| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002A23 | Sequence | 181 | 000704 (28) | 524 | 000704 (28) | gb|EYU33614.1| | 7e-68 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | |||
| JMFF002B23 | Sequence | 414 | 000704 (28) | gb|EYU33614.1| | 7e-42 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 526 | 000704 (28) | ref|XP_010694233.1| | 2e-56 | PREDICTED: protein translation factor SUI1 homolog [Beta vulgaris subsp. vulgar |
| JMFF005L09 | Sequence | 413 | 000704 (28) | gb|EYU33614.1| | 7e-42 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 656 | 000704 (28) | gb|EYU33614.1| | 1e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMFF016A06 | Sequence | 587 | 000704 (28) | gb|EYU33614.1| | 5e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 715 | 000704 (28) | gb|EYU33614.1| | 2e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMFF017L19 | Sequence | 629 | 000704 (28) | gb|EYU33614.1| | 8e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 735 | 000704 (28) | gb|EYU33614.1| | 3e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMFF033K03 | Sequence | 601 | 000704 (28) | gb|EYU33614.1| | 5e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 719 | 000704 (28) | gb|EYU33614.1| | 2e-70 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMFN004O02 | Sequence | 617 | 000704 (28) | gb|EYU33614.1| | 7e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | |||||
| JMSF003N12 | Sequence | 288 | 000704 (28) | gb|AFK35113.1| | 5e-37 | unknown [Lotus japonicus] gb|AFK48780.1| unknown [Lotus japonicus] | 231 | 000704 (28) | gb|AFK35113.1| | 3e-37 | unknown [Lotus japonicus] gb|AFK48780.1| unknown [Lotus japonicus] |
| JMSF009A19 | Sequence | 264 | 000704 (28) | gb|EEC79466.1| | 4e-08 | hypothetical protein OsI_20483 [Oryza sativa Indica Group] gb|EEE64240.1| hypoth | 687 | 000704 (28) | gb|EYU33614.1| | 2e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMSF013N04 | Sequence | 477 | 000704 (28) | gb|EYU33614.1| | 9e-61 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 633 | 000704 (28) | gb|EYU33614.1| | 8e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMSF017K09 | Sequence | 271 | 000704 (28) | ref|XP_010232448.1| | 5e-33 | PREDICTED: protein translation factor SUI1 homolog 2-like isoform X1 [Brachypod | |||||
| JMSF017L09 | Sequence | 569 | 000704 (28) | gb|EYU33614.1| | 4e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 699 | 000704 (28) | gb|EYU33614.1| | 2e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMSF025E02 | Sequence | 670 | 000704 (28) | gb|EYU33614.1| | 1e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 641 | 000704 (28) | gb|EYU33614.1| | 9e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMSF045O13 | Sequence | 698 | 000704 (28) | gb|EYU33614.1| | 2e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 587 | 000704 (28) | gb|EYU33614.1| | 5e-72 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
| JMSF050E10 | Sequence | 670 | 000704 (28) | gb|EYU33614.1| | 1e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] | 661 | 000704 (28) | gb|EYU33614.1| | 1e-71 | hypothetical protein MIMGU_mgv1a016641mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMFF017L19- TGGTAG
____________________________________________________________
consensus TGGTAG
. : . : . : . : . : . :
rJMFF017L19- GTATCATCATTACTTGCAAATAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
rJMSF050E10- TAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
rJMFF005L09- GTATCATCATTACTTGCAAATAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
rJMFF016A06- GTATCATCATTACTTGCAAATAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
rJMSF009A19- TAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
rJMFF033K03- GTATCATCATTACTTGCAAATAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
JMSF050E10+ TCCCATAACACAAACACGCTGT
rJMSF017L09- TAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
JMSF025E02+ ATCCCATAACACAAACACGCTGT
JMSF045O13+ AGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
____________________________________________________________
consensus GTATCATCATTACTTGCAAATAGACGAAGAGAATAATATCCCATAACACAAACACGCTGT
. : . : . : . : . : . :
rJMFF017L19- CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMSF050E10- CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMFF005L09- CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMFF016A06- CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMSF009A19- CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMFF033K03- CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMSF025E02- GGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMSF013N04- ACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
rJMSF045O13- ATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
JMFN004O02+ TTCCAAATCACTAGAACACCAAAATGTAACTA-TAT
JMSF003N12+ TAGAACACCAAAATGTAACTATTAT
JMSF050E10+ CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
JMFF033K03+ TAT
JMFF017L19+ AATCACTAGAACACCAAAATGTAACTATTAT
JMFF016A06+ TAT
rJMFF002A23- AATCACTAGAACACCAAAATGTANCTATTAT
rJMFF002B23- AATCACTAGAACACCAAAATGTAGCTATTAT
rJMSF017L09- CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
JMSF025E02+ CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
JMSF045O13+ CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
____________________________________________________________
consensus CCAATAGGTAAACAACACAACTTTTTCCAAATCACTAGAACACCAAAATGTAACTATTAT
. : . : . : . : . : . :
rJMFF017L19- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMSF050E10- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMFF005L09- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMFF016A06- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMSF009A19- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMFF033K03- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMSF025E02- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMSF013N04- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMSF045O13- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMFN004O02+ TCAGATAGGAG-TTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMSF003N12+ TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMSF003N12- AACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMSF050E10+ TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMFF033K03+ TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMFF017L19+ TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMFF016A06+ TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
rJMFF002A23- TCNNATANGAGTTTTCANCACAAAGAAAACAAATGGTAACTANGATGCTGATGGCGGTCA
rJMFF002B23- TCTNATANGAGNTTTCANCACAAAGAANACAAATGGTNACTANGATGCTGATGGCGGTCA
rJMSF017L09- TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMSF025E02+ TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMSF045O13+ TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
JMSF017L09+ AAATGGTAACTAGGATGCTGATGGCGGTCA
____________________________________________________________
consensus TCAGATAGGAGTTTTCAGCACAAAGAAAACAAATGGTAACTAGGATGCTGATGGCGGTCA
. : . : . : . : . : . :
