Contig 000708:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005N14Sequence360000708 (3)
JMSF018D03Sequence321000708 (3)791013944 (2)ref|XP_006351887.1|9e-69PREDICTED: ALBINO3-like protein 3, mitochondrial-like isoform X4 [Solanum tuber
JMSF035C06Sequence634000708 (3)ref|XP_010312846.1|2e-21PREDICTED: ALBINO3-like protein 2, chloroplastic [Solanum lycopersicum] ref|XP_0661013944 (2)ref|XP_006351887.1|1e-58PREDICTED: ALBINO3-like protein 3, mitochondrial-like isoform X4 [Solanum tuber

Alignment

This contig is upended


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JMSF035C06+                  CAACATTAGTTTAATTTGGTCTTTGTAACTCTTTCCCTGCCTTGGGGGGTGCA
                      ____________________________________________________________
consensus                    CAACATTAGTTTAATTTGGTCTTTGTAACTCTTTCCCTGCCTTGGGGGGTGCA
 
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JMSF035C06+           GATGGAGAGGGCAAATTGGGAAGTATCTCTCCAATCCTNGTCATCTTGCGGATTAGCAAT
                      ____________________________________________________________
consensus             GATGGAGAGGGCAAATTGGGAAGTATCTCTCCAATCCTNGTCATCTTGCGGATTAGCAAT
 
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JMSF035C06+           ATTATAAAAGGAAATAATGCGAGCCTCATTGCCAATGTCCCAGAAGCAATAACCGCCCAC
                      ____________________________________________________________
consensus             ATTATAAAAGGAAATAATGCGAGCCTCATTGCCAATGTCCCAGAAGCAATAACCGCCCAC
 
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JMSF035C06+           CAAGGGAGCCCGGAGAGGTCGTGGTAGCCATCTACCAACGAAATCATCTTGCTAACGGGA
                      ____________________________________________________________
consensus             CAAGGGAGCCCGGAGAGGTCGTGGTAGCCATCTACCAACGAAATCATCTTGCTAACGGGA
 
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JMSF035C06+           AGAAACAAATCTTCAATATTCCCGCTACTATCCACATCGCCGCCAAGAAACGGGTCTGGC
JMSF005N14+                                                        AGAAACGGGTCTGGC
                      ____________________________________________________________
consensus             AGAAACAAATCTTCAATATTCCCGCTACTATCCACATCGCCGCCAAGAAACGGGTCTGGC
 
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JMSF035C06+           CGCGCAAAGGGTTGAGCAGCCGTCAAGCTGTCATCCTTGAGCGGACAGCCTGCGGCGGAG
JMSF005N14+           CGCGCAAAGGGTTGAGCAGCCGTCAAGCTGTCATCCTTGAGCGGACAGCCTGCGGCGGAG
JMSF018D03+                                                  AGCGGACAGCCTGCGGCGGAG
                      ____________________________________________________________
consensus             CGCGCAAAGGGTTGAGCAGCCGTCAAGCTGTCATCCTTGAGCGGACAGCCTGCGGCGGAG
 
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JMSF035C06+           TCGGACTCGCGAGTGGAGAAAGAACGTGGGGAAGAAATTCCATGGAACGGCGGTAGAAAT
JMSF005N14+           TCGGACTCGCGAGTGGAGAAAGAACGTGGGGAAGAAATTCCATGGAACGGCGGTAGAAAT
JMSF018D03+           TCGGACTCGCGAGTGGAGAAAGAACGTGGGGAAGAAATTCCATGGAACGGCGGTAGAAAT
                      ____________________________________________________________
consensus             TCGGACTCGCGAGTGGAGAAAGAACGTGGGGAAGAAATTCCATGGAACGGCGGTAGAAAT
 
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JMSF035C06+           TGCGGAGCACTAGCAAAAGAAGACGGCGGCACCGGACGGCAGAGAAGATGGTGCAGCCGC
JMSF005N14+           TGCGGAGCACTAGCAAAAGAAGACGGCGGCACCGGACGGCAGAGAAGATGGTGCAGCCGC
JMSF018D03+           TGCGGAGCACTAGCAAAAGAAGACGGCGGCACCGGACGGCAGAGAAGATGGTGCAGCCGC
                      ____________________________________________________________
consensus             TGCGGAGCACTAGCAAAAGAAGACGGCGGCACCGGACGGCAGAGAAGATGGTGCAGCCGC
 
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JMSF035C06+           CGCCGGTGACTGGAACCGTGCGATTGAGTAAAGGAGTGCGGAAAGTAGTATGAGGGTGTG
JMSF005N14+           CGCCGGTGACTGGAACCGTGCGATTGAGTAAAGGAGTGCGGAAAGTAGTATGAGGGTGTG
JMSF018D03+           CGCCGGTGACTGGAACCGTGCGATTGAGTAAAGGAGTGCGGAAAGTAGTATGAGGGTGTG
                      ____________________________________________________________
consensus             CGCCGGTGACTGGAACCGTGCGATTGAGTAAAGGAGTGCGGAAAGTAGTATGAGGGTGTG
 
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JMSF035C06+           GAGGGAACGCGAGGGATGAATCTCCGTTGTAAGAATTTCAGCATTGCCACTTCTGGCAAA
JMSF005N14+           GAGGGAACGCGAGGGATGAATCTCCGTTGTAAGAATTTCAGCATTGCCACTTCTGGCAAA
JMSF018D03+           GAGGGAACGCGAGGGATGAATCTCCGTTGTAAGAATTTCAGCATTGCCACTTCTGGCAAA
                      ____________________________________________________________
consensus             GAGGGAACGCGAGGGATGAATCTCCGTTGTAAGAATTTCAGCATTGCCACTTCTGGCAAA
 
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JMSF035C06+           AGGAGTCTCTGCAAAGTGTGATCGGGGAGTTAACATTTCCC                   
JMSF005N14+           AGGAGTCTCTGCAAAGTGTGATCGGGGAGTTAACATTTCCC                   
JMSF018D03+           AGGAGTCTCTGCAAAGTGTGATCGGGGAGTTAACATTTCCCAATACCCCGCACGCAATTC
                      ____________________________________________________________
consensus             AGGAGTCTCTGCAAAGTGTGATCGGGGAGTTAACATTTCCCAATACCCCGCACGCAATTC