Contig 000723:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010I23Sequence554000723 (4)ref|XP_006344538.1|7e-43PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [So771008171 (4)ref|XP_009621427.1|1e-104PREDICTED: homogentisate phytyltransferase 1, chloroplastic isoform X2 [Nicotia
JMSF015K23Sequence338000723 (4)ref|XP_006344538.1|1e-12PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [So761008171 (4)ref|XP_009621427.1|1e-112PREDICTED: homogentisate phytyltransferase 1, chloroplastic isoform X2 [Nicotia
JMSF021A12Sequence661000723 (4)ref|XP_010323392.1|5e-65PREDICTED: homogentisate phytyltransferase 1, chloroplastic isoform X2 [Solanum808008171 (4)ref|XP_009799515.1|2e-118PREDICTED: homogentisate phytyltransferase 1, chloroplastic isoform X2 [Nicotia
JMSF021M02Sequence695000723 (4)ref|XP_010323392.1|1e-71PREDICTED: homogentisate phytyltransferase 1, chloroplastic isoform X2 [Solanum722008171 (4)ref|XP_009621427.1|2e-104PREDICTED: homogentisate phytyltransferase 1, chloroplastic isoform X2 [Nicotia

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021M02+ AACGGCCAAGAACCAACAGCACTTGCAAGCCAAAA
JMSF021A12+ A
                      ____________________________________________________________
consensus AACGGCCAAGAACCAACAGCACTTGCAAGCCAAAA
 
. : . : . : . : . : . :
JMSF021M02+ ACTCATAACAGCAAAAGATGAAACGATCATTATGCCAGTTTTCACCGAATATTCGCCTGA
JMSF021A12+ ACTCATAACAGCAAAAGATGAAACGATCATTATGCCAGTTTTCACCGAATATTCGCCTGA
                      ____________________________________________________________
consensus ACTCATAACAGCAAAAGATGAAACGATCATTATGCCAGTTTTCACCGAATATTCGCCTGA
 
. : . : . : . : . : . :
JMSF021M02+ TGCTAATGGAAGATATGGTTTGTTCACCTTGTCTATTTCAATATCAGACAACTGATTCAA
JMFF010I23+ CAATATCAGACAACTGATTCAA
JMSF021A12+ TGCTAATGGAAGATATGGTTTGTTCACCTTGTCTATTTCAATATCAGACAACTGATTCAA
                      ____________________________________________________________
consensus TGCTAATGGAAGATATGGTTTGTTCACCTTGTCTATTTCAATATCAGACAACTGATTCAA
 
. : . : . : . : . : . :
JMSF021M02+ ACCAACTATGTATATATTCATAAAGAGGGCAGCAACAATGGCCTCAAGCGTCCCAGTGAA
JMFF010I23+ ACCAACTATGTATATATTCATAAAGAGGGCAGCAACAATGGCCTCAAGCGTCCCAGTGAA
JMSF021A12+ ACCAACTATGTATATATTCATAAAGAGGGCAGCAACAATGGCCTCAAGCGTCCCAGTGAA
                      ____________________________________________________________
consensus ACCAACTATGTATATATTCATAAAGAGGGCAGCAACAATGGCCTCAAGCGTCCCAGTGAA
 
. : . : . : . : . : . :
JMSF021M02+ AAATAATGGAGAAATATCTGAGAGCTTCTCAACTGCAAGAAGAGAAACTGAAAGTATGCT
JMFF010I23+ AAATAATGGAGAAATATCTGAGAGCTTCTCAACTGCAAGAAGAGAAACTGAAAGTATGCT
JMSF021A12+ AAATAATGGAGAAATATCTGAGAGCTTCTCAACTGCAAGAAGAGAAACTGAAAGTATGCT
                      ____________________________________________________________
consensus AAATAATGGAGAAATATCTGAGAGCTTCTCAACTGCAAGAAGAGAAACTGAAAGTATGCT
 
. : . : . : . : . : . :
JMSF021M02+ CAGTGCTGTTCCTATAACCGTATGAGGCCGCGAAAATCTGTAGAAAGCATCCAAAACCCC
JMSF015K23+ TGTAGAAAGCATCCAAAACCCC
JMFF010I23+ CAGTGCTGTTCCTATAACCGTATGAGGCCGCGAAAATCTGTAGAAAGCATCCAAAACCCC
JMSF021A12+ CAGTGCTGTTCCTATAACCGTATGAGGCCGCGAAAATCTGTAGAAAGCATCCAAAACCCC
                      ____________________________________________________________
consensus CAGTGCTGTTCCTATAACCGTATGAGGCCGCGAAAATCTGTAGAAAGCATCCAAAACCCC
 