rJMFF017L19- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMSF050E10- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMFF005L09- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMFF016A06- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMSF009A19- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMFF033K03- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMSF025E02- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMSF013N04- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMSF045O13- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMFN004O02+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMSF003N12+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMSF003N12- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMSF050E10+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMFF033K03+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMFF017L19+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMFF016A06+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMSF013N04+ GACAAGGAAG
rJMFF002A23- GATCANAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
rJMFF002B23- GATCATAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGANAAGGAAG
rJMSF017L09- GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMSF025E02+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMSF045O13+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
JMSF017L09+ GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
____________________________________________________________
consensus GATCAGAAACCATGAATTTTGATGTGTTCCTTCTTCACAATTCCAGCCTGGACAAGGAAG
. : . : . : . : . : . :
rJMFF017L19- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMSF050E10- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMFF005L09- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMFF016A06- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMSF009A19- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMFF033K03- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTNAGGGTCC
rJMSF025E02- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMSF013N04- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMSF045O13- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMFN004O02+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMSF003N12+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMSF003N12- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMSF050E10+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMFF033K03+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMFF017L19+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMFF016A06+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMSF013N04+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
rJMFF002A23- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTANTTCAGGGTCC
rJMFF002B23- GTAGACACATTCTTCCNCTGGTCACCTTGAAGNTGAATAACCTGGCCTANTTCAGGGTNC
rJMSF017L09- GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMSF025E02+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMSF045O13+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
JMSF017L09+ GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
____________________________________________________________
consensus GTAGACACATTCTTCCGCTGGTCACCTTGAAGTTGAATAACCTGGCCTAGTTCAGGGTCC
. : . : . : . : . : . :
rJMFF017L19- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMSF050E10- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMFF005L09- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMFF016A06- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMSF009A19- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMFF033K03- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMSF025E02- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMSF013N04- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMSF045O13- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMFN004O02+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMSF003N12+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMSF003N12- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMSF050E10+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMFF033K03+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMFF017L19+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMFF016A06+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMSF013N04+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
rJMFF002A23- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAN
rJMFF002B23- TGAACAACGGTTCCATTGNAGCAAAATTCTTTCTTAAGGNCCTTCAATATTNTATTATAA
rJMSF017L09- TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMSF025E02+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMSF045O13+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMFF005L09+ GGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMFF002B23+ CGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
JMSF017K09+ TCCATTGCAGCAAAATTCTTTNTTAAGGTCCTTCAATATTTTATTATAG
JMSF017L09+ TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
____________________________________________________________
consensus TGAACAACGGTTCCATTGCAGCAAAATTCTTTCTTAAGGTCCTTCAATATTTTATTATAG
. : . : . : . : . : . :
rJMFF017L19- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMSF050E10- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMFF005L09- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMFF016A06- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMSF009A19- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMFF033K03- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMSF025E02- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMSF013N04- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMSF045O13- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMFN004O02+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMSF003N12+ CTGAATTCTTTCTTCA
rJMSF003N12- CTGAATTCTTTCTTCA
JMSF050E10+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMFF033K03+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMFF017L19+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMFF016A06+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMSF013N04+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMFF002A23- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMFF002B23- CTGAATTCTTTCTTCAACCCCTGCNCAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
rJMSF017L09- CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMSF025E02+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMSF045O13+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMFF005L09+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMFF002B23+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMSF017K09+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
JMSF017L09+ CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
____________________________________________________________
consensus CTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAAGCTTTTCCTACCATTTCGCTGCTGA
. : . : . : . : . : . :
rJMFF017L19- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMSF050E10- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMFF005L09- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMFF016A06- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMSF009A19- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMFF033K03- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMSF025E02- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMSF013N04- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMSF045O13- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMFN004O02+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMSF050E10+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMFF033K03+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMFF017L19+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMFF016A06+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMSF013N04+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMFF002A23- ACACGAATGTGCACATAATCTTTTGACCCANCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMFF002B23- ACACNAATGTGNACATAATCTTTTGACCCANCACCANAATTTTCANCATTTCCCTCNNCA
