGTCCTATTAAAGATCTGAGCCGTAGATCTCGATTCCGGCTTCACTGAAGCGGTGTC