| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS022E12 | Sequence | 590 | 000741 (9) | ref|XP_009803658.1| | 1e-56 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | |||||
| JMFS032B04 | Sequence | 516 | 000741 (9) | ref|XP_009803658.1| | 9e-50 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | |||||
| JMFS055B12 | Sequence | 641 | 000741 (9) | ref|XP_009803658.1| | 9e-67 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | |||||
| JMFS067D09 | Sequence | 625 | 000741 (9) | ref|XP_009803658.1| | 9e-64 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | |||||
| JMFS068C03 | Sequence | 636 | 000741 (9) | ref|XP_009803658.1| | 1e-63 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | |||||
| JMFS126E09 | Sequence | 618 | 000741 (9) | ref|XP_009803658.1| | 2e-60 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | |||||
| JMFS132F08 | Sequence | 616 | 000741 (9) | ref|XP_009803658.1| | 2e-66 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | |||||
| JMSF022N09 | Sequence | 716 | 000741 (9) | ref|XP_009803658.1| | 2e-63 | PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris] | 750 | 000741 (9) | ref|XP_009622249.1| | 8e-16 | PREDICTED: TMV resistance protein N-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF022N09- CCGATTTTGAATCGTAACCTG
____________________________________________________________
consensus CCGATTTTGAATCGTAACCTG
. : . : . : . : . : . :
rJMSF022N09- CAGAATTGTCCATACTGGTTTCGGTTCGATTGCTACAATGTACGGTTAGGTTCAAACGGA
____________________________________________________________
consensus CAGAATTGTCCATACTGGTTTCGGTTCGATTGCTACAATGTACGGTTAGGTTCAAACGGA
. : . : . : . : . : . :
rJMSF022N09- ACCGTAGTCATTCATACATATAAGCAATAATTTGTTGGGGAAGAAAAATAAATGAAATAC
____________________________________________________________
consensus ACCGTAGTCATTCATACATATAAGCAATAATTTGTTGGGGAAGAAAAATAAATGAAATAC
. : . : . : . : . : . :
rJMSF022N09- TTATTTTAAAGGTAAAAATGTCCATCTAAAAGGGGGAAGAACCGTTATTTTTAACATAAC
____________________________________________________________
consensus TTATTTTAAAGGTAAAAATGTCCATCTAAAAGGGGGAAGAACCGTTATTTTTAACATAAC
. : . : . : . : . : . :
rJMSF022N09- TTAGGGGTCAAATGTATATACTTGAATAACTCAAAAAAAACAAAAAAAAAGTATTATAAG
____________________________________________________________
consensus TTAGGGGTCAAATGTATATACTTGAATAACTCAAAAAAAACAAAAAAAAAGTATTATAAG
. : . : . : . : . : . :
rJMSF022N09- CATATAATTCAGGAGGAAAATATCATATTATTTTTTTCTTTTTAAATTATGTCTAAACCT
____________________________________________________________
consensus CATATAATTCAGGAGGAAAATATCATATTATTTTTTTCTTTTTAAATTATGTCTAAACCT
. : . : . : . : . : . :
rJMSF022N09- TACAAAACTTTTTCNCTTTCCTAAACTTTACTCTATTTTTAAATTTATATTATACNCTAT
____________________________________________________________
consensus TACAAAACTTTTTCNCTTTCCTAAACTTTACTCTATTTTTAAATTTATATTATACNCTAT
. : . : . : . : . : . :
rJMSF022N09- CTTATATAANCCTTTGAAAATATTTTTCTCAAAATTTAATTGATCGAAAACCACTAATAA
____________________________________________________________
consensus CTTATATAANCCTTTGAAAATATTTTTCTCAAAATTTAATTGATCGAAAACCACTAATAA
. : . : . : . : . : . :
rJMSF022N09- GAGTGTTGAGTGTTGAGTGGTGGCAATTATTGAAACTGATGGAGTTGAAGTTATGGTTAA
JMSF022N09+ TGAGTGGTGGCAATTANTGNAACTGATGGAGTTGAAGTTATGGTTAA
____________________________________________________________
consensus GAGTGTTGAGTGTTGAGTGGTGGCAATTATTGAAACTGATGGAGTTGAAGTTATGGTTAA
. : . : . : . : . : . :
rJMSF022N09- AGCAAGCTTACCCATCCTCCATATTCTTGACGTCAAAGCCAGATGTATTTGCCACTGTAA
JMFS068C03+ GCCCATCCTCCATATTCTTGACGTCAAAGCCAGATGTATTTGCCACTGTAA
JMFS055B12+ CCCATCCTCCATATTCTTGACGTCAAAGCCAGATGTATTTGCCACTGTAA
JMFS067D09+ GCCCATCCTCCATATTCTTGACGTCAAAGCCAGATGTATTTGCCACTGTAA
JMFS126E09+ TTGACGTCAAAGCCAGATGTATTTGCCACTGTAA
JMFS132F08+ CCCATCCTCCATATTCTTGACGTCAAAGCCAGATGTATTGNCCACTGTAA
JMFS022E12+ TGTAA
JMSF022N09+ AGCAAGCTTACCCATCCTCCATATTCTTGACGTCAAAGCCAGATGTATTTGCCACTGTAA
____________________________________________________________
consensus AGCAAGCTTACCCATCCTCCATATTCTTGACGTCAAAGCCAGATGTATTTGCCACTGTAA
. : . : . : . : . : . :
rJMSF022N09- ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
JMFS068C03+ ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
JMFS055B12+ ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
JMFS067D09+ ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
JMFS126E09+ ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
JMFS132F08+ ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
JMFS022E12+ ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
JMFS032B04+ GT
JMSF022N09+ ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
____________________________________________________________
consensus ACAAAGCATGTCTCCACTGCTTGATCTTCTCTTCCTCGAACTTGGCTTCCTTGTGTTTGT
. : . : . : . : . : . :
rJMSF022N09- CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTANA
JMFS068C03+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
JMFS055B12+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
JMFS067D09+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
JMFS126E09+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
JMFS132F08+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
JMFS022E12+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
JMFS032B04+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
JMSF022N09+ CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
____________________________________________________________
consensus CAAAAGCCTCTTTGTAAGTTCCTCGCTGTTTTCTTACGTCGGAGGGGTCGACGCCGTAGA
