Contig 000716:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019C20Sequence459000716 (2)gb|KCW73752.1|4e-11hypothetical protein EUGRSUZ_E023601, partial [Eucalyptus grandis] gb|KCW73753.1856004330 (2)ref|XP_006355597.1|2e-93PREDICTED: C-terminal processing peptidase, chloroplastic-like [Solanum tuberos
JMSF037M24Sequence638000716 (2)ref|XP_002271932.1|3e-37PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic [Vitis vinif593004330 (2)ref|XP_010316906.1|2e-40PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2 [

Alignment

This contig is upended


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JMSF037M24+                                           ATTGTCACCTGGAACCTCCCGAAGATTT
                      ____________________________________________________________
consensus                                             ATTGTCACCTGGAACCTCCCGAAGATTT
 
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JMSF037M24+           ATTCCAATCCCAGTCATATCATACCTCGCCATCTTGGAGAACTTTCAGAGGTGATGGTAG
                      ____________________________________________________________
consensus             ATTCCAATCCCAGTCATATCATACCTCGCCATCTTGGAGAACTTTCAGAGGTGATGGTAG
 
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JMSF037M24+           TAATATATGCCATGGAATAAAAACACTCTGCAGGAGAAAGAAACCGTGTATAAGGATCAC
                      ____________________________________________________________
consensus             TAATATATGCCATGGAATAAAAACACTCTGCAGGAGAAAGAAACCGTGTATAAGGATCAC
 
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JMSF037M24+           CCAAGCTGGCCAACATCCTCCTAATGATATCATGAGCTCTTGGTCTTGACTGAATTGATG
                      ____________________________________________________________
consensus             CCAAGCTGGCCAACATCCTCCTAATGATATCATGAGCTCTTGGTCTTGACTGAATTGATG
 
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JMSF037M24+           TACTCAAGATGTCCTCTTTCTTACTACGCCAAATTTCAGGAGACCACGAGCGACGGCTAG
JMSF019C20+                                TACTACGCCAAATTTCAGGAGACCACGAGCGACGGCTAG
                      ____________________________________________________________
consensus             TACTCAAGATGTCCTCTTTCTTACTACGCCAAATTTCAGGAGACCACGAGCGACGGCTAG
 
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JMSF037M24+           TATTGAGAAAGCTATCATTGACAATCTGCCACACCTCCGCCACAATCCCCTCATTACTCA
JMSF019C20+           TATTGAGAAAGCTATCATTGACAATCTGCCACACCTCCGCCACAATCCCCTCATTACTCA
                      ____________________________________________________________
consensus             TATTGAGAAAGCTATCATTGACAATCTGCCACACCTCCGCCACAATCCCCTCATTACTCA
 
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JMSF037M24+           CCACTTCAGGCTCCGCCGGCGCCGCACTCAGCTCCTGCTCGTCTTCGCGGCAATCAAGCT
JMSF019C20+           CCACTTCAGGCTCCGCCGGCGCCGCACTCAGCTCCTGCTCGTCTTCGCGGCAATCAAGCT
                      ____________________________________________________________
consensus             CCACTTCAGGCTCCGCCGGCGCCGCACTCAGCTCCTGCTCGTCTTCGCGGCAATCAAGCT
 
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JMSF037M24+           GCTGCTCCTCATTCGTCTGCACCAGAGCAACGGCGGACAATCGGTCTGAGGAGAACTCGG
JMSF019C20+           GCTGCTCCTCATTCGTCTGCACCAGAGCAACGGCGGACAATCGGTCTGAGGAGAACTCGG
                      ____________________________________________________________
consensus             GCTGCTCCTCATTCGTCTGCACCAGAGCAACGGCGGACAATCGGTCTGAGGAGAACTCGG
 
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JMSF037M24+           AAGCGATTGATGGCGGAGAAATGAGAAGGCCCAAGGAGAGTGCGACGGAGACGCCGGTTG
JMSF019C20+           AAGCGATTGATGGCGGAGAAATGAGAAGGCCCAAGGAGAGTGCGACGGAGACGCCGGTTG
                      ____________________________________________________________
consensus             AAGCGATTGATGGCGGAGAAATGAGAAGGCCCAAGGAGAGTGCGACGGAGACGCCGGTTG
 
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JMSF037M24+           TGATGAAAGCTTTCTGAGGAATTGAAGCTTTGTGAAGAGAAGCAGTAGTTAGCCGGGACG
JMSF019C20+           TGATGAAAGCTTTCTGAGGAATTGAAGCTTTGTGAAGAGAAGCAGTAGTTAGCCGGGACG
                      ____________________________________________________________
consensus             TGATGAAAGCTTTCTGAGGAATTGAAGCTTTGTGAAGAGAAGCAGTAGTTAGCCGGGACG
 
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JMSF037M24+           GTGGCGGAGGCGGACGCGATGGCGATGGCGGTGGCGGAGGAGAATTTAGTGGCGGGAAGC
JMSF019C20+           GTGGCGGAGGCGGACGCGATGGCGATGGCGGTGGCGGAGGAGAATTTAGTGGCGGGAAGC
                      ____________________________________________________________
consensus             GTGGCGGAGGCGGACGCGATGGCGATGGCGGTGGCGGAGGAGAATTTAGTGGCGGGAAGC
 
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JMSF037M24+           GGTTGTTGC                                                   
JMSF019C20+           GGTTGTTGCAGAGCGGTAATCTCATCTCCACCGCGTGTTACACTCACTGTGTTACTCTTC
                      ____________________________________________________________
consensus             GGTTGTTGCAGAGCGGTAATCTCATCTCCACCGCGTGTTACACTCACTGTGTTACTCTTC