JMSF009A19+ TGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
rJMSF017L09- ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMSF025E02+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMSF045O13+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMFF005L09+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMFF002B23+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
JMSF017K09+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATNTTCAGCATTTCCCTNGGCA
JMSF017L09+ ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
____________________________________________________________
consensus ACACGAATGTGCACATAATCTTTTGACCCAGCACCAGAATTTTCAGCATTTCCCTCGGCA
. : . : . : . : . : . :
rJMFF017L19- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGA
rJMSF050E10- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMFF005L09- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMFF016A06- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMSF009A19- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMFF033K03- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMSF025E02- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMSF013N04- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMSF045O13- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMFN004O02+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMSF050E10+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMFF033K03+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMFF017L19+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMFF016A06+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMSF013N04+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMFF002A23- AAAGGATCAAAAGTGGAGGGAATCTGGAGGNCGAGATCNGACATGAAAATTGGCTGATAA
rJMFF002B23- AAAGGATCATNAGTGGAGGGAATCTGGAGGNCGAGATCNGACATGAAAATTGGCTGATAA
JMSF009A19+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
rJMSF017L09- AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMSF025E02+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMSF045O13+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMFF005L09+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMFF002B23+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMSF017K09+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
JMSF017L09+ AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
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consensus AAAGGATCAAAAGTGGAGGGAATCTGGAGGTCGAGATCGGACATGAAAATTGGCTGATAA
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rJMSF050E10- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMFF005L09- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMFF016A06- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMSF009A19- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMFF033K03- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMSF025E02- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMSF013N04- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMSF045O13- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMFN004O02+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMSF050E10+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMFF033K03+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMFF017L19+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMFF016A06+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMSF013N04+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMFF002A23- CTGANAGGCGCTACACACACAAACAAATCCCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMFF002B23- CTGAANGGCGCTACACACACNAACAAATCCCCTGAGCTAATCTTGGATTCTCATGCCTGA
JMSF009A19+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
rJMSF017L09- CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMSF025E02+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMSF045O13+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMFF005L09+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMFF002A23+ CTGAAAGGCGCTACACACNCAAACAAATCCCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMFF002B23+ CTGAAAGGCGCTACACACACAAACAAATCCCCTGAGCTAATCTTGGATTCTCAGGCCTGA
JMSF017K09+ CTGAAAGGCGCTACACACACAAACAAATCTCNTGAGCTAATC
JMSF017L09+ CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
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consensus CTGAAAGGCGCTACACACACAAACAAATCTCCTGAGCTAATCTTGGATTCTCAGGCCTGA
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rJMSF050E10- TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAAAGTGACGATGGAGCAGACCC
rJMFF005L09- TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCA
rJMFF016A06- TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
rJMSF009A19- TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGANAGTGACNATGGAGCANACCC
rJMFF033K03- TCGGGACGTANGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
rJMSF025E02- TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
rJMSF013N04- TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
rJMSF045O13- TCGGGACGTANGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATG
JMFN004O02+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMSF050E10+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMFF033K03+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMFF017L19+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMFF016A06+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMSF013N04+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
rJMFF002A23- TC
rJMFF002B23- TC
JMSF009A19+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
rJMSF017L09- TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMSF025E02+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMSF045O13+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMFF005L09+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMFF002A23+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMFF002B23+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
JMSF017L09+ TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
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consensus TCGGGACGTAGGGTTCGGTGGGGAGGGAGAGATGGCGGAGAGTGACGATGGAGCAGACCC
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rJMSF050E10- TAGATCCGGATAAGGCTGAGA
rJMFF016A06- TAGATCCGGATAAGGCTGAGAGNAGAAAAGTAGTGTGAAACGCCC
rJMSF009A19- TANATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACC
rJMFF033K03- TAGATCCGGATAAGGCTGAGAGAAGAAAAGTAGTGTGAAACGCCCACCGATTGCTACTT
rJMSF025E02- TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACC
rJMSF013N04- TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCC
JMFN004O02+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGT
JMSF050E10+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACC
JMFF033K03+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACTT
JMFF017L19+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACTT
JMFF016A06+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCC
JMSF013N04+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCC
JMSF009A19+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACC
rJMSF017L09- TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACTTC
JMSF025E02+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACC
JMSF045O13+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACTTC
JMFF005L09+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACT
JMFF002A23+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACT
JMFF002B23+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACT
JMSF017L09+ TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACTTC
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consensus TAGATCCGGATAAGGCTGAGAG-AGAAAAGTAGTGTGAAACGCCCACCGATTGCTACTTC