clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS029G09 | Sequence | 614 | 000693 (9) | emb|CDP02278.1| | 4e-89 | unnamed protein product [Coffea canephora] | |||||
JMFS056E09 | Sequence | 627 | 000693 (9) | emb|CDP02278.1| | 1e-77 | unnamed protein product [Coffea canephora] | |||||
JMFS069B10 | Sequence | 605 | 000693 (9) | emb|CDP02278.1| | 9e-90 | unnamed protein product [Coffea canephora] | |||||
JMFS073A07 | Sequence | 627 | 000693 (9) | emb|CDP02278.1| | 3e-81 | unnamed protein product [Coffea canephora] | |||||
JMFS095H02 | Sequence | 615 | 000693 (9) | ref|XP_009772947.1| | 1e-76 | PREDICTED: probable ubiquitin conjugation factor E4 [Nicotiana sylvestris] | |||||
JMFS122C11 | Sequence | 565 | 000693 (9) | ref|XP_009589734.1| | 2e-93 | PREDICTED: probable ubiquitin conjugation factor E4 [Nicotiana tomentosiformis] | |||||
JMFS143C10 | Sequence | 626 | 000693 (9) | emb|CDP02278.1| | 1e-89 | unnamed protein product [Coffea canephora] | |||||
JMSF016L04 | Sequence | 508 | 000693 (9) | emb|CDP02278.1| | 4e-45 | unnamed protein product [Coffea canephora] | 721 | 017114 | ref|XP_009777949.1| | 2e-105 | PREDICTED: probable ubiquitin conjugation factor E4 [Nicotiana sylvestris] |
JMSF028G13 | Sequence | 622 | 000693 (9) | emb|CDP02278.1| | 4e-90 | unnamed protein product [Coffea canephora] | 707 | 009997 (5) | ref|XP_004244211.1| | 1e-117 | PREDICTED: lanC-like protein GCL2 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS122C11+ ACACTTGAGCACTTCCGTCAAGCCATCGTATAAGTTGTTCATGAC
____________________________________________________________
consensus ACACTTGAGCACTTCCGTCAAGCCATCGTATAAGTTGTTCATGAC
. : . : . : . : . : . :
JMFS122C11+ AGTTTTGATTGTTGTGAAGGAAGACAATAGATCAGCTGGACGACGTGTTGAAGCATCTGA
____________________________________________________________
consensus AGTTTTGATTGTTGTGAAGGAAGACAATAGATCAGCTGGACGACGTGTTGAAGCATCTGA
. : . : . : . : . : . :
JMFS122C11+ GAAGCACTGCTGGCCAACGTCAGGCTGACTTTTGAATAATGTATTATCAGGTATAGCACT
____________________________________________________________
consensus GAAGCACTGCTGGCCAACGTCAGGCTGACTTTTGAATAATGTATTATCAGGTATAGCACT
. : . : . : . : . : . :
JMFS122C11+ GACATGAAAGAAAGGGCCCAAAATGCTGGTCATCTCAATAACCCTCCCATTCATGTACAT
____________________________________________________________
consensus GACATGAAAGAAAGGGCCCAAAATGCTGGTCATCTCAATAACCCTCCCATTCATGTACAT
. : . : . : . : . : . :
JMFS122C11+ ATTCTTTGGTATCCACCAAGGATGATTCACCAGAGATTTTGCCCCTACTGGATACTTAAC
____________________________________________________________
consensus ATTCTTTGGTATCCACCAAGGATGATTCACCAGAGATTTTGCCCCTACTGGATACTTAAC
. : . : . : . : . : . :
JMFS122C11+ TAATAGCAACAAAGCTCTGAGTGGCTGCTGAAAATTCCCCAAAGCTGATACCTTTAGCAC
____________________________________________________________
consensus TAATAGCAACAAAGCTCTGAGTGGCTGCTGAAAATTCCCCAAAGCTGATACCTTTAGCAC
. : . : . : . : . : . :
JMFS122C11+ ACTTCCTCTCAAATCCTCATACAACTGTTTCAAAATCGGGTCTAGACTATCAAAATCCCC
____________________________________________________________
consensus ACTTCCTCTCAAATCCTCATACAACTGTTTCAAAATCGGGTCTAGACTATCAAAATCCCC
. : . : . : . : . : . :
JMFS122C11+ ATCTTTAAAGAAATCATCAAGAAGCCCTGGTGGACAAGTCACTCCACCACTACTACTACT
JMFS069B10+ ACAAGTCACTCCACCACTACTACTACT
JMFS029G09+ ACAAGTCACTCCACCACTACTACTACT
JMSF028G13+ TACTACT
____________________________________________________________
consensus ATCTTTAAAGAAATCATCAAGAAGCCCTGGTGGACAAGTCACTCCACCACTACTACTACT
. : . : . : . : . : . :
JMFS122C11+ GCCCCCAAACCCATCCACTGCAAGAGAAACCTCGGAGAATATCAAAGGCAGCAAAGGAGA
JMFS069B10+ GCCCCCAAACCCATCCACTGCAAGAGAAACCTCGGAGAATATCAAAGGCAGCAAAGGAGA
JMFS029G09+ GCCCCCAAACCCATCCACTGCAAGAGAAACCTCGGAGAATATCAAAGGCAGCAAAGGAGA
JMSF028G13+ GCCCCCAAACCCATCCACTGCAAGAGAAACCTCGGAGAATATCAAAGGCAGCAAAGGAGA
JMFS143C10+ CAAACCCATCCACTGCAAGAGAAACCTCGGAGAATATCAAAGGCAGCAAAGGAGA
JMFS073A07+ AAGGCAGCAAAGGAGA
____________________________________________________________
consensus GCCCCCAAACCCATCCACTGCAAGAGAAACCTCGGAGAATATCAAAGGCAGCAAAGGAGA
. : . : . : . : . : . :
JMFS122C11+ AACATTGGACGTGTTGGTTTCCCAATTTGGAAACATATCA
JMFS069B10+ AACATTGGACGTGTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
JMFS029G09+ AACATTGNACGTGTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
JMSF028G13+ AACATTGGACGTGTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
JMFS143C10+ AACATTGGACGTGTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
JMFS073A07+ AACATTGGACGTGTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
JMFS056E09+ AACATTGGACGTGTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
JMFS095H02+ GTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
____________________________________________________________
consensus AACATTGGACGTGTTGGTTTCCCAATTTGGAAACATATCAGGGTTCCCTAAATGTATTAT
. : . : . : . : . : . :
JMFS069B10+ ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
JMFS029G09+ ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
JMSF028G13+ ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
JMFS143C10+ ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
JMFS073A07+ ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
JMFS056E09+ ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
JMFS095H02+ ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
____________________________________________________________
consensus ACAGTAGGAAACCGCCAACTTCTTTGCTTGTTTCACCACCAATTCCATCTCAGATCTCAC
. : . : . : . : . : . :
JMFS069B10+ GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
JMFS029G09+ GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
JMSF028G13+ GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
