| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN040G05 | Sequence | 613 | 000749 (6) | gb|AAB52547.1| | 9e-38 | sporamin precursor [Ipomoea batatas] gb|ABB97540.1| sporamin A precursor [Ipomoe | |||||
| JMFS158G12 | Sequence | 374 | 000749 (6) | sp|P14716.1|SPOR2_IPOBA | 9e-13 | RecName: Full=Sporamin B; AltName: Full=Clone PIM0535; Flags: Precursor [Ipomoe | |||||
| JMSF023P19 | Sequence | 658 | 000749 (6) | gb|ABB97547.1| | 4e-48 | sporamin A precursor [Ipomoea batatas] gb|ABB97548.1| sporamin A precursor [Ipom | 735 | 000749 (6) | gb|ABB97547.1| | 5e-48 | sporamin A precursor [Ipomoea batatas] gb|ABB97548.1| sporamin A precursor [Ipom |
| JMSF041D11 | Sequence | 809 | 000749 (6) | sp|P14716.1|SPOR2_IPOBA | 6e-52 | RecName: Full=Sporamin B; AltName: Full=Clone PIM0535; Flags: Precursor [Ipomoe | 573 | 000749 (6) | gb|AAB52547.1| | 5e-37 | sporamin precursor [Ipomoea batatas] gb|ABB97540.1| sporamin A precursor [Ipomoe |
This contig is upended
. : . : . : . : . : . :
JMFN040G05+ AAAT
____________________________________________________________
consensus AAAT
. : . : . : . : . : . :
rJMSF041D11- GGACCTTTATGATTTACACAACAC
JMFN040G05+ TAAAATTGATTTATAAACTAACTGTGTTACCAAACAGGACCTTTATGATTTACACAACAC
rJMSF023P19- GGACCTTTATGATTTACACAACAC
____________________________________________________________
consensus TAAAATTGATTTATAAACTAACTGTGTTACCAAACAGGACCTTTATGATTTACACAACAC
. : . : . : . : . : . :
rJMSF041D11- AACGCAACAAGCAAGACCAGGCTTTGTTGCGTGTTTATTCTTAGACGGGTACAACGTTGT
JMFN040G05+ AACGCAACAAGCAAGACCAGGCTTTGTTGCGTGTTTATTCTTAGACGGGTACAACGTTGT
rJMSF023P19- AACGCAACAAGCAAGACCAGGCTTTGTTGCGTGTTTATTCTTAGACGGGTACAACGTTGT
JMSF041D11+ TTGCGTGTTTATTNTTAGACGGGTACAACGTTGT
____________________________________________________________
consensus AACGCAACAAGCAAGACCAGGCTTTGTTGCGTGTTTATTCTTAGACGGGTACAACGTTGT
. : . : . : . : . : . :
rJMSF041D11- CAAAAGTTGCAACGTTACTTATAGCATAGCTAGCTAGCCGGCATGGCAGCGTGTAATAAC
JMFN040G05+ CAAAAGTTGCAACGTTACTTATAGCATAGCTAGCTAGCCGGCATGGCAGCGTGTAATAAC
rJMSF023P19- CAAAAGTTGCAACGTTACTTATAGCATAGCTAGCTAGCCGGCATGGCAGCGTGTAATAAC
JMSF041D11+ CAAAAGTTGCAACGTTACTTATAGCATAGCTAGCTAGCCGGCATGGCAGCGTGTAATAAC
____________________________________________________________
consensus CAAAAGTTGCAACGTTACTTATAGCATAGCTAGCTAGCCGGCATGGCAGCGTGTAATAAC
. : . : . : . : . : . :
rJMSF041D11- TACGTACATTATTTTGCCGATGCTAGAGAAGTTTTCTTAAATAAAAGCACGAAGGGGAAA
JMFN040G05+ TACGTACATTATTTTGCCGATGCTAGAGAAGTTTTCTTAAATAAAAGCACGAAGGGGAAA
rJMSF023P19- TACGTACATTATTTTGCCGATGCTAGAGAAGTTTTCTTAAATAAAAGCACGAAGGGGAAA
JMSF041D11+ TACGTACATTATTTTGCCGATGCTAGAGAAGTTTTCTTAAATAAAAGCACGAAGGGGAAA
____________________________________________________________
consensus TACGTACATTATTTTGCCGATGCTAGAGAAGTTTTCTTAAATAAAAGCACGAAGGGGAAA
