Contig 000730:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021I01Sequence691000730 (4)gb|KCW55915.1|2e-25hypothetical protein EUGRSUZ_I01713 [Eucalyptus grandis]759002893 (4)ref|XP_010029073.1|110PREDICTED: uncharacterized protein LOC104419196 [Eucalyptus grandis] gb|KCW55917
JMSF023K11Sequence653000730 (4)gb|KCW55915.1|6e-25hypothetical protein EUGRSUZ_I01713 [Eucalyptus grandis]
JMSF029E13Sequence686000730 (4)gb|KCW55915.1|2e-25hypothetical protein EUGRSUZ_I01713 [Eucalyptus grandis]711002893 (4)ref|XP_002324001.2|3e-19hypothetical protein POPTR_0017s10720g [Populus trichocarpa] gb|EEF04134.2| hypo
JMSF031L05Sequence656000730 (4)gb|KCW55915.1|1e-25hypothetical protein EUGRSUZ_I01713 [Eucalyptus grandis]571002893 (4)ref|XP_004288435.1|62.4PREDICTED: uncharacterized protein LOC101298064 [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


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JMSF029E13+                                         CCTTCAGTAGCTTCAACGGTTCAGCNGGAG
JMSF021I01+                                        TCCTTCAGTAGCTTCAACGGTTCAGCTGGAG
                      ____________________________________________________________
consensus                                          TCCTTCAGTAGCTTCAACGGTTCAGCTGGAG
 
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JMSF029E13+           TTTNGGAACCAGAGGTGTTGAGCTGCGATGCCCAAACAAGAACAGCTTGAGTGATGTGGG
JMSF031L05+                  ACCAGAGGTGTTGAGCTGCGATGCCCAAACAAGAACAGCTTGAGTGATGTGGG
JMSF023K11+                  ACCAGAGGTGTTGAGNTGCGATGCCCAAACAAGAACAGCTTGAGTGATGTGGG
JMSF021I01+           TTTTGGAACCAGAGGTGTTGAGCTGCGATGCCCAAACAAGAACAGCTTGAGTGATGTGGG
                      ____________________________________________________________
consensus             TTTTGGAACCAGAGGTGTTGAGCTGCGATGCCCAAACAAGAACAGCTTGAGTGATGTGGG
 
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JMSF029E13+           CAATAGCCTTTGGTTGGAGATCAGAGTGAAGGTATTGTGGAATGAATTGTGGTGGACATT
JMSF031L05+           CAATAGCCTTTGGTTGGAGATCAGAGTGAAGGTATTGTGGAATGAATTGTGGTGGACATT
JMSF023K11+           CAATAGCCTTTGGTTGGAGATCAGAGTGAAGGTATTGTGGAATGAATTGTGGTGGACATT
JMSF021I01+           CAATAGCCTTTGGTTGGAGATCAGAGTGAAGGTATTGTGGAATGAATTGTGGTGGACATT
                      ____________________________________________________________
consensus             CAATAGCCTTTGGTTGGAGATCAGAGTGAAGGTATTGTGGAATGAATTGTGGTGGACATT
 
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JMSF029E13+           CTTTGAGCTCCAACATAATCTTTGTGAGTTTCAAGAAAGACTTGATTGATGATTCCACAT
JMSF031L05+           CTTTGAGCTCCAACATAATCTTTGTGAGTTTCAAGAAAGACTTGATTGATGATTCCACAT
JMSF023K11+           CTTTGAGCTCCAACATAATCTTTGTGAGTTTCAAGAAAGACTTGATTGATGATTCCACAT
JMSF021I01+           CTTTGAGCTCCAACATAATCTTTGTGAGTTTCAAGAAAGACTTGATTGATGATTCCACAT
                      ____________________________________________________________
consensus             CTTTGAGCTCCAACATAATCTTTGTGAGTTTCAAGAAAGACTTGATTGATGATTCCACAT
 
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JMSF029E13+           CACTCTCCGAGGTTGTTTTTGTGCCACTAATTTGCTTGAGAAGCCACACTCTTTTGGCTA
JMSF031L05+           CACTCTCCGAGGTTGTTTTTGTGCCACTAATTTGCTTGAGAAGCCACACTCTTTTGGCTA
JMSF023K11+           CACTCTCCGAGGTTGTTTTTGTGCCACTAATTTGCTTGAGAAGCCACACTCTTTTGGCTA
JMSF021I01+           CACTCTCCGAGGTTGTTTTTGTGCCACTAATTTGCTTGAGAAGCCACACTCTTTTGGCTA
                      ____________________________________________________________
consensus             CACTCTCCGAGGTTGTTTTTGTGCCACTAATTTGCTTGAGAAGCCACACTCTTTTGGCTA
 
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JMSF029E13+           ACCCATTCCTGTTTGACACTTTGCTTAGAATGCATTGGTCTCCATGGTTGTTGGCAAACG
JMSF031L05+           ACCCATTCCTGTTTGACACTTTGCTTAGAATGCATTGGTCTCCATGGTTGTTGGCAAACG
JMSF023K11+           ACCCATTCCTGTTTGACACTTTGCTTAGAATGCATTGGTCTCCATGGTTGTTGGCAAACG
JMSF021I01+           ACCCATTCCTGTTTGACACTTTGCTTAGAATGCATTGGTCTCCATGGTTGTTGGCAAACG
                      ____________________________________________________________
consensus             ACCCATTCCTGTTTGACACTTTGCTTAGAATGCATTGGTCTCCATGGTTGTTGGCAAACG
 
