Contig 000696:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008A18Sequence220000696 (2)774008443 (2)ref|XP_009589721.1|357PREDICTED: WD-40 repeat-containing protein MSI1 [Nicotiana tomentosiformis] ref|
JMSF017B09Sequence239000696 (2)817008443 (2)ref|XP_009589721.1|439PREDICTED: WD-40 repeat-containing protein MSI1 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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JMSF008A18+                               TCATCGTCTTTCCCCATGAAAATGACTCCTCAGTTCACAG
JMSF017B09+            TAACTCACCCCTCATCTCGTCATCGTCTTTCCCCATGAAAATGACTCCTCAGTTCACAG
                      ____________________________________________________________
consensus              TAACTCACCCCTCATCTCGTCATCGTCTTTCCCCATGAAAATGACTCCTCAGTTCACAG
 
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JMSF008A18+           AACCGGCGATGGCCGCTGAATTGGAGACGTCGGCGGCGCTGAAGCGCTTGACGGCTTCGA
JMSF017B09+           AACCGGCGATGGCCGCTGAATTGGAGACGTCGGCGGCGCTGAAGCGCTTGACGGCTTCGA
                      ____________________________________________________________
consensus             AACCGGCGATGGCCGCTGAATTGGAGACGTCGGCGGCGCTGAAGCGCTTGACGGCTTCGA
 
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JMSF008A18+           AGACCGTGAATTCCTTGAACTTTATTCGAGCTTTGGAAATGTGAGTAGGAGATTTTGCTC
JMSF017B09+           AGACCGTGAATTCCTTGAACTTTATTCGAGCTTTGGAAATGTGAGTAGGAGATTTTGCTC
                      ____________________________________________________________
consensus             AGACCGTGAATTCCTTGAACTTTATTCGAGCTTTGGAAATGTGAGTAGGAGATTTTGCTC
 
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JMSF008A18+           TCCGCCTATGGAGATTTTGGGAAATTGGAGGGAAGACCAGATTTTGGTGGGTTTTTTGCC
JMSF017B09+           TCCGCCTATGGAGATTTTGGGAAATTGGAGGGAAGACCAGATTTTGGTGGGTTTTTTGCC
                      ____________________________________________________________
consensus             TCCGCCTATGGAGATTTTGGGAAATTGGAGGGAAGACCAGATTTTGGTGGGTTTTTTGCC