Contig 000746:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+                                             CCACAGAGTTTGGGGCATTAGACACC
                      ____________________________________________________________
consensus                                               CCACAGAGTTTGGGGCATTAGACACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           GTCCAATAACAACTCNTTAGGTCCAAGAGATGAACCCTGGGGTCTTTAAGCCCCCCAACC
JMSF023M12+                                                          AAGCCCCCCAACC
                      ____________________________________________________________
consensus             GTCCAATAACAACTCNTTAGGTCCAAGAGATGAACCCTGGGGTCTTTAAGCCCCCCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           CCTATCAGATTAAGAACTTGTAAACAGGGGAAACACCCAGAAATGTTGTCAAGGTTTTCA
JMSF023M12+           CCTATCAGATTAAGAACTTGTAAACAGGGGAAACACCCAGAAATGTTGTCAAGGTTTTCA
                      ____________________________________________________________
consensus             CCTATCAGATTAAGAACTTGTAAACAGGGGAAACACCCAGAAATGTTGTCAAGGTTTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           TCATCCAATCTAACATACTCAAGTGTCAAACTTGTGAGCTTAGGCATTGGTTTTAAACCA
JMSF023M12+           TCATCCAATCTAACATACTCAAGTGTCAAACTTGTGAGCTTAGGCATTGGTTTTAAACCA
                      ____________________________________________________________
consensus             TCATCCAATCTAACATACTCAAGTGTCAAACTTGTGAGCTTAGGCATTGGTTTTAAACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           TTCACTGACAACCAGGCATTCTTAATCTCTAAATCAACAAGATTATAACAGTGAGAAGAA
JMSF023M12+           TTCACTGACAACCAGGCATTCTTAATCTCTAAATCAACAAGATTATAACAGTGAGAAGAA
                      ____________________________________________________________
consensus             TTCACTGACAACCAGGCATTCTTAATCTCTAAATCAACAAGATTATAACAGTGAGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           ATGACAGCAAGCACACTGGATCTCCGCCAACATGACTGAACCCAGAAATCCGAAATCGAA
JMSF023M12+           ATGACAGCAAGCACACTGGATCTCCGCCAACATGACTGAACCCAGAAATCCGAAATCGAA
                      ____________________________________________________________
consensus             ATGACAGCAAGCACACTGGATCTCCGCCAACATGACTGAACCCAGAAATCCGAAATCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           ACGGATGTCAAGCTCTGAGACACCCTCGGCAGCCACTCCTCCACAAAATTCACGTCCGTC
JMSF023M12+           ACGGATGTCAAGCTCTGAGACACCCTCGGCAGCCACTCCTCCACAAAATTCACGTCCGTC
                      ____________________________________________________________
consensus             ACGGATGTCAAGCTCTGAGACACCCTCGGCAGCCACTCCTCCACAAAATTCACGTCCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           AAGTACAAATCCTCCTCGTCTTCGACATCGTCATACGACGCCGTGCGGAGCGGCTTCTCG
JMSF023M12+           AAGTACAAATCCTCCTCGTCTTCGACATCGTCATACGACGCCGTGCGGAGCGGCTTCTCG
                      ____________________________________________________________
consensus             AAGTACAAATCCTCCTCGTCTTCGACATCGTCATACGACGCCGTGCGGAGCGGCTTCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           ACGCCGATGGATACGGACTTGACGATTCGCAATTCGGAAAGGAGTCGGCGGAAGATCTGT
JMSF023M12+           ACGCCGATGGATACGGACTTGACGATTCGCAATTCGGAAAGGAGTCGGCGGAAGATCTGT
                      ____________________________________________________________
consensus             ACGCCGATGGATACGGACTTGACGATTCGCAATTCGGAAAGGAGTCGGCGGAAGATCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           TTGAAGGGAGTGACGGAGGAGCGGGTGAGGGGGGAGCGGTACTTGGCGTAGCGGTCGAAT
JMSF023M12+           TTGAAGGGAGTGACGGAGGAGCGGGTGAGGGGGGAGCGGTACTTGGCGTAGCGGCCGAAT
                      ____________________________________________________________
consensus             TTGAAGGGAGTGACGGAGGAGCGGGTGAGGGGGGAGCGGTACTTGGCGTAGCGGTCGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           GAGCAGAGGAGGCAGACGGATTGGAGGTCCCTGGAGGTGGAGTTTAGGGTTTTGGAAGCG
JMSF023M12+           GAGCAGAGGAGGCAGACGGATTGGAGGTCCCTGGAGGTGGAGTTTAGGGTTTTGGAAGCG
                      ____________________________________________________________
consensus             GAGCAGAGGAGGCAGACGGATTGGAGGTCCCTGGAGGTGGAGTTTAGGGTTTTGGAAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           ATTCTGCAGCGAGCGAGGTCGGCCGGGTCGGTGAGTCGACTCAGGATTTCGAGGAGTAAC
JMSF023M12+           ATTCTGCAGCGAGCGAGGTCGGCCGGGTCGGTGAGTCGACTCAGGATTTCGAGGAGTAAC
                      ____________________________________________________________
consensus             ATTCTGCAGCGAGCGAGGTCGGCCGGGTCGGTGAGTCGACTCAGGATTTCGAGGAGTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF042G23+           GGTGGAGGAAGCTCGTCCATGCTCTCTCTCTCTCTCTCTCTCTCTTGGTTGGGGCAGAC 
JMSF023M12+           GGTGGAGGAAGCTCGTCCATGCTCTCTCTCTCTCTCTCTCTCTCTTGGTTGGGGCAGACG
                      ____________________________________________________________
consensus             GGTGGAGGAAGCTCGTCCATGCTCTCTCTCTCTCTCTCTCTCTCTTGGTTGGGGCAGACG