| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF050I05 | Sequence | 616 | 000737 (9) | gb|AAV88065.1| | 2e-13 | leucine-rich repeat protein [Ipomoea batatas] | 632 | 011217 (2) | emb|CBI16563.3| | 3e-65 | unnamed protein product [Vitis vinifera] |
| JMFF050K05 | Sequence | 454 | 000737 (9) | gb|AAV88065.1| | 3e-12 | leucine-rich repeat protein [Ipomoea batatas] | 464 | 011217 (2) | emb|CBI16563.3| | 2e-32 | unnamed protein product [Vitis vinifera] |
| JMFS014D10 | Sequence | 555 | 000737 (9) | gb|AAV88065.1| | 3e-13 | leucine-rich repeat protein [Ipomoea batatas] | |||||
| JMFS077H10 | Sequence | 626 | 000737 (9) | gb|AAV88065.1| | 1e-17 | leucine-rich repeat protein [Ipomoea batatas] | |||||
| JMFS097C04 | Sequence | 627 | 000737 (9) | gb|AAV88065.1| | 2e-18 | leucine-rich repeat protein [Ipomoea batatas] | |||||
| JMFS101D11 | Sequence | 642 | 000737 (9) | gb|AAV88065.1| | 2e-21 | leucine-rich repeat protein [Ipomoea batatas] | |||||
| JMFS139C03 | Sequence | 618 | 000737 (9) | gb|AAV88065.1| | 8e-16 | leucine-rich repeat protein [Ipomoea batatas] | |||||
| JMSF022D21 | Sequence | 302 | 000737 (9) | 772 | 001394 (6) | ref|XP_009762701.1| | 6e-21 | PREDICTED: putative late blight resistance protein homolog R1A-10 [Nicotiana sy | |||
| JMSF029C01 | Sequence | 304 | 000737 (9) | 688 | 001394 (6) | ref|XP_004248174.1| | 2e-16 | PREDICTED: putative late blight resistance protein homolog R1B-12 [Solanum lyco | |||
This contig is upended
. : . : . : . : . : . :
JMFS097C04+ TCCCCCCCATTCCCCAAATTGAGATAACTTGTCGTTCGTC
JMFS077H10+ TCCCCCCCATTCCCCAAATTGAGATAACTTGTCGTTCGTC
JMFS139C03+ ATTCCCCAAATTGAGATAACTTGTCGTTCGTC
JMFS101D11+ AGTAGTTTTACCGATCCCCCCCATTCCCCAAATTGAGATAACTTGTCGTTCGTC
____________________________________________________________
consensus AGTAGTTTTACCGATCCCCCCCATTCCCCAAATTGAGATAACTTGTCGTTCGTC
. : . : . : . : . : . :
JMFS097C04+ ACAGTCGCGGCCGAGTTTTTCCATTATATCCTTCAATTCCTCACGGTGTCCGACCATTTC
JMFS077H10+ ACAGTCGCGGCCGAGTTTTTCCATTATATCCTTCAATTCCTCACGGTGTCCGACCATTTC
JMFS139C03+ ACAGTCGCGGCCGAGTTTTTCCATTATATCCTTCAATTCCTCACGGTGTCCGACCATTTC
JMFS101D11+ ACAGTCGCGGCCGAGTTTTTCCATTATATCCTTCAATTCCTCACGGTGTCCGACCATTTC
JMFS014D10+ ATCCTTCAATTCCTCACGGTGTCCGACCATTTC
JMFF050I05+ CAGTCGCGGCCGAGTTTTTCCATTATATCCTTCAATTCCTCACGGTGTCCGACCATTTC
____________________________________________________________
consensus ACAGTCGCGGCCGAGTTTTTCCATTATATCCTTCAATTCCTCACGGTGTCCGACCATTTC
. : . : . : . : . : . :
JMFS097C04+ TTCCCTCTGCTGTGTAAGCGGTGAAGTGGTGGTGTCCTGGTCGGAAGGATGTTTTGACGG
JMFS077H10+ TTCCCTCTGCTGTGTAAGCGGTGAAGTGGTGGTGTCCTGGTCGGAAGGATGTTTTGACGG
JMFS139C03+ TTCCCTCTGCTGTGTAAGCGGTGAAGTGGTGGTGTCCTGGTCGGAAGGATGTTTTGACGG
JMFS101D11+ TTCCCTCTGCTGTGTAAGCGGTGAAGTGGTGGTGTCCTGGTCGGAAGGATGTTTTGACGG
JMFS014D10+ TTCCCTCTGCTGTGTAAGCGGTGAAGTGGTGGTGTCCTGGTCGGAAGGATGTTTTGACGG
JMFF050I05+ TTCCCTCTGCTGTGTAAGCGGTGAAGTGGTGGTGTCCTGGTCGGAAGGATGTTTTGACGG
____________________________________________________________
consensus TTCCCTCTGCTGTGTAAGCGGTGAAGTGGTGGTGTCCTGGTCGGAAGGATGTTTTGACGG
. : . : . : . : . : . :
JMFS097C04+ ATCGGCTAAGGAATCAGCTAACGAATCATCACGCGCGTTCACAATCCTCAACAACTCACC
JMFS077H10+ ATCGGCTAAGGAATCAGCTAACGAATCATCACGCGCGTTCACAATCCTCAACAACTCACC
JMFS139C03+ ATCGGCTAAGGAATCAGCTAACGAATCATCACGCGCGTTCACAATCCTCAACAACTCACC
JMFS101D11+ ATCGGCTAAGGAATCAGCTAACGAATCATCACGCGCGTTCACAATCCTCAACAACTCACC
JMFS014D10+ ATCGGCTAAGGAATCAGCTAACGAATCATCACGCGCGTTCACAATCCTCAACAACTCACC
JMFF050K05+ GAATCATCACGCGCGTTCACAATCCTCAACAACTCACA
JMFF050I05+ ATCGGCTAAGGAATCAGCTAACGAATCATCACGCGCGTTCACAATCCTCAACAACTCACC
____________________________________________________________
consensus ATCGGCTAAGGAATCAGCTAACGAATCATCACGCGCGTTCACAATCCTCAACAACTCACC
. : . : . : . : . : . :
JMFS097C04+ TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
JMFS077H10+ TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
JMFS139C03+ TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
JMFS101D11+ TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
JMFS014D10+ TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
JMFF050K05+ TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
JMFF050I05+ TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
____________________________________________________________
consensus TAACTGAGTGCTGATTTCCCCAATGCTCCGATGGAGTTCTCTGCAAGCGTCTTCTTTCCG
