Contig 000750:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024A05+                                                             ACCCCTTTCC
                      ____________________________________________________________
consensus                                                               ACCCCTTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024A05+           TTAATCAATAAAGATTTGACAAACAAAAATACCCATCAACTCGACGTAAAACTAGGATTA
                      ____________________________________________________________
consensus             TTAATCAATAAAGATTTGACAAACAAAAATACCCATCAACTCGACGTAAAACTAGGATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024A05+           CAAAATTACCATACAACTATTCTAACATTCTAAATCATGAGGGAGGCAGAATACACGTTT
                      ____________________________________________________________
consensus             CAAAATTACCATACAACTATTCTAACATTCTAAATCATGAGGGAGGCAGAATACACGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024A05+           CAATTTATGAACCGAAAGTCCGATTTAGGGCAAAAGTGAGAGGCAACTAGTGATTCCGTA
                      ____________________________________________________________
consensus             CAATTTATGAACCGAAAGTCCGATTTAGGGCAAAAGTGAGAGGCAACTAGTGATTCCGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024A05+           ACAGAAAACCGCGGTCAACACAAGCACACAACCGATCAATCATTCGATTTCACAATAGTA
                      ____________________________________________________________
consensus             ACAGAAAACCGCGGTCAACACAAGCACACAACCGATCAATCATTCGATTTCACAATAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024A05+           ACAATTACCCTATAGAACAAATTAATTTTTAAAAAATCATGAACAAAACAAAAAAAATTG
                      ____________________________________________________________
consensus             ACAATTACCCTATAGAACAAATTAATTTTTAAAAAATCATGAACAAAACAAAAAAAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN007E05+                        CTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCGGAGGTGG
JMSF024A05+           AAAGTGAGATAACCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCGGAGGTGG
                      ____________________________________________________________
consensus             AAAGTGAGATAACCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCGGAGGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN007E05+           TGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCGCCGACGA
JMSF024A05+           TGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCGCCGACGA
                      ____________________________________________________________
consensus             TGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCGCCGACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN007E05+           GGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGGAACTGAT
JMSF024A05+           GGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGGAACTGAT
                      ____________________________________________________________
consensus             GGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGGAACTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN007E05+           TCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCCGTCGATC
JMSF024A05+           TCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCCGTCGATC
                      ____________________________________________________________
consensus             TCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCCGTCGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN007E05+           CAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGATATTCGG
JMSF024A05+           CAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGATATTCGG
                      ____________________________________________________________
consensus             CAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGATATTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN007E05+           TGATGCTTGTTGATGAAT                                          
JMSF024A05+           TGATGCTTGTTGATGAATGATGATGGGTGAGGTGAATGATATGCTGAAGCTGAATCGCCC
                      ____________________________________________________________
consensus             TGATGCTTGTTGATGAATGATGATGGGTGAGGTGAATGATATGCTGAAGCTGAATCGCCC