Contig 000757:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021M24Sequence528000757 (5)ref|XP_009616503.1|3e-88PREDICTED: chaperonin CPN60-2, mitochondrial [Nicotiana tomentosiformis]690007116 (5)gb|KHG09712.1|1e-89Chaperonin CPN60-2, mitochondrial [Gossypium arboreum]
JMFF042P16Sequence652000757 (5)ref|XP_009616503.1|3e-112PREDICTED: chaperonin CPN60-2, mitochondrial [Nicotiana tomentosiformis]658007116 (5)gb|KHG09712.1|4e-57Chaperonin CPN60-2, mitochondrial [Gossypium arboreum]
JMSF016C10Sequence228000757 (5)emb|CDO99385.1|7e-17unnamed protein product [Coffea canephora]727007116 (5)gb|KHG09712.1|9e-94Chaperonin CPN60-2, mitochondrial [Gossypium arboreum]
JMSF023M09Sequence639000757 (5)ref|XP_009616503.1|2e-115PREDICTED: chaperonin CPN60-2, mitochondrial [Nicotiana tomentosiformis]791007116 (5)gb|KHG09712.1|2e-90Chaperonin CPN60-2, mitochondrial [Gossypium arboreum]
JMSF025A15Sequence678000757 (5)ref|XP_009616503.1|1e-99PREDICTED: chaperonin CPN60-2, mitochondrial [Nicotiana tomentosiformis]768007116 (5)gb|KHG09712.1|7e-102Chaperonin CPN60-2, mitochondrial [Gossypium arboreum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025A15+ CTCCATAGCCTTGCAATCA
                      ____________________________________________________________
consensus CTCCATAGCCTTGCAATCA
 
. : . : . : . : . : . :
JMFF042P16+ TTGTACCAACCTGTGCAATTTCTTCTGA
JMSF023M09+ ATTTGCGGAAATTGTACCAACCTGTGCAATTTCTTCTGA
JMSF025A15+ ACTCACCAATTCTCTTTCCCCATTTGCGGAAATTGTACCAACCTGTGCAATTTCTTCTGA
                      ____________________________________________________________
consensus ACTCACCAATTCTCTTTCCCCATTTGCGGAAATTGTACCAACCTGTGCAATTTCTTCTGA
 
. : . : . : . : . : . :
JMFF042P16+ TGTACTTATCATCCGTGCTCTGCTCTTCAGGTTTGTGACCACAGAATCAACAGCCATGGT
JMSF023M09+ TGTACTTATCATCCGTGCTCTGCTCTTCAGGTTTGTGACCACAGAATCAACAGCCATGGT
JMSF025A15+ TGTACTTATCATCCGTGCTCTG-TCTTCAGGTTTGTGACCACAGAATCAACAGCCATGGT
                      ____________________________________________________________
consensus TGTACTTATCATCCGTGCTCTGCTCTTCAGGTTTGTGACCACAGAATCAACAGCCATGGT
 
. : . : . : . : . : . :
JMFF042P16+ GATACCACGTCTAAGATCCATTGCATTCATGCCAGCTGCAACTGACTTACAGCCTTCAGC
JMSF023M09+ GATACCACGTCTAAGATCCATTGCATTCATGCCAGCTGCAACTGACTTACAGCCTTCAGC
JMFF021M24+ TAAGATCCATTGCATTCATGCCAGCTGCAACTGACTTACAGCCTTCAGC
JMSF025A15+ GATACCACGTCTAAGATCCATTGCATTCATGCCAGCTGCAACTGACTTACAGCCTTCAGC
                      ____________________________________________________________
consensus GATACCACGTCTAAGATCCATTGCATTCATGCCAGCTGCAACTGACTTACAGCCTTCAGC
 
. : . : . : . : . : . :
JMFF042P16+ AAATATAGCCCGTGTGAGGACAGTTGCACAAGTGGTACCATCACCAGCAACATCATTAGT
JMSF023M09+ AAATATAGCCCGTGTGAGGACAGTTGCACAAGTGGTACCATCACCAGCAACATCATTAGT
JMFF021M24+ AAATATAGCCCGTGTGAGGACAGTTGCACAAGTGGTACCATCACCAGCAACATCATTAGT
JMSF025A15+ AAATATAGCCCGTGTGAGGACAGTTGCACAAGTGGTACCATCACCAGCAACATCATTAGT
                      ____________________________________________________________
consensus AAATATAGCCCGTGTGAGGACAGTTGCACAAGTGGTACCATCACCAGCAACATCATTAGT
 
. : . : . : . : . : . :
JMFF042P16+ AGCATTAGCAACCTGCTTTACCAGGCTCGCACCAACATTCTTCACTTTGTTGTTGAATTC
JMSF023M09+ AGCATTAGCAACCTGCTTTACCAGGCTCGCACCAACATTCTTCACTTTGTTGTTGAATTC
JMFF021M24+ AGCATTAGCAACCTGCTTTACCAGGCTCGCACCAACATTCTTCACTTTGTTGTTGAATTC
JMSF025A15+ AGCATTAGCAACCTGCTTTACCAGGCTCGCACCAACATTCTTCACTTTGTTGTTGAATTC
                      ____________________________________________________________
consensus AGCATTAGCAACCTGCTTTACCAGGCTCGCACCAACATTCTTCACTTTGTTGTTGAATTC
 
