Contig 000753:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF024K10+                                                        CATCCAGCCTGCCCA
                      ____________________________________________________________
consensus                                                          CATCCAGCCTGCCCA
 
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JMSF032L12+           TGATAAGCAATGACCGAGCAAGTAGATACAACCCCATGTCCAGTTGAGCATTTTCTCGGA
JMSF024K10+           TGATAAGCAATGACCGAGCAAGTAGATACAACCCCATGTCCAGTTGAGCATTTTCTCGGA
                      ____________________________________________________________
consensus             TGATAAGCAATGACCGAGCAAGTAGATACAACCCCATGTCCAGTTGAGCATTTTCTCGGA
 
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JMSF032L12+           AGAAGCAGCCCCGGTTTCTTCTGTGGAAACACTTCCTCCTACCAGAGGAGGGCCTTTGTA
JMSF024K10+           AGAAGCAGCCCCGGTTTCTTCTGTGGAAACACTTCCTCCTACCAGAGGAGGGCCTTTGTA
                      ____________________________________________________________
consensus             AGAAGCAGCCCCGGTTTCTTCTGTGGAAACACTTCCTCCTACCAGAGGAGGGCCTTTGTA
 
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JMSF032L12+           GAGACTGATAATGGTAGCACCTCCCACACTTGCTATGGTCCCGAGAATTTTTGCTAAACC
JMSF024K10+           GAGACTGATAATGGTAGCACCTCCCACACTTGCTATGGTCCCGAGAATTTTTGCTAAACC
                      ____________________________________________________________
consensus             GAGACTGATAATGGTAGCACCTCCCACACTTGCTATGGTCCCGAGAATTTTTGCTAAACC
 
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JMSF032L12+           ATCTCTTCTCAAGAAACTTACTTGCTCTAGCCTTAGAGCAGAAGCCATGATAAAAGTGAT
JMSF024K10+           ATCTCTTCTCAAGAAACTTACTTGCTCTAGCCTTAGAGCAGAAGCCATGATAAAAGTGAT
                      ____________________________________________________________
consensus             ATCTCTTCTCAAGAAACTTACTTGCTCTAGCCTTAGAGCAGAAGCCATGATAAAAGTGAT
 
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JMSF032L12+           TGCGGGAACTGAATTCTGCATCGTGGATGCAAAGGTTGGGGATGCATAGTACAAACCCAA
JMSF024K10+           TGCGGGAACTGAATTCTGCATCGTGGATGCAAAGGTTGGGGATGCATAGTACAAACCCAA
                      ____________________________________________________________
consensus             TGCGGGAACTGAATTCTGCATCGTGGATGCAAAGGTTGGGGATGCATAGTACAAACCCAA
 
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JMSF032L12+           GATGTAGAATCCTTGGTTTGCCGTGATTCCTATTAATGCCAGGAGGAAAAACTGAACCAA
JMSF024K10+           GATGTAGAATCCTTGGTTTGCCGTGATTCCTATTAATGCCAGGAGGAAAAACTGAACCAA
                      ____________________________________________________________
consensus             GATGTAGAATCCTTGGTTTGCCGTGATTCCTATTAATGCCAGGAGGAAAAACTGAACCAA
 
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JMSF032L12+           TAAGGAGAACGTTAGCGGGGGTCTTTCCTTCTTTTCTATGAAATAAGCAAAGGGTCCTAA
JMSF024K10+           TAAGGAGAACGTTAGCGGGGGTCTTTCCTTCTTTTCTATGAAATAAGCAAAGGGTCCTAA
                      ____________________________________________________________
consensus             TAAGGAGAACGTTAGCGGGGGTCTTTCCTTCTTTTCTATGAAATAAGCAAAGGGTCCTAA
 
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JMSF032L12+           CAAAAGCAAGGCGATGATGTTTCTGTATACAGGATAGACGATTTTGCTGACACCAATATT
JMSF024K10+           CAAAAGCAAGGCGATGATGTTTCTGTATACAGGATAGACGATTTTGCTGACACCAATATT
                      ____________________________________________________________
consensus             CAAAAGCAAGGCGATGATGTTTCTGTATACAGGATAGACGATTTTGCTGACACCAATATT
 
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JMSF032L12+           GAGTGCAAGCCTCGAGACAATATGAAATCCGGCATAGCAGAGTTGCAGAGCAAGCGAGGC
JMSF024K10+           GAGTGCAAGCCTCGAGACAATATGAAATCCGGCATAGCAGAGTTGCAGAGCAAGCGAGGC
                      ____________________________________________________________
consensus             GAGTGCAAGCCTCGAGACAATATGAAATCCGGCATAGCAGAGTTGCAGAGCAAGCGAGGC
 
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JMSF032L12+           AAGAACAAGTTTGATTTTCCCAGGTACAACAACTCCTTTTGGCTCCATATCTTTGATGTG
JMSF024K10+           AAGAACAAGTTTGATTTTCCCAGGTACAACAACTCCTTTTGGCTCCATATCTTTGATGTG
                      ____________________________________________________________
consensus             AAGAACAAGTTTGATTTTCCCAGGTACAACAACTCCTTTTGGCTCCATATCTTTGATGTG
 
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JMSF032L12+           TATTTTATTTTTGTTACTGGACTTTTGATGTTAGATCCTCTAGTACATATGTACTA    
JMSF024K10+           TATTTTATTTTTGTTACTGGACTTTTGATGTTAGATCCTCTAGTACATATGTACTATATC
                      ____________________________________________________________
consensus             TATTTTATTTTTGTTACTGGACTTTTGATGTTAGATCCTCTAGTACATATGTACTATATC