Contig 000720:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028H16Sequence156000720 (3)
JMSF020J05Sequence265000720 (3)767008349 (3)emb|CDP12211.1|3e-26unnamed protein product [Coffea canephora]
JMSF025G09Sequence120000720 (3)761008349 (3)emb|CDP12211.1|1e-30unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF020J05+                                             ATTCCCTNGCCGNAAACCCAACCNCN
                      ____________________________________________________________
consensus                                               ATTCCCTNGCCGNAAACCCAACCNCN
 
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JMSF025G09+                                               GNGGNAGAAGGCGNCTTTTTTTTN
JMSF020J05+           ATTGNTNGAAGAAAANGTCGNGAATNGGNGGGGNCCGNGGNAGNAGGCGNCTTTTTTTTC
                      ____________________________________________________________
consensus             ATTGNTNGAAGAAAANGTCGNGAATNGGNGGGGNCCGNGGNAGAAGGCGNCTTTTTTTTC
 
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JMFF028H16+                AAAAAAAAAAGGAATATTAATAGAGAAAAAATAAAAAAGCTCGGAATTGGAGTTT
JMSF025G09+           CCCNAAAAAAAAAAAGGAATATTAATAGAGAAAAAATAAAAAAGCTCGGAATTGGAGTTT
JMSF020J05+           CCC-NAAAAAAAAAAGGAATATTAATAGAGAAAAAATAAAAAAGCTCGGAATTGGAGTTT
                      ____________________________________________________________
consensus             CCCNAAAAAAAAAAAGGAATATTAATAGAGAAAAAATAAAAAAGCTCGGAATTGGAGTTT
 
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JMFF028H16+           GATTCCAAGTTGTATTCAGATTTCACTGTCAGGTTAGAAAATACGAAATGGAGGCCAGAT
JMSF025G09+           GATTCCAAGTTGTATTCAGATTTCACTGTCAGG                           
JMSF020J05+           GATTCCAAGTTGTATTCAGATTTCACTGTCAGGTTAGAAAATACGAAATGGAGGCCAGAT
                      ____________________________________________________________
consensus             GATTCCAAGTTGTATTCAGATTTCACTGTCAGGTTAGAAAATACGAAATGGAGGCCAGAT
 
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JMFF028H16+           TTGAGATTTGAGAATTCTCTTCAC                                    
JMSF020J05+           TTGAGATTTGAGAATTCTCTTCACACTAAAATTAGAAAATGATTAAACAACCATTTAATC
                      ____________________________________________________________
consensus             TTGAGATTTGAGAATTCTCTTCACACTAAAATTAGAAAATGATTAAACAACCATTTAATC