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JMSF029E13+           CTGCTAGGATCATCACTGCTTTGGCTTCCCATTCATAAGGTGACAACATGTTCAACAGAT
JMSF031L05+           CTGCTAGGATCATCACTGCTTTGGCTTCCCATTCATAAGGTGACAACATGTTCAACAGAT
JMSF023K11+           CTGNTAGGATCATCACTGCTTTGGCTTCCCATTCATAAGGTGACAACATGTTCAACAGAT
JMSF021I01+           CTGCTAGGATCATCACTGCTTTGGCTTCCCATTCATAAGGTGACAACATGTTCAACAGAT
                      ____________________________________________________________
consensus             CTGCTAGGATCATCACTGCTTTGGCTTCCCATTCATAAGGTGACAACATGTTCAACAGAT
 
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JMSF029E13+           TAATTGTCATCCCATGAACATCCCCATCTCTTGACCACTTGGATGTCATCTGGTAGGAAA
JMSF031L05+           TAATTGTCATCCCATGAACATCCCCATCTCTTGACCACTTGGATGTCATCTGGTAGGAAA
JMSF023K11+           TAATTGTCATCCCATGAACATCCCCATCTCTTGACCACTTGGATGTCATCTGGTAGGAAA
JMSF021I01+           TAATTGTCATCCCATGAACATCCCCATCTCTTGACCACTTGGATGTCATCTGGTAGGAAA
                      ____________________________________________________________
consensus             TAATTGTCATCCCATGAACATCCCCATCTCTTGACCACTTGGATGTCATCTGGTAGGAAA
 
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JMSF029E13+           GTTCTTTTATTTTGAACAGAATTTCCATTGTATCATGATCCGGTTGATGAAGTTGTTCTT
JMSF031L05+           GTTCTTTTATTTTGAACAGAATTTCCATTGTATCATGATCCGGTTGATGAAGTTGTTCTT
JMSF023K11+           GTTCTTTTATTTTGAACAGAATTTCCATTGTATCATGATCCGGTTGATGAAGTTGTTCTT
JMSF021I01+           GTTCTTTTATTTTGAACAGAATTTCCATTGTATCATGATCCGGTTGATGAAGTTGTTCTT
                      ____________________________________________________________
consensus             GTTCTTTTATTTTGAACAGAATTTCCATTGTATCATGATCCGGTTGATGAAGTTGTTCTT
 
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JMSF029E13+           CCATGGTTTTCCCTGTAGCCGTCTGGCTGCTGAGAATGTTGTGAACAACATCAAAAGTAC
JMSF031L05+           CCATGGTTTTCCCTGTAGCCGTCTGGCTGCTGAGAATGTTGTGAACAACATCAAAAGTAC
JMSF023K11+           CCATGGTTTTCCCTGTAGCCGTCTGGCTGCTGAGAATGTTGTGAACAACATCAAAAGTAC
JMSF021I01+           CCATGGTTTTCCCTGTAGCCGTCTGGCTGCTGAGAATGTTGTGAACAACATCAAAAGTAC
                      ____________________________________________________________
consensus             CCATGGTTTTCCCTGTAGCCGTCTGGCTGCTGAGAATGTTGTGAACAACATCAAAAGTAC
 
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JMSF029E13+           TTCCAACATTAATGTTGCGGCCATCTGGTTTATGAGTCTCACGAATTTGTTTTATAATTG
JMSF031L05+           TTCCAACATTAATGTTGCGGCCATCTGGTTTATGAGTCTCACGAATTTGTTTTATAATTG
JMSF023K11+           TTCCAACATTAATGTTGCGGCCATCTGGTTTATGAGTCTCACGAATTTGTTTTATAATTG
JMSF021I01+           TTCCAACATTAATGTTGCGGCCATCTGGTTTATGAGTCTCACGAATTTGTTTTATAATTG
                      ____________________________________________________________
consensus             TTCCAACATTAATGTTGCGGCCATCTGGTTTATGAGTCTCACGAATTTGTTTTATAATTG
 
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JMSF029E13+           TGGCCTCGTCGGGATGTGTTTGAGACATTGCGATGATATGCTAGACAAATCAACT     
JMSF031L05+           TGGCCTCGTCGGGATGTGTTTGAGACATTGCGATGATATGCTAGACAAATCAACT     
JMSF023K11+           TGGCCTCGTCGGGATGTGTTTGAGACATTGCGATGATATGCTAGACAAATCAACT     
JMSF021I01+           TGGCCTCGTCGGGATGTGTTTGAGACATTGCGATGATATGCTAGACAAATCAACTAGTCC
                      ____________________________________________________________
consensus             TGGCCTCGTCGGGATGTGTTTGAGACATTGCGATGATATGCTAGACAAATCAACTAGTCC