Contig 000685:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022G19Sequence462004856 (7)emb|CDO98283.1|3e-82unnamed protein product [Coffea canephora]710000685 (3)ref|XP_004235862.1|3e-29PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Solanum ly
JMSF015L21Sequence146000685 (3)
JMSF046A14Sequence511019017ref|XP_011082808.1|4e-94PREDICTED: staphylococcal nuclease domain-containing protein 1 [Sesamum indicum616000685 (3)ref|XP_004235862.1|4e-17PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Solanum ly

Alignment

This contig is upended


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rJMFF022G19+                                        ATTAAGGTTCCCGGTTTNGGAAGATGATTA
                      ____________________________________________________________
consensus                                           ATTAAGGTTCCCGGTTTNGGAAGATGATTA
 
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rJMSF046A14+                                                                 TTCAA
rJMFF022G19+          TGGACAAGAGGCTGCAATCCATCTAAGTGAGCTCATCCTTAATGCTCCCAAGGAATTCAA
                      ____________________________________________________________
consensus             TGGACAAGAGGCTGCAATCCATCTAAGTGAGCTCATCCTTAATGCTCCCAAGGAATTCAA
 
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rJMSF046A14+          GGCTGTGATTGAGGAAAAGGACACATCAGGTGGAAAAGTCAAGGGACAAGGAACGGGTAC
rJMFF022G19+          GGCTGTGATTGAGGAAAAGGACACATCAGGTGGAAAAGTCAAGGGACAAGGAACGGGTAC
                      ____________________________________________________________
consensus             GGCTGTGATTGAGGAAAAGGACACATCAGGTGGAAAAGTCAAGGGACAAGGAACGGGTAC
 
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rJMSF046A14+          CGTCTTTATGGTTACTTTGGTTGATCCCGAAGCTGATGTCAGCATTAATGCTATGTTGCT
rJMFF022G19+          CGTCTTTATGGTTACTTTGGTTGATCCCGAAGCTGATGTCAGCATTAATGCTATGTTGCT
                      ____________________________________________________________
consensus             CGTCTTTATGGTTACTTTGGTTGATCCCGAAGCTGATGTCAGCATTAATGCTATGTTGCT
 
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rJMSF046A14+          GAAGGATGGAGTGGCTAGGTTGGAAAAGAGGAGAAGATGGATTCCCAAAGAGAGTCTAGA
rJMFF022G19+          GAAGGATGGAGTGGCTAGGTTGGAAAAGAGGAGAAGATGGATTCCCAAAGAGAGTCTAGA
                      ____________________________________________________________
consensus             GAAGGATGGAGTGGCTAGGTTGGAAAAGAGGAGAAGATGGATTCCCAAAGAGAGTCTAGA
 
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rJMSF046A14+          GGAATTGGAAAAAGCCGAGAAGGAAGCACGCGAGAAGAGGCGTGGAATGTGGGAGTATGG
rJMFF022G19+          GGAATTGGAAAAAGCCGAGAAGGAAGCACGCGAGAAGAGGCGTGGAATGTGGGAGTATGG
                      ____________________________________________________________
consensus             GGAATTGGAAAAAGCCGAGAAGGAAGCACGCGAGAAGAGGCGTGGAATGTGGGAGTATGG
 
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rJMSF046A14+          AGATGTTGATTCTGACGATGAAGTGTCAGCTGCGCCCCCTGCTAGGAAAGCTGCCGGCAA
rJMFF022G19+          AGATGTTGATTCTGACGATGAAGTGTCAGCTGCGCCCCCTGCTAGGAAAGCTGCCGGCAA
                      ____________________________________________________________
consensus             AGATGTTGATTCTGACGATGAAGTGTCAGCTGCGCCCCCTGCTAGGAAAGCTGCCGGCAA
 
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rJMSF046A14+          ACGCTGAGCAGTTTGTGGTTTTGTAACAATTATGTAGAGGGAGGTTCCTTTCTACTGCCA
rJMFF022G19+          ACGCTGAGCAGTTTGTGGTTTTGTAACAATTATGTAGAGGGAGGTTCCTTTCTACTGCCA
                      ____________________________________________________________
consensus             ACGCTGAGCAGTTTGTGGTTTTGTAACAATTATGTAGAGGGAGGTTCCTTTCTACTGCCA
 
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rJMSF046A14+          GGCACAACCGTGGTAAAATTACAGGTAAGAAAATTGCTGTTCTGTACTTTGAGAGAATAG
rJMFF022G19+          GGCACAACCGTGGTAAAATTACAGGTAAGAAAATTGCTGTTCTGTACTTTGAGAGAATAG
                      ____________________________________________________________
consensus             GGCACAACCGTGGTAAAATTACAGGTAAGAAAATTGCTGTTCTGTACTTTGAGAGAATAG
 
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rJMSF046A14+          AAAGAGGATGCGTTGTTAGCTTTCTATAATTTTGGTTCTTTTTGTAACTTAGGAAGTGAC
rJMFF022G19+          AAAGAGGATGCGTTGTTAGCTTTCTATAATTTTGGTTCTTTTTGTAACTTAGGAAGTGAC
                      ____________________________________________________________
consensus             AAAGAGGATGCGTTGTTAGCTTTCTATAATTTTGGTTCTTTTTGTAACTTAGGAAGTGAC
 
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rJMSF046A14+          TTCTTGAGAGACAAATTTTGTTTAGTTTTTAGCTTTAGTTTAATTTTTTAAATTTGTTAA
rJMFF022G19+          TTCTTGAGAGACAAATTTTGTTTAGTTTTTAGCTTTAGTTTAATTTTTTAAATTTGTTAA
JMSF015L21-                                          GCTTTAGTTTAATTTTTTAAATTT-TTAA
                      ____________________________________________________________
consensus             TTCTTGAGAGACAAATTTTGTTTAGTTTTTAGCTTTAGTTTAATTTTTTAAATTTGTTAA
 
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rJMSF046A14+          ATTATACTACAGTAGTAAATAACGGGAACCCCCGAATGTAACTTAANCAAGGATGTGACT
rJMFF022G19+          ATTATACTACAGTAGTAAATAA-GGGAACCCCCGAATGTAACTTAA-CAAGGATGTGACT
JMSF015L21-           ATTATACTACAGTAGTAAATAA-GGGAACCCCCGAATGTAACTTAA-CAAGGATGTGACT
                      ____________________________________________________________
consensus             ATTATACTACAGTAGTAAATAA-GGGAACCCCCGAATGTAACTTAA-CAAGGATGTGACT
 
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rJMSF046A14+          TCTCGGAGTGC                                                 
rJMFF022G19+          TCTCGGAGTGCTTCAGAGACAA                                      
JMSF015L21-           TCTCGGAGTGCTTCAGAGACAAATTTTGTTTTTAATGTGTTCCATTTCCTAANAAAAAAA
                      ____________________________________________________________
consensus             TCTCGGAGTGCTTCAGAGACAAATTTTGTTTTTAATGTGTTCCATTTCCTAANAAAAAAA