Contig 000739:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I01Sequence530000739 (3)ref|XP_009796663.1|1e-72PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]748002532 (4)ref|XP_009777302.1|4e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMSF022I10Sequence631000739 (3)ref|XP_009796663.1|1e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]768002532 (4)ref|XP_009777302.1|2e-115PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl
JMSF038K02Sequence631000739 (3)ref|XP_009796663.1|1e-92PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana sylvestris]894002532 (4)ref|XP_009777302.1|9e-112PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like, partial [Nicotiana syl

Alignment

This contig is upended


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JMSF038K02+                                        GCGCCGTGTTGGGATTCCCTTGGAGTACTAG
JMSF022I10+                                        GCGCCGTGTTGGGATTCCCTTGGAGTACTAG
                      ____________________________________________________________
consensus                                          GCGCCGTGTTGGGATTCCCTTGGAGTACTAG
 
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JMSF038K02+           CTGCTCGTACTCCAGCTCCCCCAGGCGGATCCCGGTGGGGGTATCCACGTCGTCGATCAC
JMSF022I10+           CTGCTCGTACTCCAGCTCCCCCAGGCGGATCCCGGTGGGGGTATCCACGTCGTCGATCAC
                      ____________________________________________________________
consensus             CTGCTCGTACTCCAGCTCCCCCAGGCGGATCCCGGTGGGGGTATCCACGTCGTCGATCAC
 
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JMSF038K02+           AACCACCAAGGGCATTTGCGTATTCTCCTCCATCAACATCTCCATCGCCTTCCCGGCCTT
JMFF009I01+             CCACCAAGGGCATTTGCGTATTCTCCTCCATCAACATCTCCATCGCCTTCCCGGCCTT
JMSF022I10+           AACCACCAAGGGCATTTGCGTATTCTCCTCCATCAACATCTCCATCGCCTTCCCGGCCTT
                      ____________________________________________________________
consensus             AACCACCAAGGGCATTTGCGTATTCTCCTCCATCAACATCTCCATCGCCTTCCCGGCCTT
 
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JMSF038K02+           CTCCACATATTCATAGTCCACGAAGAACACCTTCGCCTCCGAGTGCCGGAGAATGGTGGC
JMFF009I01+           CTCCACATATTCATAGTCCACGAAGAACACCTTCGCCTCCGAGTGCCGGAGAATGGTGGC
JMSF022I10+           CTCCACATATTCATAGTCCACGAAGAACACCTTCGCCTCCGAGTGCCGGAGAATGGTGGC
                      ____________________________________________________________
consensus             CTCCACATATTCATAGTCCACGAAGAACACCTTCGCCTCCGAGTGCCGGAGAATGGTGGC
 
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JMSF038K02+           AATGTTCTTCGCATCCAGCCTCGTGTTTATGGTGTTCAGCACCGCCCCTGCCATCGGCAC
JMFF009I01+           AATGTTCTTCGCATCCAGCCTCGTGTTTATGGTGTTCAGCACCGCCCCTGCCATCGGCAC
JMSF022I10+           AATGTTCTTCGCATCCAGCCTCGTGTTTATGGTGTTCAGCACCGCCCCTGCCATCGGCAC
                      ____________________________________________________________
consensus             AATGTTCTTCGCATCCAGCCTCGTGTTTATGGTGTTCAGCACCGCCCCTGCCATCGGCAC
 
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JMSF038K02+           CGCGAAATGCATCTCGTACATTGCCGGAACATTCGGCGCCAACACCGAAACAACATCGTT
JMFF009I01+           CGCGAAATGCATCTCGTACATTGCCGGAACATTCGGCGCCAACACCGAAACAACATCGTT
JMSF022I10+           CGCGAAATGCATCTCGTACATTGCCGGAACATTCGGCGCCAACACCGAAACAACATCGTT
                      ____________________________________________________________
consensus             CGCGAAATGCATCTCGTACATTGCCGGAACATTCGGCGCCAACACCGAAACAACATCGTT
 
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JMSF038K02+           CTTGACAACGTTGAGAGCCCGGAGAGAGGAGGCGAGACGGCAGCAGCGGTCGTAGGTCTG
JMFF009I01+           CTTGACAACGTTGAGAGCCCGGAGAGAGGAGGCGAGACTGCAGCAGCGGTCGTAGGTCTG
JMSF022I10+           CTTGACAACGTTGAGAGCCCGGAGAGAGGAGGCGAGACGGCAGCAGCGGTCGTAGGTCTG
                      ____________________________________________________________
consensus             CTTGACAACGTTGAGAGCCCGGAGAGAGGAGGCGAGACGGCAGCAGCGGTCGTAGGTCTG
 
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JMSF038K02+           GCGCCACGTGAAGCTGACGCCGCCGTAGATGACGGATTTGCGGTCGGCATAGCATTTGGA
JMFF009I01+           GCGCCACGTGAAGCTGACGCCGCCGTAGATGACGGATTTGCGGTCGGCATAGCATTTGGA
JMSF022I10+           GCGCCACGTGAAGCTGACGCCGCCGTAGATGACGGATTTGCGGTCGGCATAGCATTTGGA
                      ____________________________________________________________
consensus             GCGCCACGTGAAGCTGACGCCGCCGTAGATGACGGATTTGCGGTCGGCATAGCATTTGGA
 
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JMSF038K02+           AGCCCTCAGCAAGAAAGTGGTGGGAGTGAGAGGGACATAATTTGCTCCACATTTTGGCAG
JMFF009I01+           AGCCCTCAGCAAGAAAGTGGTGGGAGTGAGAGGGACATAATTTGCTCCACATTTTGGCAG
JMSF022I10+           AGCCCTCAGCAAGAAAGTGGTGGGAGTGAGAGGGACATAATTTGCTCCACATTTTGGCAG
                      ____________________________________________________________
consensus             AGCCCTCAGCAAGAAAGTGGTGGGAGTGAGAGGGACATAATTTGCTCCACATTTTGGCAG
 
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JMSF038K02+           TCTATCCATCTCCAGACAGGGTTGGATATAGGATATATTTCTGGTCGATCGAGGAAATTA
JMFF009I01+           TCTATCCATCTCCAGACAGGGTTGGATATAGGATATATTTCTGGTCGATCGAGGAAATTA
JMSF022I10+           TCTATCCATCTCCAGACAGGGTTGGATATAGGATATATTTCTGGTCGATCGAGGAAATTA
                      ____________________________________________________________
consensus             TCTATCCATCTCCAGACAGGGTTGGATATAGGATATATTTCTGGTCGATCGAGGAAATTA
 
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JMSF038K02+           AGGATTGAAAACAATTGGATGGGGTTGTTAAGAAAGATGAGTTCTTGTGGATAGGTT   
JMFF009I01+           AGGATTGAAAACAATTGGATGGGGTTGTTAAGAAAGATGAGTTCTTGTGGAT        
JMSF022I10+           AGGATTGAAAACAATTGGATGGGGTTGTTAAGAAAGATGAGTTCTTGTGGATAGGTTTCC
                      ____________________________________________________________
consensus             AGGATTGAAAACAATTGGATGGGGTTGTTAAGAAAGATGAGTTCTTGTGGATAGGTTTCC