. : . : . : . : . : . :
JMSF021M02+ CTGAACTGACTTCGAAGGGCTGTTGGATGGCTCAGATTCAAGAGGATGATCTGAAGCTGC
JMSF015K23+ CTGAACTGACTTCGAAGGGCTGTTGGATGGCTCAGATTCAAGAGGATGATCTGAAGCTGC
JMFF010I23+ CTGAACTGACTTCGAAGGGCTGTTGGATGGCTCAGATTCAAGAGGATGATCTGAAGCTGC
JMSF021A12+ CTGAACTGACTTCGAAGGGCTGTTGGATGGCTCAGATTCAAGAGGATGATCTGAAGCTGC
                      ____________________________________________________________
consensus CTGAACTGACTTCGAAGGGCTGTTGGATGGCTCAGATTCAAGAGGATGATCTGAAGCTGC
 
. : . : . : . : . : . :
JMSF021M02+ TGCATTCACCGAAAACCCTTCTCTATGTCTTAAGTTAATAATACTTCCATCACTGCTTCC
JMSF015K23+ TGCATTCACCGAAAACCCTTCTCTATGTCTTAAGTTAATAATACTTCCATCACTGCTTCC
JMFF010I23+ TGCATTCACCGAAAACCCTTCTCTATGTCTTAAGTTAATAATACTTCCATCACTGCTTCC
JMSF021A12+ TGCATTCACCGAAAACCCTTCTCTATGTCTTAAGTTAATAATACTTCCATCACTGCTTCC
                      ____________________________________________________________
consensus TGCATTCACCGAAAACCCTTCTCTATGTCTTAAGTTAATAATACTTCCATCACTGCTTCC
 
. : . : . : . : . : . :
JMSF021M02+ AACATGCTCCAGTGTCGCTAATGGTCTCTGCAATCGCATGGGCAACGGCCAGGGCTTTTC
JMSF015K23+ AACATGCTCTAGTGTCGCTAATGGTCTCTGCAATCGCATGGGCAACGGCCAGGGCTTTTC
JMFF010I23+ AACATGCTCTAGTGTCGCTAATGGTCTCTGCAATCGCATGGGCAACGGCCAGGGCTTTTC
JMSF021A12+ AACATGCTCCAGTGTCGCTAATGGTCTCTGCAATCGCATGGGCAACGGCCAGGGCTTTTC
                      ____________________________________________________________
consensus AACATGCTCTAGTGTCGCTAATGGTCTCTGCAATCGCATGGGCAACGGCCAGGGCTTTTC
 
. : . : . : . : . : . :
JMSF021M02+ TCCGCCATTCAATGCTTTGCACTTTGAAACTTGTGTTGTTTGATGTGAATATGAAGACGA
JMSF015K23+ TCCGCCATTCAATGCTTTGCACTTTGAAACTTGTGTTGTTTGATGTGAATATGAAGACGA
JMFF010I23+ TCCGCCATTCAATGCTTTGCACTTTGAAACTTGTGTTGTTTGATGTGAATATGAAGACGA
JMSF021A12+ TCCGCCATTCAATGCTTTGCACTTTGAAACTTGTGTTGTTTGATGTGAATATGAAGACGA
                      ____________________________________________________________
consensus TCCGCCATTCAATGCTTTGCACTTTGAAACTTGTGTTGTTTGATGTGAATATGAAGACGA
 
. : . : . : . : . : . :
JMSF021M02+ CAAGTGAGATTTAAGCGGAAACGAAAGAGAAGATGAAGTTTTCACAATTAGCAGAGACTC
JMSF015K23+ CAAGTGAGATTTAAGCGGAAACGAAAGAGAAGATGAAGTTTTCACAATTAGCAGAGACTC
JMFF010I23+ CAAGTGAGATTTAAGCGGAAACGAAAGAGAAGATGAAGTTTTCACAATTAGCAGAGACTC
JMSF021A12+ CAAGTGAGATTTAAGCGGAAACGAAAGAGAAGATGAAGTTTTCACAATTAGCAGAGACTC
                      ____________________________________________________________
consensus CAAGTGAGATTTAAGCGGAAACGAAAGAGAAGATGAAGTTTTCACAATTAGCAGAGACTC
 
. : . : . : . : . : . :
JMSF021M02+ CATTTTTGCCTTCTCTCTCTCACTACTTCACTTCACACACGTAATAAGTAACGGAGAACC
JMSF015K23+ CATTTTTGCCTTC
JMFF010I23+ CATTTTTGCCTTCTCTCTCTCACTACTTCACTTCACACACGTAATAAGTAAC
JMSF021A12+ CATTTTTGCCTTCTCTCTCTCACTACTTCACTTCACACACGTAATAAGTAACGGAGAACC
                      ____________________________________________________________
consensus CATTTTTGCCTTCTCTCTCTCACTACTTCACTTCACACACGTAATAAGTAACGGAGAACC