Contig 000742:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005K11Sequence377000742 (3)313008527 (6)ref|XP_007222908.1|1e-05hypothetical protein PRUPE_ppa003634mg [Prunus persica] gb|EMJ24107.1| hypotheti
JMSF020M01Sequence689000742 (3)ref|XP_009375689.1|107PREDICTED: uncharacterized protein LOC103964477 [Pyrus x bretschneideri]744008527 (6)ref|XP_009607738.1|6e-100PREDICTED: uncharacterized protein LOC104101894 isoform X1 [Nicotiana tomentosi
JMSF023G23Sequence651000742 (3)ref|XP_009375689.1|106PREDICTED: uncharacterized protein LOC103964477 [Pyrus x bretschneideri]713008527 (6)ref|XP_009607739.1|5e-84PREDICTED: uncharacterized protein LOC104101894 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF020M01+                                          CTTNGTATAGCCCTTGCCTGAAATGCACA
                      ____________________________________________________________
consensus                                            CTTNGTATAGCCCTTGCCTGAAATGCACA
 
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JMSF020M01+           ACTTGCTCTTCTAACCGGACAACCTCTTCCTCCAAAACAGCTACCTCGGCCAAAAGCTCG
JMSF023G23+                    TCTAACCGGACAACCTCTTCCTCCAAAACAGCTACCTCGGCCAAAAGCTCG
                      ____________________________________________________________
consensus             ACTTGCTCTTCTAACCGGACAACCTCTTCCTCCAAAACAGCTACCTCGGCCAAAAGCTCG
 
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JMSF020M01+           AGTGTAGATGAAGGAAGATAAAGAGGCAAGCGAGGTAGAGCTCCCAGAGGTCTTGTAAAT
JMSF023G23+           AGTGTAGATGAAGGAAGATAAGGAGGCAAGCGAGGTAGAGCTCCCAGAGGTCTTGTAAAT
                      ____________________________________________________________
consensus             AGTGTAGATGAAGGAAGATAAGGAGGCAAGCGAGGTAGAGCTCCCAGAGGTCTTGTAAAT
 
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JMSF020M01+           GCTCTCTCAAGAGCTCTATGGACATTCTCTTCATGCCTGAGTTTCTTCTTTAGCTTATCT
JMSF023G23+           GCTCTCTCAAGAGCTCTATGGACATTCTCTTCATGCCTGAGTTTCTTCTTTAGCTTATCT
                      ____________________________________________________________
consensus             GCTCTCTCAAGAGCTCTATGGACATTCTCTTCATGCCTGAGTTTCTTCTTTAGCTTATCT
 
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JMSF020M01+           ACATCTTGTAACAATGCCATCTTCTTCTCTCTGGTTGCTTTTCGCCGATTTATCATTGGT
JMSF023G23+           ACATCTTGTAACAATGCCATCTTCTTCTCTCTGGTTGCTTTTCGCCGATTTATCATTGGT
                      ____________________________________________________________
consensus             ACATCTTGTAACAATGCCATCTTCTTCTCTCTGGTTGCTTTTCGCCGATTTATCATTGGT
 
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JMSF020M01+           TTCTCTGTGTGCATTCTCTTGTTACTCTGAACTCCCATTTTTTCTTTTTCAAGCTTCCCA
JMSF023G23+           TTCTCTGTGTGCATTCTCTTGTTACTCTGAACTCCCATTTTTTCTTTTTCAAGCTTCCCA
                      ____________________________________________________________
consensus             TTCTCTGTGTGCATTCTCTTGTTACTCTGAACTCCCATTTTTTCTTTTTCAAGCTTCCCA
 
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JMSF020M01+           GGAGCCTTCATAGGCTGCAGATTGCTCCTGGCTCGAGTATTCATCTTCCTTCACTCCCCA
JMSF023G23+           GGAGCCTTCATAGGCTGCAGATTGCTCCTGGCTCGAGTATTCATCTTCCTTCACTCCCCA
                      ____________________________________________________________
consensus             GGAGCCTTCATAGGCTGCAGATTGCTCCTGGCTCGAGTATTCATCTTCCTTCACTCCCCA
 
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JMSF020M01+           GAGAAAAATAAAAAATCAGTAACCCCTGCCAGTCTTATAGGTGGTAAGCGTAAATCATGA
JMSF005K11+                                            CTTATAGGTGGTAAGCGTAAATCATGA
JMSF023G23+           GAGAAAAATAAAAAATCAGTAACCCCTGCCAGTCTTATAGGTGGTAAGCGTAAATCATGA
                      ____________________________________________________________
consensus             GAGAAAAATAAAAAATCAGTAACCCCTGCCAGTCTTATAGGTGGTAAGCGTAAATCATGA
 
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JMSF020M01+           AAGCGGGAAAAAATTCAGAGTTGAAATCAAGAATGCAAAGCCCCCACACCCAAAAGACAA
JMSF005K11+           AAGCGGGAAAAAATTCAGAGTTGAAATCAAGAATGCAAAGCCCCCACACCCAAAAGACAA
JMSF023G23+           AAGCGGGAAAAAATTCAGAGTTGAAATCAAGAATGCAAAGCCCCCACACCCAAAAGACAA
                      ____________________________________________________________
consensus             AAGCGGGAAAAAATTCAGAGTTGAAATCAAGAATGCAAAGCCCCCACACCCAAAAGACAA
 
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JMSF020M01+           AACCTGCACGAGCCTCTCTGCAATGGTTCAGTCCGATCCCAGCGCTTATTGATCTTCGCG
JMSF005K11+           AACCTGCACGAGCCTCTCTGCAATGGTTCAGTCCGATCCCAGCGCTTATTGATCTTCGCG
JMSF023G23+           AACCTGCACGAGCCTCTCTGCAATGGTTCAGTCCGATCCCAGCGCTTATTGATCTTCGCG
                      ____________________________________________________________
consensus             AACCTGCACGAGCCTCTCTGCAATGGTTCAGTCCGATCCCAGCGCTTATTGATCTTCGCG
 
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JMSF020M01+           AAAGTCAATATAGTTTTAGTTTATCAATACCATTTTCTCCTCCTCTGCTCTGTATCTATA
JMSF005K11+           AAAGTCAATATAGTTTTAGTTTATCAATACCATTTTCTCCTCCTCTGCTCTGTATCTATA
JMSF023G23+           AAAGTCAATATAGTTTTAGTTTATCAATACCATTTTCTCCTCCTCTGCTCTGTATCTATA
                      ____________________________________________________________
consensus             AAAGTCAATATAGTTTTAGTTTATCAATACCATTTTCTCCTCCTCTGCTCTGTATCTATA
 
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JMSF020M01+           TATATTTTTATATCATCATCCCCAGAGCATATCCTGCCTTCTCTCAAGAAACATTTAACC
JMSF005K11+           TATATTTTTATATCATCATCCCCAGAGCATATCCTGCCTTCTCTCAAGAAACATTTAACC
JMSF023G23+           TATATTTTTATATCATCATCCCCAGAGCATATCCTGCCTTCTCTCAAGAAACATCTAACC
                      ____________________________________________________________
consensus             TATATTTTTATATCATCATCCCCAGAGCATATCCTGCCTTCTCTCAAGAAACATTTAACC