. : . : . : . : . : . :
rJMSF041D11- TCACTCAGAGCCAAACGCGTAGACTTAATGGACTGGTCATATTCTCTGCCAACGTAGTAG
JMFN040G05+ TCACTCAGAGCCAAACGCGTAGACTTAATGGACTGGTCATATTCTCTGCCAACGTAGTAG
rJMSF023P19- TCACTCAGAGCCAAACGCGTAGACTTAATGGACTGGTCATATTCTCTGCCAACGTAGTAG
JMSF041D11+ TCACTCAGAGCCAAACGCGTAGACTTAATGGACTGGTCATATTCTCTGCCAACGTAGTAG
JMSF023P19+ ACTCAGAGCCAAACGCGTAGACTTAATGGACTGGTCATATTCTCTGCCAACGTAGTAG
____________________________________________________________
consensus TCACTCAGAGCCAAACGCGTAGACTTAATGGACTGGTCATATTCTCTGCCAACGTAGTAG
. : . : . : . : . : . :
rJMSF041D11- CATTTGTCGGTGCCGGAGGGACAATAAGTGATTATATAAGTGGGGATGATGGCTTCGAGC
JMFN040G05+ CATTTGTCGGTGCCGGAGGGACAATAAGTGATTATATAAGTGGGGATGATGGCTTCGAGC
rJMSF023P19- CATTTGTCGGTGCCGGAGGGACAATAAGTGATTATATAAGTGGGGATGATGGCTTCGAGC
JMSF041D11+ CATTTGTCGGTGCCGGAGGGACAATAAGTGATTATATAAGTGGGGATGATGGCTTCGAGC
JMSF023P19+ CATTTGTCGGTGCCGGAGGGACAATAAGTGATTATATAAGTGGGGATGATGGCTTCGAGC
____________________________________________________________
consensus CATTTGTCGGTGCCGGAGGGACAATAAGTGATTATATAAGTGGGGATGATGGCTTCGAGC
. : . : . : . : . : . :
rJMSF041D11- CGCTCAATCTTGAACCGGTCGCTTTGGTTCTCGACAAACTCGTCGGACCGCACGAAATCT
JMFN040G05+ CGCTCAATCTTGAACCGGTCGCTTTGGTTCTCGACAAACTCGTCGGACCGCACGAAATCT
rJMSF023P19- CGCTCAATCTTGAACCGGTCGCTTTGGTTCTCGACAAACTCGTCGGACCGCACGAAATCT
JMSF041D11+ CGCTCAATCTTGAACCGGTCGCTTTGGTTCTCGACAAACTCGTCGGACCGCACGAAATCT
JMSF023P19+ CGCTCAATCTTGAACCGGTCGCTTTGGTTCTCGACAAACTCGTCGGACCGCACGAAATCT
____________________________________________________________
consensus CGCTCAATCTTGAACCGGTCGCTTTGGTTCTCGACAAACTCGTCGGACCGCACGAAATCT
. : . : . : . : . : . :
rJMSF041D11- TGCCCGGTACCACTGTCGTGTTGGACCCCCCAGTACAAGTTACCCGAGCAGAGAAAGTTG
JMFN040G05+ TGCCCGGTACCACTGTCGTGTTGGACCCCCCAGTACAAGTTACCTGAGCAGAGAAAGTTG
rJMSF023P19- TGCCCGGTACCACTGTCGTGTTGGACCCCCCAGTACAAGTTACCTGAGCAGAGAAAGTTG
JMSF041D11+ TGCCCGGTACCACTGTCGTGTTGGACCCCCCAGTACAAGTTACCCGAGCAGAGAAAGTTG
JMSF023P19+ TGCCCGGTACCACTGTCGTGTTGGACCCCCCAGTACAAGTTACCTGAGCAGAGAAAGTTG
____________________________________________________________
consensus TGCCCGGTACCACTGTCGTGTTGGACCCCCCAGTACAAGTTACCTGAGCAGAGAAAGTTG
. : . : . : . : . : . :
rJMSF041D11- GTGACGACGTTGAATTTGAAGCTCAAGAAAGTGGACTCGATGACATCGGTGGCTTTGGGG
JMFN040G05+ GTGACGACGTTGAATTTGAAGCTCAAGAAAGTGGACTCGATGACATCGGTGGCTTTGGGG
rJMSF023P19- GTGACGACGTTGAATTTGAAGCTCAAGAAAGTGGACTCGATGACATCGGTGGCTTTGGGG
JMSF041D11+ GTGACGACGTTGAATTTGAAGCTCAAGAAAGTGGACTCGATGACATCGGTGGCTTTGGGG
JMFS158G12+ GAAAGTGGACTCGATGACATCGGTGGCTTTGGGG
JMSF023P19+ GTGACGACGTTGAATTTGAAGCTCAAGAAAGTGGACTCGATGACATCGGTGGCTTTGGGG
____________________________________________________________
consensus GTGACGACGTTGAATTTGAAGCTCAAGAAAGTGGACTCGATGACATCGGTGGCTTTGGGG
