Contig 000728:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021F09Sequence666000728 (2)ref|XP_009628769.1|7e-81PREDICTED: DCN1-like protein 2 [Nicotiana tomentosiformis]786023517ref|XP_006431162.1|9e-59hypothetical protein CICLE_v10012215mg [Citrus clementina] gb|ESR44402.1| hypoth
JMSF025G01Sequence722000728 (2)ref|XP_009628769.1|5e-55PREDICTED: DCN1-like protein 2 [Nicotiana tomentosiformis]713020400ref|XP_002324063.2|2e-34hypothetical protein POPTR_0017s12060g, partial [Populus trichocarpa] gb|EEF0419

Alignment

This contig is upended


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JMSF025G01+                                                          AAGTCATCAATCA
                      ____________________________________________________________
consensus                                                            AAGTCATCAATCA
 
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JMSF025G01+           AGACTGGCCATGCTCCTTCAGGATCATATCCTTCAAGATTTTCATGTACACAACGACTGA
                      ____________________________________________________________
consensus             AGACTGGCCATGCTCCTTCAGGATCATATCCTTCAAGATTTTCATGTACACAACGACTGA
 
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JMSF025G01+           AAGCTAAAACTNGGCGCCATGTATCNTCAGATATGTTATATCGCTGATTTTTCTGTTAAT
                      ____________________________________________________________
consensus             AAGCTAAAACTNGGCGCCATGTATCNTCAGATATGTTATATCGCTGATTTTTCTGTTAAT
 
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JMSF025G01+           GAAGCCCAATGATGACGAATGTATTGGGGGCATAGAATGGTGTTCCACCCAAAGTTCATT
                      ____________________________________________________________
consensus             GAAGCCCAATGATGACGAATGTATTGGGGGCATAGAATGGTGTTCCACCCAAAGTTCATT
 
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JMSF025G01+           TGAAATAGCAAAGATATTACCTCAACAAAGTCACACCATTGGTCAAGTAATCGAAACCTT
JMSF021F09+                               CTCAACAAAGTCACACCATTGGTCAAGTAATCGAAACCTT
                      ____________________________________________________________
consensus             TGAAATAGCAAAGATATTACCTCAACAAAGTCACACCATTGGTCAAGTAATCGAAACCTT
 
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JMSF025G01+           CCAGCTAAAACTAACCTCCAGGCCATAACAGCCCTTCTCACAGTAATGTTCTTTTGACCA
JMSF021F09+           CCAGCTAAAACTAACCTCCAGGCCATAACAGCCCTTCTCACAGTAATGTTCTTTTGACCA
                      ____________________________________________________________
consensus             CCAGCTAAAACTAACCTCCAGGCCATAACAGCCCTTCTCACAGTAATGTTCTTTTGACCA
 
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JMSF025G01+           TTTTCTCGGCAGATGAAGAATACAAAATCATAGAAATGTGAAAATTCTGAGAAGTCAGCC
JMSF021F09+           TTTTCTCGGCAGATGAAGAATACAAAATCATAGAAATGTGAAAATTCTGAGAAGTCAGCC
                      ____________________________________________________________
consensus             TTTTCTCGGCAGATGAAGAATACAAAATCATAGAAATGTGAAAATTCTGAGAAGTCAGCC
 
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JMSF025G01+           TTCAAGTCTAATTGTGACATAAGCCTGCAAAGCCCTTCCATCAATGATATTTGCAATCTT
JMSF021F09+           TTCAAGTCTAATTGTGACATAAGCCTGCAAAGCCCTTCCATCAATGATATTTGCAATCTT
                      ____________________________________________________________
consensus             TTCAAGTCTAATTGTGACATAAGCCTGCAAAGCCCTTCCATCAATGATATTTGCAATCTT
 
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JMSF025G01+           GGCTCCACATATTTCAGGAGCTGGGGGAGTTCCTCTCTTAAGTATCTGGCTTTCTGAGGT
JMSF021F09+           GGCTCCACATATTTCAGGAGCTGGGGGAGTTCCTCTCTTAAGTATCTGGCTTTCTGAGGT
                      ____________________________________________________________
consensus             GGCTCCACATATTTCAGGAGCTGGGGGAGTTCCTCTCTTAAGTATCTGGCTTTCTGAGGT
 
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JMSF025G01+           TCATCATCTGGATTCCCGTTGGCCCGCACAATGTCAGAATATCGCCTGTAGATATCAAAG
JMSF021F09+           TCATCATCTGGATTCCCGTTGGCCCGCACAATGTCAGAATATCGCCTGTAGATATCAAAG
                      ____________________________________________________________
consensus             TCATCATCTGGATTCCCGTTGGCCCGCACAATGTCAGAATATCGCCTGTAGATATCAAAG
 
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JMSF025G01+           ATATCGAAGTGAAGTGAGCCAGGGGAATCCATGGGGCAGCCCCCTTCTGCAAAGCTAACG
JMSF021F09+           ATATCGAAGTGAAGTGAGCCAGGGGAATCCATGGGGCAGCCCCCTTCTGCAAAGCTAACG
                      ____________________________________________________________
consensus             ATATCGAAGTGAAGTGAGCCAGGGGAATCCATGGGGCAGCCCCCTTCTGCAAAGCTAACG
 
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JMSF025G01+           GAAATTGAATTTGTTCTTAGACGAAACCCTAAATCGAATAAGCCCTGGGAAACCCAGTCC
JMSF021F09+           GAAATTGAATTTGTTCTTAGACGAAACCCTAAATCGAATAAGCCCTGGGAAACCCAGTCC
                      ____________________________________________________________
consensus             GAAATTGAATTTGTTCTTAGACGAAACCCTAAATCGAATAAGCCCTGGGAAACCCAGTCC
 
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JMSF025G01+           CAAACCCCAAAGCGTACGCCTCAGTGTCAGATACGCAATCTAAGCTG             
JMSF021F09+           CAAACCCCAAAGCGTACGCCTCAGTGTCAGATACGCAATCTAAGCTGCAAGTATTTAGCC
                      ____________________________________________________________
consensus             CAAACCCCAAAGCGTACGCCTCAGTGTCAGATACGCAATCTAAGCTGCAAGTATTTAGCC