Contig 000688:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS068D04Sequence627000688 (4)ref|XP_006346139.1|4e-28PREDICTED: axoneme-associated protein mst101(2)-like [Solanum tuberosum]
JMFS121C02Sequence591000688 (4)ref|XP_004244042.1|2e-72PREDICTED: protein DEK [Solanum lycopersicum]
JMFS155A02Sequence623000688 (4)ref|XP_009602972.1|3e-04PREDICTED: DNA ligase 1 [Nicotiana tomentosiformis] ref|XP_009602973.1| PREDICTE
JMSF016D21Sequence241000688 (4)705011731 (2)ref|XP_009773123.1|1e-24PREDICTED: DNA ligase 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS121C02+                             CGGAAACACCATTAGCTTTTCTTTCATGTTCGGGTTCTTCCT
                      ____________________________________________________________
consensus                               CGGAAACACCATTAGCTTTTCTTTCATGTTCGGGTTCTTCCT
 
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JMFS121C02+           CTGAGTCATTTTCTGATTCATGTACGTCCTTCTTCTTCTCACCCTTCTTAGATGCACTCT
                      ____________________________________________________________
consensus             CTGAGTCATTTTCTGATTCATGTACGTCCTTCTTCTTCTCACCCTTCTTAGATGCACTCT
 
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JMFS121C02+           CAGTCTTGCGACTCTTAGCTGAGCCTTTTGAACTTCCAGAAGCAGAGGATCCACTTTTAT
                      ____________________________________________________________
consensus             CAGTCTTGCGACTCTTAGCTGAGCCTTTTGAACTTCCAGAAGCAGAGGATCCACTTTTAT
 
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JMFS121C02+           TGCTAGCCCTCTTACGCTTTCCCTTGCTTGACTGCTCTTTTTCAGCAAGCAGTTCAGAAG
                      ____________________________________________________________
consensus             TGCTAGCCCTCTTACGCTTTCCCTTGCTTGACTGCTCTTTTTCAGCAAGCAGTTCAGAAG
 
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JMFS121C02+           TCGTAGCATGAGGTGCCTCCAAAAATTCCATCAACTTTACAACTACATCTTCCTTCTTTG
                      ____________________________________________________________
consensus             TCGTAGCATGAGGTGCCTCCAAAAATTCCATCAACTTTACAACTACATCTTCCTTCTTTG
 
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JMFS121C02+           ATGTAGCCTTGGCAACAGGTATGTCAAGTATATCACAGAATTCCATCAATTTCTCTTTTA
                      ____________________________________________________________
consensus             ATGTAGCCTTGGCAACAGGTATGTCAAGTATATCACAGAATTCCATCAATTTCTCTTTTA
 
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JMFS121C02+           CACACTTGTCAAATTTTTCTTTAACCTTCATCCTTTGCTTTTCCTCATTGTCATGCCACA
                      ____________________________________________________________
consensus             CACACTTGTCAAATTTTTCTTTAACCTTCATCCTTTGCTTTTCCTCATTGTCATGCCACA
 
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JMFS121C02+           CAAAGCCAGAAAACCGTGACAAGTGATTCTTAAATTGAGCTGCCTTTCCTCTCCTTCCAA
                      ____________________________________________________________
consensus             CAAAGCCAGAAAACCGTGACAAGTGATTCTTAAATTGAGCTGCCTTTCCTCTCCTTCCAA
 
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JMFS121C02+           AGAGTATTGAATGTAGCATCTTGAATGAATCCTCAGTCTTCTTTCTGGATAATTTATATG
JMFS068D04+                    AATGTAGCATCTTGAATGAATCCTCAGTCTTCTTTCTGGATAATTTATATG
                      ____________________________________________________________
consensus             AGAGTATTGAATGTAGCATCTTGAATGAATCCTCAGTCTTCTTTCTGGATAATTTATATG
 
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JMFS121C02+           CCACATTTGGTATGTCCTTCAGTGCAGTTCCACGACCCTTTTCTACACGGAATTCCTTGA
JMFS068D04+           CCACATTTGGTATGTCCTTCAGTGCAGTTCCACGACCCTTTTCTACACGGAATTCCTTGA
                      ____________________________________________________________
consensus             CCACATTTGGTATGTCCTTCAGTGCAGTTCCACGACCCTTTTCTACACGGAATTCCTTGA
 
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JMFS121C02+           CAGCATCTT                                                   
JMFS068D04+           CAGCATCTTTCTCAATGGATGCAACTAGCCTTTCAACTGATTTTCGTTAACGGACAGGAC
                      ____________________________________________________________
consensus             CAGCATCTTTCTCAATGGATGCAACTAGCCTTTCAACTGATTTTCGTTAACGGACAGGAC
 
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JMFS068D04+           GGTCAATAGTAGGTGGCATGGGAGTTCTCGGTTCCTTCTCCTTCTTATCTTCCACTGCCT
                      ____________________________________________________________
consensus             GGTCAATAGTAGGTGGCATGGGAGTTCTCGGTTCCTTCTCCTTCTTATCTTCCACTGCCT
 
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JMFS068D04+           TTTTCTTCTTTTTGTCTTTCTCCACAGAATTGCTTTTTGATTTAGCATTCTTCTTTGACC
                      ____________________________________________________________
consensus             TTTTCTTCTTTTTGTCTTTCTCCACAGAATTGCTTTTTGATTTAGCATTCTTCTTTGACC
 
