Contig 000710:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014N03Sequence554000710 (4)ref|XP_009773433.1|7e-08PREDICTED: BEL1-like homeodomain protein 4 [Nicotiana sylvestris]727011017 (5)ref|XP_009773433.1|7e-41PREDICTED: BEL1-like homeodomain protein 4 [Nicotiana sylvestris]
JMFF024E13Sequence433000710 (4)ref|XP_009773433.1|2e-06PREDICTED: BEL1-like homeodomain protein 4 [Nicotiana sylvestris]688011017 (5)ref|XP_009773433.1|2e-34PREDICTED: BEL1-like homeodomain protein 4 [Nicotiana sylvestris]
JMSF006C02Sequence177000710 (4)359011017 (5)
JMSF018M06Sequence197000710 (4)756011017 (5)ref|XP_009773433.1|7e-52PREDICTED: BEL1-like homeodomain protein 4 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF014N03+ TTCAACGACAACGAA
                      ____________________________________________________________
consensus TTCAACGACAACGAA
 
. : . : . : . : . : . :
JMFF014N03+ AGCCCTTGATGAGCTTCTTCCATGGTTATCAGCGGACTAACAACTTGGAATCCTTGATGG
                      ____________________________________________________________
consensus AGCCCTTGATGAGCTTCTTCCATGGTTATCAGCGGACTAACAACTTGGAATCCTTGATGG
 
. : . : . : . : . : . :
JMFF024E13+ GTGCAGTACGAGGT
JMFF014N03+ ATAAGGTTGGATTCCGGTGATAGATCGGTGCCGGCTAACGTAAACGGTGCAGTACGAGGT
                      ____________________________________________________________
consensus ATAAGGTTGGATTCCGGTGATAGATCGGTGCCGGCTAACGTAAACGGTGCAGTACGAGGT
 
. : . : . : . : . : . :
JMFF024E13+ GGTGGGGAGGAGCTGGGTTTGACATGGATAAGATTCATCAATGGAAGTGCTTGGTTTAAT
JMFF014N03+ GGTGGGGAGGAGCTGGGTTTGACATGGATAAGATTCATCAATGGAAGTGCTTGGTTTAAT
                      ____________________________________________________________
consensus GGTGGGGAGGAGCTGGGTTTGACATGGATAAGATTCATCAATGGAAGTGCTTGGTTTAAT
 
. : . : . : . : . : . :
JMFF024E13+ GAGAGTGGATTATCTTTCTGAGGCCATGATCTGCCGCCATAGCTGGAAGCTTGGATCTGC
JMFF014N03+ GAGAGTGGATTATCTTTCTGAGGCCATGATCTGCCGCCATAGCTGGAAGCTTGGATCTGC
                      ____________________________________________________________
consensus GAGAGTGGATTATCTTTCTGAGGCCATGATCTGCCGCCATAGCTGGAAGCTTGGATCTGC
 
. : . : . : . : . : . :
JMFF024E13+ TCTTCCAGAACTTGTGCGGCGGATTTCCGCCACGCAGACCGGTAGTTGTCCACCATCTCC
JMFF014N03+ TCTTCCAGAACTTGTGCGGCGGATTTCCGCCACGCAGACCGGTAGTTGTCCACCATCTCC
                      ____________________________________________________________
consensus TCTTCCAGAACTTGTGCGGCGGATTTCCGCCACGCAGACCGGTAGTTGTCCACCATCTCC
 
. : . : . : . : . : . :
JMFF024E13+ GCCAGCATTCCGCCGTTGGAGTCATCACATCCCGGTGGCGCGTCTCCTTCAAACCCTCCA
JMFF014N03+ GCCAGCATTCCGCCGTTGGAGTCATCACATCCCGGTGGCGCGTCTCCTTCAAACCCTCCA
                      ____________________________________________________________
consensus GCCAGCATTCCGCCGTTGGAGTCATCACATCCCGGTGGCGCGTCTCCTTCAAACCCTCCA
 
. : . : . : . : . : . :
JMFF024E13+ TGAATTCTCATCATCATCTCTCTGAGAGAGAAGAAGCAGGTTAGATGGAGATTGATGATA
JMFF014N03+ TGAATTCTCATCATCATCTCTCTGAGAGAGAAGAAGCAGGTTAGATGGAGATTGATGATA
JMSF006C02+ CTGAGAGAGAAGAAGCAGGTTAGATGGAGATTGATGATA
JMSF018M06+ CTGAGAGAGAAGAAGCAGGTTAGATGGAGATTGATGATA
                      ____________________________________________________________
consensus TGAATTCTCATCATCATCTCTCTGAGAGAGAAGAAGCAGGTTAGATGGAGATTGATGATA
 
. : . : . : . : . : . :
JMFF024E13+ CAGACATCATTTGATCATGGATAAACAGCTTTCTGGGCATAGAGAGTTTGATGATTGATA
JMFF014N03+ CAGACATCATTTGATCATGGATAAACAGCTTTCTGGGCATAGAGAGTTTGATGATTGATA
JMSF006C02+ CAGACATCATTTGATCATGGATAAACAGCTTTCTGGGCATAGAGAGTTTGATGATTGATA
JMSF018M06+ CAGACATCATTTGATCATGGATAAACAGCTTTCTGGGCATAGAGAGTTTGATGATTGATA
                      ____________________________________________________________
consensus CAGACATCATTTGATCATGGATAAACAGCTTTCTGGGCATAGAGAGTTTGATGATTGATA
 
. : . : . : . : . : . :
JMFF024E13+ GATCTTTCATGGAAAACTTTTCTCTCAATCAAACAAGAAACAAAGCTTGCAGGCAGC
JMFF014N03+ GATCTTTCATGGAAAACTTTTCTCTCAATCAAACAAGAAACAAAGCTTGCAGGCAGC
JMSF006C02+ GATCTTTCATGGAAAACTTTTCTCTCAATCAAACAAGAAACAAAGCTTGCAGGCAGC
JMSF018M06+ GATCTTTCATGGAAAACTTTTCTCTCAATCAAACAAGAAACAAAGCTTGCAGGCAGCGTC
                      ____________________________________________________________
consensus GATCTTTCATGGAAAACTTTTCTCTCAATCAAACAAGAAACAAAGCTTGCAGGCAGCGTC