. : . : . : . : . : . :
rJMSF022N09- ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTT
JMFS068C03+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
JMFS055B12+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
JMFS067D09+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
JMFS126E09+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
JMFS132F08+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
JMFS022E12+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
JMFS032B04+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
JMSF022N09+ ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
____________________________________________________________
consensus ACACCGGAAACAGCGTCTTCGCCGGCTGCTTCTCCGCGTACTCCACCGCTTTCACAAGCT
. : . : . : . : . : . :
JMFS068C03+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
JMFS055B12+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
JMFS067D09+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
JMFS126E09+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
JMFS132F08+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
JMFS022E12+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
JMFS032B04+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
JMSF022N09+ CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
____________________________________________________________
consensus CATCCAGACACCAGCTGGAGTTGGCGTAATTTGGGGAGAAGATAACCACTACGAACTTGG
. : . : . : . : . : . :
JMFS068C03+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
JMFS055B12+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
JMFS067D09+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
JMFS126E09+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
JMFS132F08+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
JMFS022E12+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
JMFS032B04+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
JMSF022N09+ ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
____________________________________________________________
consensus ACCCCTTCACCGCGTTGTCGAGCTCCGGCGAGATGGACTTTCCCCTCTTCAGTTCGTCGT
. : . : . : . : . : . :
JMFS068C03+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
JMFS055B12+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
JMFS067D09+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
JMFS126E09+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
JMFS132F08+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
JMFS022E12+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
JMFS032B04+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
JMSF022N09+ CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
____________________________________________________________
consensus CGTCTCTGAAGGTGTGGATCCCTTTCTCGTGCAGAGTGGCGTAGAGGTGATCCACGAAAC
. : . : . : . : . : . :
JMFS068C03+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
JMFS055B12+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
JMFS067D09+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
JMFS126E09+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
JMFS132F08+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
JMFS022E12+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
JMFS032B04+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
JMSF022N09+ CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
____________________________________________________________
consensus CCTTGCGGGTGTCTTCGCCTCTGAAGCTCAAGAAAACGTCGTACAACCATTTAGGTGTTT
. : . : . : . : . : . :
JMFS068C03+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
JMFS055B12+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
JMFS067D09+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
JMFS126E09+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
JMFS132F08+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
JMFS022E12+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
JMFS032B04+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
JMSF022N09+ CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
____________________________________________________________
consensus CAGTGCCGCCGCCGCCGCCGCTCTCTGAAGACGACGACGACATATTTATTCAGATCGAGG
. : . : . : . : . : . :
JMFS068C03+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
JMFS055B12+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
JMFS067D09+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
JMFS126E09+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
JMFS132F08+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
JMFS022E12+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
JMFS032B04+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
JMSF022N09+ TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
____________________________________________________________
consensus TTAACAACGCTAGCTAATCGGAAATTATGCCGGACCGTACCGGAGCTCTGTTTTTCTTTA
. : . : . : . : . : . :
JMFS068C03+ ACCAGGAATTATTATTATACTAGAGAAGATAGACTTTGATTTTA
JMFS055B12+ ACCAGGAATTATTATTATACTAGAGAAGATAGACTTTGA
JMFS067D09+ ACCAGGAATTATTATTATACTAGAGAAGATAGAC
JMFS126E09+ ACCAGGAATTATTATTATACTAGAGAAGATAGACTTTGATTTTA
JMFS132F08+ ACCAGGAA
JMFS022E12+ ACCAGGAATTATTATTATACTAGAGAAGATAGACTTTGATTTTA
JMFS032B04+ ACCAGGAATTATTATTATACTAGAGAAGATAGAC
JMSF022N09+ ACCAGGAATTATTATTATACTAGAGAAGATAGACTTTGATTTTAGGCTTTGCATAGATGC
____________________________________________________________
consensus ACCAGGAATTATTATTATACTAGAGAAGATAGACTTTGATTTTAGGCTTTGCATAGATGC