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JMFS068D04+           CTTTCCCAGCAGTAGGCTTAGGCTCTTCCGCAGTATCCTGTTCTTTTTCCTCCTTCACTG
JMFS155A02+                                     TCCGCAGTATCCTGTTCTTTTTCCTCCTTCACTG
                      ____________________________________________________________
consensus             CTTTCCCAGCAGTAGGCTTAGGCTCTTCCGCAGTATCCTGTTCTTTTTCCTCCTTCACTG
 
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JMFS068D04+           CATCAGCCTCTTTTTCAACTTTACCCTCATCCTCATCCTCATCCTCATCCAGTTTTTCCT
JMFS155A02+           CATCAGCCTCTTTTTCAACTTTACCCTCATCCTCATCCTCATCCTCATCCAGTTTTTCCT
                      ____________________________________________________________
consensus             CATCAGCCTCTTTTTCAACTTTACCCTCATCCTCATCCTCATCCTCATCCAGTTTTTCCT
 
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JMFS068D04+           CAGCTTCCTCTTCATCCATTGCCTCACCCTTGTCCTCCAATTTATCATCCTCCACTTTTC
JMFS155A02+           CAGCTTCCTCTTCATCCATTGCCTCACCCTTGTCCTCCAATTTATCATCCTCCACTTTTC
                      ____________________________________________________________
consensus             CAGCTTCCTCTTCATCCATTGCCTCACCCTTGTCCTCCAATTTATCATCCTCCACTTTTC
 
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JMFS068D04+           CTTCCTCATCTCCCTTTTCTTCTTTTCCTTCTTCATCATTGCTTTCCTCGTTTCCTTCCT
JMFS155A02+           CTTCCTCATCTCCCTTTTCTTCTTTTCCTTCTTCATCATTGCTTTCCTCGTTTCCTTCCT
                      ____________________________________________________________
consensus             CTTCCTCATCTCCCTTTTCTTCTTTTCCTTCTTCATCATTGCTTTCCTCGTTTCCTTCCT
 
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JMFS068D04+           CATCTCCCTTTTCTTCTTTTCCTTCCTCATCTTTGCTTTCCTCGTTTTCCTTCACCTGTC
JMFS155A02+           CATCTCCCTTTTCTTCTTTTCCTTCCTCATCTTTGCTTTCCTCGTTTTCCTTCACCTGTC
                      ____________________________________________________________
consensus             CATCTCCCTTTTCTTCTTTTCCTTCCTCATCTTTGCTTTCCTCGTTTTCCTTCACCTGTC
 
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JMFS068D04+           CTTCATCTACATCCATTTTATCAGCATCCAC                             
JMFS155A02+           CTTCATCTACATCCATTTTATCAGCATCCACCTTATCACTCTCCTGCTTACTATCTTCCT
                      ____________________________________________________________
consensus             CTTCATCTACATCCATTTTATCAGCATCCACCTTATCACTCTCCTGCTTACTATCTTCCT
 
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JMFS155A02+           CCATCTCCTTTACACCACTGTCCCCAGTGTCCTTCTTCTCCACAGAAGCTTCACTCTTTT
JMSF016D21+                                                                      T
                      ____________________________________________________________
consensus             CCATCTCCTTTACACCACTGTCCCCAGTGTCCTTCTTCTCCACAGAAGCTTCACTCTTTT
 
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JMFS155A02+           CCTCCGGTGCTGCATTACCATTCACAGTTGACTCCGGCAATTCAGATACAGTATCTCCCT
JMSF016D21+           CCTCCGGTGCTGCATTACCATTCACAGTNGACTCCGGCAATTCAGATACAGTATCTCCCT
                      ____________________________________________________________
consensus             CCTCCGGTGCTGCATTACCATTCACAGTTGACTCCGGCAATTCAGATACAGTATCTCCCT
 
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JMFS155A02+           CCCCCATAACTTACAGCAGCAGAAGCAGTACACCAACACAAAATCTTCTCTCCCAATACG
JMSF016D21+           CCCCCATAACTTACAGCAGCAGAAGCAGTACACCAACACAAAATCTTCTCTCCCAATACG
                      ____________________________________________________________
consensus             CCCCCATAACTTACAGCAGCAGAAGCAGTACACCAACACAAAATCTTCTCTCCCAATACG
 
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JMFS155A02+           AAAAACGAGATTTAGAGAGCTGAATTCCACGGCTTTGAGGGCTAACACTCACTCACACTC
JMSF016D21+           AAAAACGAGATTTAGAGAGCTGAATTCCACGGCTTTGAGGGCTAACACTCACTCACACTC
                      ____________________________________________________________
consensus             AAAAACGAGATTTAGAGAGCTGAATTCCACGGCTTTGAGGGCTAACACTCACTCACACTC
 
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JMFS155A02+           GTATCAGTGGTTTGTATTTGCCTTTTTTTCTCTCTTTTCAACGATTCCA           
JMSF016D21+           GTATCAGTGGTTTGTATTTGCCTTTTTTTCTCTCTTTTCAACGATTCCACACTTCGAATC
                      ____________________________________________________________
consensus             GTATCAGTGGTTTGTATTTGCCTTTTTTTCTCTCTTTTCAACGATTCCACACTTCGAATC