. : . : . : . : . : . :
JMFS097C04+ CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
JMFS077H10+ CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
JMFS139C03+ CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
JMFS101D11+ CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
JMFS014D10+ CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
JMFF050K05+ CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
JMFF050I05+ CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
JMSF029C01+ TC
JMSF022D21+ TC
____________________________________________________________
consensus CTTTGCATCTTTCGCCAGAAGAATGTTTCTGAGCTGAATCTCAAGCTTGTTTTCTGATTC
. : . : . : . : . : . :
JMFS097C04+ AAGAGCAAAGCTCTTGATATTGACTTCCACTTGTTTGATTTCAGCATCCTCGTGGGCTTT
JMFS077H10+ AAGAGCAAAGCTCTTGATATTGACTTCCACTTGTTTGATTTCAGCATCCTCGTGGGCTTT
JMFS139C03+ AAGAGCAAAGCTCTTGATATTGACTTCCACTTGTTTGATTTCAGCATCCTCGTGGGCTTT
JMFS101D11+ AAGAGCAAAGCTCTTGATATTGACTTCCACTTGTTTGATTTCAGCATCCTCGTGGGCTTT
JMFS014D10+ AAGAGCAAAGCTCTTGATATTGACTTCCACTTGTTTGATTTCAGCATCCTCGTGGGCTTT
JMFF050K05+ AAGAGCAAAGCTCTTGATATTGACTTCCACTCGTTTGATTTCAGCATCCTCGTGGGCTCT
JMFF050I05+ AAGAGCAAAGCTCTTGATATTGACTTCCACTTGTTTGATTTCAGCATCCTCGTGGGCTTT
JMSF029C01+ AAGAGCAAAGNTCTNGATATNGANTTCCACNNGTNTGANTTCAGCATCCTCGTGGGCTTT
JMSF022D21+ AAGAGCAAAGCTCTNGATATNGANTTCCACTNGTNTGANTTCAGCATCNTCGTGGGCTNT
____________________________________________________________
consensus AAGAGCAAAGCTCTTGATATTGACTTCCACTTGTTTGATTTCAGCATCCTCGTGGGCTTT
. : . : . : . : . : . :
JMFS097C04+ GATATAATATTTGTCCAGAAAGGCTTGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
JMFS077H10+ GATATAATATTTGTCCAGAAAGGCTTGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
JMFS139C03+ GATATAATATTTGTCCAGAAAGGCTTGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
JMFS101D11+ GATATAATATTTGTCCAGAAAGGCTTGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
JMFS014D10+ GATATAATATTTGTCCAGAAAGGCTTGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
JMFF050K05+ GATATAATATTTGTCCAGAAAGGCTCGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
JMFF050I05+ GATATAATATTTGTCCAGAAAGGCTTGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
JMSF029C01+ GATATAATATTTGTCCAGAAAGGCTNGCAAAANNGCAAGGTTTTGAAGAAGAGTCNTCAT
JMSF022D21+ GATATAATATNTGTCCAGAAAGGCNNGCAAAANNGCAAGGTTTTGAAGAAGAGTCCTCAT
____________________________________________________________
consensus GATATAATATTTGTCCAGAAAGGCTTGCAAAATTGCAAGGTTTTGAAGAAGAGTCCTCAT
. : . : . : . : . : . :
JMFS097C04+ CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
JMFS077H10+ CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
JMFS139C03+ CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
JMFS101D11+ CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
JMFS014D10+ CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
JMFF050K05+ GTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
JMFF050I05+ CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
JMSF029C01+ NTGCTGTAGATCATCAGGAAGCACCCGAGGAGNGGGTNGCNGGATCTCAAACTCCANTGT
JMSF022D21+ CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTNGCTGGATCTCAAACTCCANTGT
____________________________________________________________
consensus CTGCTGTAGATCATCAGGAAGCACCCGAGGAGTGGGTCGCTGGATCTCAAACTCCATTGT
. : . : . : . : . : . :
JMFS097C04+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMFS077H10+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMFS139C03+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMFS101D11+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMFS014D10+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMFF050K05+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMFF050I05+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMSF029C01+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCAC
JMSF022D21+ TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCNCCTCTCTCTCTCTCTCTCTCTCT
____________________________________________________________
consensus TGCCCTCAGAGAAGCTACCCCAACATAAGCCATCTCACCTCTCTCTCTCTCTCTCTCTCT
. : . : . : . : . : . :
JMSF022D21+ CTCTCTCTCTCTCCAGTGTTTCCCTGTAATAGCTATGAGAGAGAGAGACTGAAACCTTTC
____________________________________________________________
consensus CTCTCTCTCTCTCCAGTGTTTCCCTGTAATAGCTATGAGAGAGAGAGACTGAAACCTTTC