Contig 000758:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021N23Sequence586000758 (2)687008519 (2)ref|XP_009612376.1|1e-60PREDICTED: rop guanine nucleotide exchange factor 5-like [Nicotiana tomentosifo
JMSF025B04Sequence587000758 (2)686008519 (2)ref|XP_009612376.1|2e-57PREDICTED: rop guanine nucleotide exchange factor 5-like [Nicotiana tomentosifo

Alignment

This contig is upended


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JMSF021N23+                         TTCGCCTGTTGCTGAGCTACACCTTTCTTCGAGCAGTTGGTGGACT
JMSF025B04+                       CCTTCGCCTGTTGCTGAGCTACACCTTTCTTCGAGCAGTTGGTGGACT
                      ____________________________________________________________
consensus                         CCTTCGCCTGTTGCTGAGCTACACCTTTCTTCGAGCAGTTGGTGGACT
 
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JMSF021N23+           GGGCCTTCCGGATGGGCCATCCCAGAGCCGGCGGCGAGTAGCCGCCCCCCCNTTCCGTCT
JMSF025B04+           GGGCCTTCCGGATGGGCCATCCCAGAGCCGGCGGCGAGTAGCCGCCCCCCCNTTCC-TCT
                      ____________________________________________________________
consensus             GGGCCTTCCGGATGGGCCATCCCAGAGCCGGCGGCGAGTAGCCGCCCCCCCNTTCCGTCT
 
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JMSF021N23+           ACTCTCGTCCGACGACGAGTCAGAAGTCGACCCCCTCGAACTCGAATCAATCAACGACTC
JMSF025B04+           ACTCTCGTCCGACGACGAGTCAGAAGTCGACCCCCTCGAACTCGAATCAATCAACGACTC
                      ____________________________________________________________
consensus             ACTCTCGTCCGACGACGAGTCAGAAGTCGACCCCCTCGAACTCGAATCAATCAACGACTC
 
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JMSF021N23+           AGACATACTAGACCCATCTCCTCTCTTGCTCATCTTCAAGAAGATGAGGAAAAGCTAGTA
JMSF025B04+           AGACATACTAGACCCATCTCCTCTCTTGCTCATCTTCAAGAAGATGAGGAAAAGCTAGTA
                      ____________________________________________________________
consensus             AGACATACTAGACCCATCTCCTCTCTTGCTCATCTTCAAGAAGATGAGGAAAAGCTAGTA
 
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JMSF021N23+           TAGGTTGTCGTTTACAATTACTGACAATACCCAAAATAAATACACCTAAGATAAGCTACT
JMSF025B04+           TAGGTTGTCGTTTACAATTACTGACAATACCCAAAATAAATACACCTAAGATAAGCTACT
                      ____________________________________________________________
consensus             TAGGTTGTCGTTTACAATTACTGACAATACCCAAAATAAATACACCTAAGATAAGCTACT
 
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JMSF021N23+           GGGAAGAAAACTTAAGCACTATATACAAGGAATCTGCAATATTTGCTTCCTTATTCATCA
JMSF025B04+           GGGAAGAAAACTTAAGCACTATATACAAGGAATCTGCAATATTTGCTTCCTTATTCATCA
                      ____________________________________________________________
consensus             GGGAAGAAAACTTAAGCACTATATACAAGGAATCTGCAATATTTGCTTCCTTATTCATCA
 
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JMSF021N23+           CCCATCCACCTCAAAAAGACTCCAACTTTTTTCAAACAAAACACCCAGAAAACACAGATA
JMSF025B04+           CCCATCCACCTCAAAAAGACTCCAACTTTTTTCAAACAAAACACCCAGAAAACACAGATA
                      ____________________________________________________________
consensus             CCCATCCACCTCAAAAAGACTCCAACTTTTTTCAAACAAAACACCCAGAAAACACAGATA
 
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JMSF021N23+           ATGAGCTCAAACGATGCTAGCCCATCAAGAATCTTAGCTCACAAAGTTAGATGATTCTCA
JMSF025B04+           ATGAGCTCAAACGATGCTAGCCCATCAAGAATCTTAGCTCACAAAGTTAGATGATTCTCA
                      ____________________________________________________________
consensus             ATGAGCTCAAACGATGCTAGCCCATCAAGAATCTTAGCTCACAAAGTTAGATGATTCTCA
 
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JMSF021N23+           TCAGAATTGAAAGAAGTGTGAAGTAGGATGTTTTGGAATGGGATTTATGGGATGGGAGTA
JMSF025B04+           TCAGAATTGAAAGAAGTGTGAAGTAGGATGTTTTGGAATGGGATTTATGGGATGGGAGTA
                      ____________________________________________________________
consensus             TCAGAATTGAAAGAAGTGTGAAGTAGGATGTTTTGGAATGGGATTTATGGGATGGGAGTA
 
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JMSF021N23+           CCAAGTTTTCAAATTTTGAGGTTAACTGCCTTTCGGTCTATGGCCACATGCCAACG    
JMSF025B04+           CCAAGTTTTCAAATTTTGAGGTTAACTGCCTTTCGGTCTATGGCCACATGCCAACGTCTC
                      ____________________________________________________________
consensus             CCAAGTTTTCAAATTTTGAGGTTAACTGCCTTTCGGTCTATGGCCACATGCCAACGTCTC