| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031C13 | Sequence | 559 | 000721 (4) | emb|CDP14264.1| | 1e-32 | unnamed protein product [Coffea canephora] | 668 | 007521 (15) | ref|XP_011093914.1| | 2e-51 | PREDICTED: organic cation/carnitine transporter 7-like isoform X2 [Sesamum indi |
| JMFS082G02 | Sequence | 614 | 000721 (4) | emb|CDP14264.1| | 3e-32 | unnamed protein product [Coffea canephora] | |||||
| JMSF007E04 | Sequence | 390 | 000721 (4) | emb|CDP14264.1| | 4e-28 | unnamed protein product [Coffea canephora] | 774 | 001187 (7) | ref|XP_011093914.1| | 4e-78 | PREDICTED: organic cation/carnitine transporter 7-like isoform X2 [Sesamum indi |
| JMSF020O23 | Sequence | 687 | 000721 (4) | emb|CDP14264.1| | 5e-32 | unnamed protein product [Coffea canephora] | 692 | 007521 (15) | ref|XP_011093914.1| | 2e-51 | PREDICTED: organic cation/carnitine transporter 7-like isoform X2 [Sesamum indi |
This contig is upended
. : . : . : . : . : . :
JMSF020O23+ GTCACACATTTAGATATAGACTTATTG
____________________________________________________________
consensus GTCACACATTTAGATATAGACTTATTG
. : . : . : . : . : . :
JMSF020O23+ TATTAGGGCAAACCAGTTTATCTATTTAACACTACCAACTCACTAATGGTTTCTCTCAGA
____________________________________________________________
consensus TATTAGGGCAAACCAGTTTATCTATTTAACACTACCAACTCACTAATGGTTTCTCTCAGA
. : . : . : . : . : . :
JMFF031C13+ ACAGGATGCAAATGATGATT
JMFS082G02+ GATGCAAATGATGATT
JMSF020O23+ TCCAAAACCATTGTTGCAGATCAGATATACATACATACATACAGGATGCAAATGATGATT
____________________________________________________________
consensus TCCAAAACCATTGTTGCAGATCAGATATACATACATACATACAGGATGCAAATGATGATT
. : . : . : . : . : . :
JMFF031C13+ AGAGCATCTATATTTTAGTGTGACTGTATAAGCATCTTACTGGTTCATAGATCAAACAAG
JMFS082G02+ AGAGCATCTATATTTTAGTGTGACTGTATAAGCATCTANCTGGTTCATAGATCAAACAAG
JMSF020O23+ AGAGCATCTATATTTTAGTGTGACTGTATAAGCATCTTACTGGTTCATAGATCAAACAAG
____________________________________________________________
consensus AGAGCATCTATATTTTAGTGTGACTGTATAAGCATCTTACTGGTTCATAGATCAAACAAG
. : . : . : . : . : . :
JMFF031C13+ CAATTAGCTAGCTACTCAAGTAAAGCAAAAACGCATAAAGATAAAGACGAGTATATGAAA
JMFS082G02+ CAATTAGCTAGCTACTCAAGTAAAGCAAAAACGCATAAAGATAAAGACGAGTATATGAAA
JMSF020O23+ CAATTAGCTAGCTACTCAAGTAAAGCAAAAACGCATAAAGATAAAGACGAGTATATGAAA
____________________________________________________________
consensus CAATTAGCTAGCTACTCAAGTAAAGCAAAAACGCATAAAGATAAAGACGAGTATATGAAA
. : . : . : . : . : . :
JMFF031C13+ AGCGGAAAGCTAGCCTTCTTCCGAAATTATCGGAGAGGAGGCCCCAGGAATAAGCTCCGA
JMFS082G02+ AGCGGAAAGCTAGCCTTCTTCCGAAATTATCGGAGAGGAGGCCCCAGGAATAAGCTCCGA
JMSF007E04+ CGGAGAGGAGGCCCCAGGAATAAGCTCCGA
JMSF020O23+ AGCGGAAAGCTAGCCTTCTTCCGAAATTATCGGAGAGGAGGCCCCAGGAATAAGCTCCGA
