Contig 000726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013M11Sequence506000726 (7)emb|CDP02087.1|1e-46unnamed protein product [Coffea canephora]
JMFF014M21Sequence505000726 (7)emb|CDP02087.1|3e-46unnamed protein product [Coffea canephora]787002556 (5)ref|XP_009614932.1|1e-28PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial [Nicotian
JMFF037C09Sequence501000726 (7)emb|CDP02087.1|2e-45unnamed protein product [Coffea canephora]682002556 (5)ref|XP_009614932.1|1e-22PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial [Nicotian
JMSF006A07Sequence269000726 (7)emb|CDP02087.1|2e-13unnamed protein product [Coffea canephora]
JMSF021C08Sequence642000726 (7)ref|XP_006338583.1|2e-81PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial-like [Sol750002556 (5)ref|XP_009614932.1|1e-28PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial [Nicotian
JMSF027B24Sequence625000726 (7)emb|CDP02087.1|4e-90unnamed protein product [Coffea canephora]700002556 (5)ref|XP_009768206.1|2e-26PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial [Nicotian
JMSF037H07Sequence621000726 (7)emb|CDP02087.1|3e-89unnamed protein product [Coffea canephora]735002556 (5)ref|XP_009614932.1|4e-28PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial [Nicotian

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF027B24+ TTCCCATCAGATGAAAGAAC
JMSF037H07+ CATCAGATGAAAGAAC
                      ____________________________________________________________
consensus TTCCCATCAGATGAAAGAAC
 
. : . : . : . : . : . :
JMSF027B24+ ACTTGCCATAACCTGCACCTCATGGTAAAATCCAGCAGGAAAAAGGGGTCGTATTGGTCT
JMSF037H07+ ACTTGCCATAACCTGCACCTCATGGTAAAATCCAGCAGGAAAAAGGGGTCGTATTGGTCT
JMSF021C08+ CCTCATGGTAAAATCCAGCAGGAAAAAGGGGTCGTATTGGTCT
                      ____________________________________________________________
consensus ACTTGCCATAACCTGCACCTCATGGTAAAATCCAGCAGGAAAAAGGGGTCGTATTGGTCT
 
. : . : . : . : . : . :
JMSF027B24+ ATCAATGAGACGGCCACAGAGAAGTTCACGTTCCTTTGGAGCACCCTCCCTCCGCATGAA
JMSF037H07+ ATCAATGAGACGGCCACAGAGAAGTTCACGTTCCTTTGGAGCACCCTCCCTCCGCATGAA
JMFF014M21+ CGCATGAA
JMFF037C09+ TGAA
JMFF013M11+ CCGCATGAA
JMSF021C08+ ATCAATGAGACGGCCACAGAGAAGTTCACGTTCCTTTGGAGCACCCTCCCTCCGCATGAA
                      ____________________________________________________________
consensus ATCAATGAGACGGCCACAGAGAAGTTCACGTTCCTTTGGAGCACCCTCCCTCCGCATGAA
 
. : . : . : . : . : . :
JMSF027B24+ TGTACTTGGAATTAAACCTTGAGCAAATTGTTTCTCTTGGTAATCAACAGTGAGGGGTAG
JMSF037H07+ TGTACTTGGAATTAAACCTTGAGCAAATTGTTTCTCTTGGTAATCAACAGTGAGGGGTAG
JMFF014M21+ TGTACTTGGAATTAAACCTTGAGCAAATTGTTTCTCTTGGTAATCAACAGTGAGGGGTAG
JMFF037C09+ TGTACTTGGAATTAAACCTTGAGCAAATTGTTTCTCTTGGTAATCAACAGTGAGGGGTAG
JMFF013M11+ TGTACTTGGAATTAAACCTTGAGCAAATTGTTTCTCTTGGTAATCAACAGTGAGGGGTAG
JMSF021C08+ TGTACTTGGAATTAAACCTTGAGCAAATTGTTTCTCTTGGTAATCAACAGTGAGGGGTAG
                      ____________________________________________________________
consensus TGTACTTGGAATTAAACCTTGAGCAAATTGTTTCTCTTGGTAATCAACAGTGAGGGGTAG
 
. : . : . : . : . : . :
JMSF027B24+ AAAATCGCGAACTGCGTCG-CCCTTTGCAGAGGCCACGGTTGAGAGAACTTTAGTCTCGT
JMSF037H07+ AAAATCGCGAACTGCGTCG-CCCTTTGCAGAGGCCACGGTTGAGAGAACTTTAGTCTCGT
JMFF014M21+ AAAATCGCGAACTGCGTCGCCCCTTTGCAGAGGCCACGGTTGAGAGAACTTTAGTCTCGT
JMFF037C09+ AAAATCGCGAACTGCGTCGCCCCTTTGCAGAGGCCACGGTTGAGAGAACTTTAGTCTCGT
JMFF013M11+ AAAATCGCGAACTGCGTCGCCCCTTTGCAGAGGCCACGGTTGAGAGAACTTTAGTCTCGT
JMSF021C08+ AAAATCGCGAACTGCGTCG-CCCTTTGCAGAGGCCACGGTTGAGAGAACTTTAGTCTCGT
                      ____________________________________________________________
consensus AAAATCGCGAACTGCGTCGCCCCTTTGCAGAGGCCACGGTTGAGAGAACTTTAGTCTCGT
 