. : . : . : . : . : . :
JMFF042P16+ AACACTTTTTGCAACTGTGACACCATCTTTTGTTACTTTAGGGGCACCCCAACTTTGTTC
JMSF023M09+ AACACTTTTTGCAACTGTGACACCATCTTTTGTTACTTTAGGGGCACCCCAACTTTGTTC
JMFF021M24+ AACACTTTTTGCAACTGTGACACCATCTTTTGTTACTTTAGGGGCACCCCAACTTTGTTC
JMSF025A15+ AACACTTTTTGCAACTGTGACACCATCTTTTGTTACTTTAGGGGCACCCCAACTTTGTTC
                      ____________________________________________________________
consensus AACACTTTTTGCAACTGTGACACCATCTTTTGTTACTTTAGGGGCACCCCAACTTTGTTC
 
. : . : . : . : . : . :
JMFF042P16+ AATAACAACATTACGTCCCTTGGGACCCATAGTAACTTTAACTGCATCAGCAAGTTCTTC
JMSF023M09+ AATAACAACATTACGTCCCTTGGGACCCATAGTAACTTTAACTGCATCAGCAAGTTCTTC
JMFF021M24+ AATAACAACATTACGTCCCTTGGGACCCATAGTAACTTTAACTGCATCAGCAAGTTCTTC
JMSF025A15+ AATAACAACATTACGTCCCTTGGGACCCATAGTAACTTTAACTGCATCAGCAAGTTCTTC
                      ____________________________________________________________
consensus AATAACAACATTACGTCCCTTGGGACCCATAGTAACTTTAACTGCATCAGCAAGTTCTTC
 
. : . : . : . : . : . :
JMFF042P16+ TACACCCTGAAGCATCAAGGCCCGAGCCTCCACTCCAAATCTAATATCCTTAGCAGCATA
JMSF023M09+ TACACCCTGAAGCATCAAGGCCCGAGCCTCCACTCCAAATCTAATATCCTTAGCAGCATA
JMFF021M24+ TACACCCTGAAGCATCAAGGCCCGAGCCTCCACTCCAAATCTAATATCCTTAGCAGCATA
JMSF016C10+ TGAAGCATCAAGGCCCGAGCCTCCACTCCAAATCTAATATCCTTAGCAGCATA
JMSF025A15+ TACACCCTGAAGCATCAAGGCCCGAGCCTCCACTCCAAATCTAATATCCTTAGCAGCATA
                      ____________________________________________________________
consensus TACACCCTGAAGCATCAAGGCCCGAGCCTCCACTCCAAATCTAATATCCTTAGCAGCATA
 
. : . : . : . : . : . :
JMFF042P16+ ATTTCTGCTCCAGCCTAACCTACTACCAACCTGCTGGGAGCTGCTTTTCGCAACCCTGGC
JMSF023M09+ ATTTCTGCTCCAGCCTAACCTACTACCAACCTGCTGGGAGCTGCTTTTCGCAACCCTGGC
JMFF021M24+ ATTTCTGCTCCAGCCTAACCTACTACCAACCTGCTGGGAGCTGCTTTTCGCAACCCTGGC
JMSF016C10+ ATTTCTGCTCCAGCCTAACCTACTACCAACCTGCTGGGAGCTGCTTTTCGCAACCCTGGC
JMSF025A15+ ATTTCTGCTCCAGCCTAACCTACTACCAACCTGCTGGGAGCTGCTTTTCGCAACCCTGGC
                      ____________________________________________________________
consensus ATTTCTGCTCCAGCCTAACCTACTACCAACCTGCTGGGAGCTGCTTTTCGCAACCCTGGC
 
. : . : . : . : . : . :
JMFF042P16+ TTTGGAGGCAA
JMSF023M09+ TTTGGAGGCAATGTTCGATAAGAAACGATGCATGATTTATGTATTGATAATGAGTAGATA
JMFF021M24+ TTTGGAGGCAATGTTCGATAAGAAACGATGCATGATTTATGTATTGATAATGAGTAGATA
JMSF016C10+ TTTGGAGGCAATGTTCGATAAGAAACGATGCATGATTTATGTATTGATAATGAGTAGATA
JMSF025A15+ TTTGGAGGCAATGTTCGATAAGAAACGATGCATGATTTATGTATTGATAATGAGTAGATA
                      ____________________________________________________________
consensus TTTGGAGGCAATGTTCGATAAGAAACGATGCATGATTTATGTATTGATAATGAGTAGATA
 
. : . : . : . : . : . :
JMSF023M09+ CGCTTCGTCAGAGTTTGTCAATGAGGAAGCGCACAGAAAGAAAGAAGAGAGTAGAGATC
JMFF021M24+ CGCTTCGTCAGAGTTTGTCAATGAGGAAGCGCACAGAAAGAAAGAAGAGAGTAGAGATC
JMSF016C10+ CGCTTCGTCAGAGTTTGTCAATGAGGAAGCGCACAGAAAGAAAGAAGAGAGTAG
JMSF025A15+ CGCTTCGTCAGAGTTTGTCAATGAGGAAGCGCACAGAAAGAAAGAAGAGAGTAGAGATCC
                      ____________________________________________________________
consensus CGCTTCGTCAGAGTTTGTCAATGAGGAAGCGCACAGAAAGAAAGAAGAGAGTAGAGATCC