____________________________________________________________
consensus AGCGGAAAGCTAGCCTTCTTCCGAAATTATCGGAGAGGAGGCCCCAGGAATAAGCTCCGA
. : . : . : . : . : . :
JMFF031C13+ TGAGCATGCCGGCGAAGACGACGGTGGTGATTAAGCCTTCCTCGGCGGCGGAAAGTCCCC
JMFS082G02+ TGAGCATGCCGGCGAAGACGACGGTGGTGATTAAGCCTTCCTCGGCGGCGGAAAGTCCCC
JMSF007E04+ TGAGCATGCCGGCGAAGACGACGGTGGTGATTAAGCCTTCCTCGGCGGCGGAAAGTCCCC
JMSF020O23+ TGAGCATGCCGGCGAAGACGACGGTGGTGATTAAGCCTTCCTCGGCGGCGGAAAGTCCCC
____________________________________________________________
consensus TGAGCATGCCGGCGAAGACGACGGTGGTGATTAAGCCTTCCTCGGCGGCGGAAAGTCCCC
. : . : . : . : . : . :
JMFF031C13+ AGAGGACCTTAACAGAGGGGCCAATAAACGACAGAAGCATCACTTCCATGGCGTCCACAA
JMFS082G02+ AGAGGACCTTAACAGAGGGGCCAATAAACGACAGAAGCATCACTTCCATGGCGTCCACAA
JMSF007E04+ AGAGGACCTTAACAGAGGGGCCAATAAACGACAGAAGCATCACTTCCATGGCGTCCACAA
JMSF020O23+ AGAGGACCTTAACAGAGGGGCCAATAAACGACAGAAGCATCACTTCCATGGCGTCCACAA
____________________________________________________________
consensus AGAGGACCTTAACAGAGGGGCCAATAAACGACAGAAGCATCACTTCCATGGCGTCCACAA
. : . : . : . : . : . :
JMFF031C13+ GGTAGCCCAGCCCTGCATATGCAAGCACCCAATACTGGAACCTCCCAAACTCCGCCGCGG
JMFS082G02+ GGTAGCCCAGCCCTGCATATGCAAGCACCCAATACTGGAACCTCCCAAACTCCGCCGCGG
JMSF007E04+ GGTAGCCCAGCCCTGCATATGCAAGCACCCAATACTGGAACCTCCCAAACTCCGCCGCGG
JMSF020O23+ GGTAGCCCAGCCCTGCATATGCAAGCACCCAATACTGGAACCTCCCAAACTCCGCCGCGG
____________________________________________________________
consensus GGTAGCCCAGCCCTGCATATGCAAGCACCCAATACTGGAACCTCCCAAACTCCGCCGCGG
. : . : . : . : . : . :
JMFF031C13+ AAAGCGCCTCGTCGATCGAGTAGTAAACGCCGGCATCGTCTCCTCCCAGTCCGTAATTCT
JMFS082G02+ AAAGCGCCTCGTCGATCGAGTAGTAAACGCCGGCATCGTCTCCTCCCAGTCCGTAATTCT
JMSF007E04+ AAAGCGCCTCGTCGATCGAGTAGTAAACGCCGGCATCGTCTCCTCCCAGTCCGTAATTCT
JMSF020O23+ AAAGCGCCTCGTCGATCGAGTAGTAAACGCCGGCATCGTCTCCTCCCAGTCCGTAATTCT
____________________________________________________________
consensus AAAGCGCCTCGTCGATCGAGTAGTAAACGCCGGCATCGTCTCCTCCCAGTCCGTAATTCT
. : . : . : . : . : . :
JMFF031C13+ GCGGCGGCACCACATCCTCCACATCAATCATGCTGAAAACGTTTGGTATGATAGTTGTAG
JMFS082G02+ GCGGCGGCACCACATCCTCC
JMSF007E04+ GCGGCGGCACCACATCCTCCACATCAATCATGCTGAAAACGTTTGGTATGATAGTTGTAG
JMSF020O23+ GCGGCGGCACCACATCCTCCACATCAATCATGCTGAAAACGTTTGGTATGATAGTTGTAG
____________________________________________________________
consensus GCGGCGGCACCACATCCTCCACATCAATCATGCTGAAAACGTTTGGTATGATAGTTGTAG
. : . : . : . : . : . :
JMFF031C13+ CATCTGACAAGAGAAGCGCGAGAATAGGAAGCAGTCAGTGTCTCAGTGATAGATAGTCC
JMSF007E04+ CATCTGACAAGAGAAGCGCGAGAATAGGAAGCAGTCAGTGTCTCAGTGATAGATAGTCCC
JMSF020O23+ CATCTGACAAGAGAAGCGCGAGAATAGGAAGCAGTCAGTGTCTCAGTGATAGATAGTCCC
____________________________________________________________
consensus CATCTGACAAGAGAAGCGCGAGAATAGGAAGCAGTCAGTGTCTCAGTGATAGATAGTCCC