JMFS143C10+ GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
JMFS073A07+ GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
JMFS056E09+ GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
JMFS095H02+ GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
JMSF016L04+ CCTCCTCGTGCGCTCGACGGTAGCAATN
____________________________________________________________
consensus GCTCTTATCTTTCATATTAGCAATCTTCTTCCCCTCCTCGTGCGCTCGACGGTAGCAATT
. : . : . : . : . : . :
JMFS069B10+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
JMFS029G09+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
JMSF028G13+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
JMFS143C10+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
JMFS073A07+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
JMFS056E09+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
JMFS095H02+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
JMSF016L04+ GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
____________________________________________________________
consensus GACTAAATACTGGAATGGCGGCTCGGCGGCAGCGAAGTTCCCAGAAAGTCGATCTATCAG
. : . : . : . : . : . :
JMFS069B10+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
JMFS029G09+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
JMSF028G13+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
JMFS143C10+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
JMFS073A07+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
JMFS056E09+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
JMFS095H02+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
JMSF016L04+ GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
____________________________________________________________
consensus GACTCTCTCCATCAAATCCCTAGACAACCTCAAATCCTTCCCCTCGCTGAGCACCTCAGC
. : . : . : . : . : . :
JMFS069B10+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
JMFS029G09+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
JMSF028G13+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
JMFS143C10+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
JMFS073A07+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
JMFS056E09+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
JMFS095H02+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
JMSF016L04+ CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
____________________________________________________________
consensus CGCTGTCATTTCCAAATACACAAACCTAGAATCATTCTCCATCGAATCGATCAAAGACAC
. : . : . : . : . : . :
JMFS069B10+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
JMFS029G09+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
JMSF028G13+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
JMFS143C10+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
JMFS073A07+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
JMFS056E09+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
JMFS095H02+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
JMSF016L04+ GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
____________________________________________________________
consensus GAGGAAGATTTTCCGGATGATTATATCCTCGATCTCCTCCGGCGTCCTCTGCTGTTTCTG
. : . : . : . : . : . :
JMFS069B10+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
JMFS029G09+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
JMSF028G13+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
JMFS143C10+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
JMFS073A07+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
JMFS056E09+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
JMFS095H02+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
JMSF016L04+ AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
____________________________________________________________
consensus AGTCGCCATGGGTCAACAATCACGGCAATCGAATTCAAATAATCAGGCAAACAATAAAAA
. : . : . : . : . : . :
JMFS069B10+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAA
JMFS029G09+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCT
JMSF028G13+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCTAATAACTGAAACT
JMFS143C10+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCTAATAACTGAAACT
JMFS073A07+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCTAATAACTGAAACT
JMFS056E09+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCTAATAACTGAAACT
JMFS095H02+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCTAATAACTGAAACT
JMSF016L04+ TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCTAATAACTGAAACT
____________________________________________________________
consensus TCGAATTTTGAAGCAGACAATTAGGGTTTTGATCAGAACCCAATGCTAATAACTGAAACT
. : . : . : . : . : . :
JMSF028G13+ GGAACTTTGGGCAT
JMFS143C10+ GGAACTTTGGGCATGATCAAAGTAGATTGTA
JMFS073A07+ GGAACTTTGGGCATGATCAAAGTAGATTGTATGCATATATATATATATAACTGCAGATTG
JMFS056E09+ GGAACTTTGGGCATGATCAAAGTAGATTGTATGCATATATATATATATAACTGCAGATTG
JMFS095H02+ GGAACTTTGGGCATGATCAAAGTAGATTGTATGCATATATATATATATAACTGCAGATTG
JMSF016L04+ GGAACTTTGGGCATGATCAAAGTAGATTGTATGCATATATATATATATAACTGCAGATTG
____________________________________________________________
consensus GGAACTTTGGGCATGATCAAAGTAGATTGTATGCATATATATATATATAACTGCAGATTG
. : . : . : . : . : . :
JMFS073A07+ TAGATATCTGA
JMFS056E09+ TAGATATCTGATATATACTCCGTATAG
JMFS095H02+ TAGATATCTGATATATACTCCGTATAG
JMSF016L04+ TAGATATCTGATATATACTCCGTATAGGATACGAACGTGTAAATACAATATTGTAAACCC
____________________________________________________________
consensus TAGATATCTGATATATACTCCGTATAGGATACGAACGTGTAAATACAATATTGTAAACCC