. : . : . : . : . : . :
JMSF027B24+ CCATAGCTAGGACCACTGAGCCATTGGCAAACCGAGCAATCTTCCCAGTTTCCAGAGTAA
JMSF037H07+ CCATAGCTAGGACCACTGAGCCATTGGCAAACCGAGCAATCTTCCCAGTTTCCAGAGTAA
JMFF014M21+ CCATAGCTAGGACCACTGAGCCATTGGCAAACCGAGCAATCTTCCCAGTTTCCAGAGTAA
JMFF037C09+ CCATAGCTAGGACCACTGAGCCATTGGCAAACCGAGCAATCTTCCCAGTTTCCAGAGTAA
JMFF013M11+ CCATAGCTAGGACCACTGAGCCATTGGCAAACCGAGCAATCTTCCCAGTTTCCAGAGTAA
JMSF021C08+ CCATAGCTAGGACCACTGAGCCATTGGCAAACCGAGCAATCTTCCCAGTTTCCAGAGTAA
                      ____________________________________________________________
consensus CCATAGCTAGGACCACTGAGCCATTGGCAAACCGAGCAATCTTCCCAGTTTCCAGAGTAA
 
. : . : . : . : . : . :
JMSF027B24+ TTTTCCGCGAACCAATTTCGAATTCCTCAGTAAATGATTCTAGAATCTTTGTACCAGCCA
JMSF037H07+ TTTTCCGCGAACCAATTTCGAATTCCTCAGTAAATGATTCTAGAATCTTTGTACCAGCCA
JMFF014M21+ TTTTCCGCGAACCAATTTCGAATTCCTCAGTAAATGATTCTAGAATCTTTGTACCAGCCA
JMFF037C09+ TTTTCCGCGAACCAATTTCGAATTCCTCAGTAAATGATTCTAGAATCTTTGTACCAGCCA
JMFF013M11+ TTTTCCGCGAACCAATTTCGAATTCCTCAGTAAATGATTCTAGAATCTTTGTACCAGCCA
JMSF021C08+ TTTTCCGCGAACCAATTTCGAATTCCTCAGTAAATGATTCTAGAATCTTTGTACCAGCCA
                      ____________________________________________________________
consensus TTTTCCGCGAACCAATTTCGAATTCCTCAGTAAATGATTCTAGAATCTTTGTACCAGCCA
 
. : . : . : . : . : . :
JMSF027B24+ TGTGTGTTTCTGAATCGGAAGATGGTGAAGACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
JMSF037H07+ TGTGTGTTTCTGAATCGGAAGATGGTGAAGACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
JMFF014M21+ TGTGTGTTTCTGAATCGGAAGATGGTGAAGACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
JMFF037C09+ TGTGTGTTTCTGAATCGGAAGATGGTGAAGACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
JMFF013M11+ TGTGTGTTTCTGAATCGGAAGATGGTGAAGACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
JMSF006A07+ GACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
JMSF021C08+ TGTGTGTTTCTGAATCGGAAGATGGTGAAGACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
                      ____________________________________________________________
consensus TGTGTGTTTCTGAATCGGAAGATGGTGAAGACAGAGTGGAAGTAGCGAAGCCAAGGCGGC
 
. : . : . : . : . : . :
JMSF027B24+ CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
JMSF037H07+ CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
JMFF014M21+ CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
JMFF037C09+ CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
JMFF013M11+ CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
JMSF006A07+ CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
JMSF021C08+ CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
                      ____________________________________________________________
consensus CGCTGCATATGGTGCGGAAGCCAAATCTTTGCCATGTGAGGACGTGAGGTAGGGTTGAGA
 
. : . : . : . : . : . :
JMSF027B24+ TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
JMSF037H07+ TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
JMFF014M21+ TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
JMFF037C09+ TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
JMFF013M11+ TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
JMSF006A07+ TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
JMSF021C08+ TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
                      ____________________________________________________________
consensus TAAGTGGGTTAGCTTTACTCGTCACTGAGGCCATTATGGGTTTAAGGAAACTGGAATTTA
 
. : . : . : . : . : . :
JMSF027B24+ GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
JMSF037H07+ GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
JMFF014M21+ GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
JMFF037C09+ GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
JMFF013M11+ GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
JMSF006A07+ GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
JMSF021C08+ GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
                      ____________________________________________________________
consensus GGGGAGAAGGAGACAGAGTTGAAGAGCTAGGGTTTAAGCAGGGTTTTTCCTGGGAATGAA
 
. : . : . : . : . : . :
JMSF027B24+ AACG
JMSF037H07+ AACG
JMFF014M21+ AACGTGGATCTGCCCCC
JMFF037C09+ AACGTGGATCTGCCCCC
JMFF013M11+ AACGTGGATCTGCCCCC
JMSF006A07+ AACGTGGATCTGCCCCCTGCTCGGGCTAGGCGCTTCAACGGTGAATTACAGTATCGC
JMSF021C08+ AACGTGGATCTGCCCCCTGCTCGGGCTAGGCGCTTCAACGGTGAATTACAGTATCGCACC
                      ____________________________________________________________
consensus AACGTGGATCTGCCCCCTGCTCGGGCTAGGCGCTTCAACGGTGAATTACAGTATCGCACC