Contig 000740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047P15Sequence631000740 (3)ref|XP_004230684.1|5e-80PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum]580004144 (3)ref|XP_004136933.1|2e-76PREDICTED: magnesium transporter MRS2-3-like [Cucumis sativus] ref|XP_004159919.
JMSF022L24Sequence643000740 (3)ref|XP_004230684.1|2e-79PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum]808004144 (3)ref|XP_009603566.1|3e-112PREDICTED: magnesium transporter MRS2-3 isoform X1 [Nicotiana tomentosiformis]
JMSF027F13Sequence683000740 (3)ref|XP_004230684.1|5e-62PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum]739021478ref|XP_009603566.1|2e-69PREDICTED: magnesium transporter MRS2-3 isoform X1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF027F13+                                                                      C
                      ____________________________________________________________
consensus                                                                        C
 
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JMSF027F13+           AGAATTCAAAACAATTTTATAAAGGCAAATTTAATAATTCATGCTAAAGTATTACAGTGC
                      ____________________________________________________________
consensus             AGAATTCAAAACAATTTTATAAAGGCAAATTTAATAATTCATGCTAAAGTATTACAGTGC
 
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JMSF027F13+           TGTAACAGTCTAACAGAAATAATAGCAATTCAGAAATTTAAAGAAATTACTTCTATCAGT
                      ____________________________________________________________
consensus             TGTAACAGTCTAACAGAAATAATAGCAATTCAGAAATTTAAAGAAATTACTTCTATCAGT
 
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JMSF027F13+           TTCTTTCAACTGTGAACATTTTAAGCCAATATATATATACGCATTTCGTATAGATAAAGA
                      ____________________________________________________________
consensus             TTCTTTCAACTGTGAACATTTTAAGCCAATATATATATACGCATTTCGTATAGATAAAGA
 
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JMFF047P15+               CCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
JMSF027F13+           GAAACCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
JMSF022L24+               CCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
                      ____________________________________________________________
consensus             GAAACCTGGGAGTTGGTAGCTTGGTGGTGACGCAGAATTCTGTGCTGGAGCTCATCGACG
 
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JMFF047P15+           AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
JMSF027F13+           AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
JMSF022L24+           AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
                      ____________________________________________________________
consensus             AAAGGAGCAACAGAAGGGTCTCTAGAATTGAGGAGAAGGACCTCTTGTGCTGTAATAATG
 
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JMFF047P15+           GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
JMSF027F13+           GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
JMSF022L24+           GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
                      ____________________________________________________________
consensus             GCCTTGATATGCTCCAGATTGATGACGATTGCCCGCTCACGGCCGAGCACAGTGGAAGGG
 
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JMFF047P15+           TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
JMSF027F13+           TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
JMSF022L24+           TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
                      ____________________________________________________________
consensus             TAAGACAGAAGTGGGTCCAGAATACGAAGATCCCGGGCCGGAAGCCCAGTCCGGCGCATG
 
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JMFF047P15+           ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
JMSF027F13+           ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
JMSF022L24+           ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
                      ____________________________________________________________
consensus             ATAGCATGTTTTCCGACCTCCACCACCTGCGCTTGCCCAGTAGAGTCCAGGAGAAGCCAT
 
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JMFF047P15+           GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
JMSF027F13+           GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
JMSF022L24+           GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
                      ____________________________________________________________
consensus             GGCCGGACCCCGGCAGCCTTCTTTCGCAGCCCACCGCCGACGATTACGCCTCCCGGCAAG
 
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JMFF047P15+           GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
JMSF027F13+           GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
JMSF022L24+           GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
                      ____________________________________________________________
consensus             GGATTGTTAGTGCGGAGGGGATCTCCATCGTCGACCGGCGAATCGGCGTTGAGCTTCGCC
 
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JMFF047P15+           GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
JMSF027F13+           GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
JMSF022L24+           GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
                      ____________________________________________________________
consensus             GGAGGATTGCCCTTCATCAGTGTTCGTAACTGAACTTTTCAGTTAAAAAGTAGGATCGGC
 
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JMFF047P15+           AGTTCGGCACCTTTC                                             
JMSF027F13+           AGTTCGGCACCTTTC                                             
JMSF022L24+           AGTTCGGCACCTTTCTCCCAGAAAATTACCAAAAATACGAGTCATTTATTTTTATTTTTC
                      ____________________________________________________________
consensus             AGTTCGGCACCTTTCTCCCAGAAAATTACCAAAAATACGAGTCATTTATTTTTATTTTTC