. : . : . : . : . : . :
rJMSF041D11- TCCGCCGGCGTGATCACCACGGGGTCGGCGTAGAGCCACGAGATCACGTCGCTGGGGCAC
JMFN040G05+ TCCGCCGGCGTGATCACCACGGGGTCGGCGTAGAGCCACGAGATCACGTCGCTGGGGCAC
rJMSF023P19- TCCGCCGGCGTGATCACCACGGGGTCGGCGTAGAGCCACGAGATCACGTCGCTGGGGCAC
JMSF041D11+ TCCGCCGGCGTGATCACCACGGGGTCGGCGTAGAGCCACGAGATCACGTCGCTGGGGCAC
JMFS158G12+ TCCGCCGGCGTGATCACCACGGGGTCGGCGTAGAGCCACGAGATCACGTCGCTGGGGCAC
JMSF023P19+ TCCGCCGGCGTGATCACCACGGGGTCGGCGTAGAGCCACGAGATCACGTCGCTGGGGCAC
____________________________________________________________
consensus TCCGCCGGCGTGATCACCACGGGGTCGGCGTAGAGCCACGAGATCACGTCGCTGGGGCAC
. : . : . : . : . : . :
rJMSF041D11- T
JMFN040G05+ TTGGTTTCA
rJMSF023P19- TTGGTTTCACTTCTCCACTCGAGTTTCACTTCTCCGGCACCGGCGCCCCATGTGATGGAG
JMSF041D11+ TTGGTTTCACTTCTCCACTCGAGTTTCACTTCTCCGGCACCGGCGCCCCATGTGATGGAG
JMFS158G12+ TTGGTTTCACTTCTCCACTCGAGTTTCACTTCTCCGGCACCGGCGCCCCATGTGATGGAG
JMSF023P19+ TTGGTTTCACTTCTCCACTCGAGTTTCACTTCTCCGGCACCGGCGCCCCATGTGATGGAG
____________________________________________________________
consensus TTGGTTTCACTTCTCCACTCGAGTTTCACTTCTCCGGCACCGGCGCCCCATGTGATGGAG
. : . : . : . : . : . :
rJMSF023P19- GTTATGTTGTAAACCCCGCCGACCTGGAGCGCGTCACCGTCGGAGTCAACCACTGGAGCG
JMSF041D11+ GTTATGTTGTAAACCCCGCCGACCTGGAGCGCGTCACCGTCGGAGTCAACCACTGGAGCG
JMFS158G12+ GTTATGTTGTAAACCCCGCCGACCTGGAGCGCGTCCCCGCCGGAGTCAACCACTGGAGCG
JMSF023P19+ GTTATGTTGTAAACCCCGCCGACCTGGAGCGCGTCACCGTCGGAGTCAACCACTGGAGCG
____________________________________________________________
consensus GTTATGTTGTAAACCCCGCCGACCTGGAGCGCGTCACCGTCGGAGTCAACCACTGGAGCG
. : . : . : . : . : . :
rJMSF023P19- CCGGACGACGCTATTGGTACATCGGCGGTGCNAANGCGGTGGATGG
JMSF041D11+ CCGGACGACGCTATTGGTACATCGGCGGTGCGAAGGCGGTGGATGGGGTTGAGCGTGGCG
JMFS158G12+ CCGGACGACGCTATTGGTACATCGGCGGTGCGAAGGCGGTGGATGGGGTTGAGCGTGGCG
JMSF023P19+ CCGGACGACGCTATTGGTACATCGGCGGTGCGAAGGCGGTGGATGGGGTTGAGCGTGGCG
____________________________________________________________
consensus CCGGACGACGCTATTGGTACATCGGCGGTGCGAAGGCGGTGGATGGGGTTGAGCGTGGCG
. : . : . : . : . : . :
JMSF041D11+ CGAGTTGGGTGGGGAAGGAGGTAGAGGGAAAGTGCGAATAAGAGTGCTATGAGGGTTTTC
JMFS158G12+ CGAGTTGGGTGGGGAAGGAGGTAGAGGGAAAGTGCGAATAAGAGTGCTATGAGGGTTTTC
JMSF023P19+ CGAGTTGGGTGGGGAAGGAGGTAGAGGGAAAGTGCGAATAAGAGTGCTATGAGGGTTTTC
____________________________________________________________
consensus CGAGTTGGGTGGGGAAGGAGGTAGAGGGAAAGTGCGAATAAGAGTGCTATGAGGGTTTTC
. : . : . : . : . : . :
JMSF041D11+ ATGTT
JMFS158G12+ ATGTT
JMSF023P19+ ATGTTAGATGACAACGTGGGAGAAGAGATATGAGAGGTAATGATGTTTGTGGGTGTGTTC
____________________________________________________________
consensus ATGTTAGATGACAACGTGGGAGAAGAGATATGAGAGGTAATGATGTTTGTGGGTGTGTTC