Contig 000683:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN041J09Sequence615000683 (18)ref|XP_009778027.1|5e-83PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris
JMFS142H09Sequence626000683 (18)ref|XP_009778027.1|5e-83PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris
JMSF006I01Sequence383000683 (18)ref|XP_009778027.1|1e-60PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris
JMSF010E10Sequence501000683 (18)gb|KDP30968.1|7e-58hypothetical protein JCGZ_11344 [Jatropha curcas]717000683 (18)ref|XP_009778027.1|2e-113PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris
JMSF015H16Sequence538000683 (18)gb|KDP30968.1|1e-66hypothetical protein JCGZ_11344 [Jatropha curcas]776000683 (18)ref|XP_009778027.1|5e-114PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris
JMSF018P01Sequence388000683 (18)ref|XP_009603202.1|4e-32PREDICTED: nucleoside diphosphate kinase 2, chloroplastic-like [Nicotiana tomen715000683 (18)sp|Q852S5.1|NDK2_TOBAC3e-112RecName: Full=Nucleoside diphosphate kinase 2, chloroplastic; AltName: Full=Nuc
JMSF029I14Sequence641000683 (18)ref|XP_009778027.1|4e-93PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris767000683 (18)ref|XP_009778027.1|4e-114PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris
JMSF039N09Sequence641000683 (18)ref|XP_009778027.1|3e-93PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris880000683 (18)ref|XP_009778027.1|3e-98PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris
JMSF041I14Sequence815000683 (18)sp|Q852S5.1|NDK2_TOBAC1e-113RecName: Full=Nucleoside diphosphate kinase 2, chloroplastic; AltName: Full=Nuc144015132
JMSF041J14Sequence797000683 (18)sp|Q852S5.1|NDK2_TOBAC1e-113RecName: Full=Nucleoside diphosphate kinase 2, chloroplastic; AltName: Full=Nuc616000683 (18)sp|Q852S5.1|NDK2_TOBAC1e-97RecName: Full=Nucleoside diphosphate kinase 2, chloroplastic; AltName: Full=Nuc
JMSF050A21Sequence666000683 (18)ref|XP_009778027.1|4e-101PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris687000683 (18)ref|XP_009778027.1|7e-113PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Nicotiana sylvestris

Alignment

This contig is upended


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rJMSF029I14-                            ATCCTTTGTGTCCCTTATCCTGAAAAAATTTATTGATAAGAA
rJMSF018P01-                             TCCTTTGTGTCCCTTATCCTGAAAAAATTTATTGATAAGAA
rJMSF041J14-                            ATCCTTTGTGTCCCTTATCCTGAAAAAATTTATTGATAAGAA
rJMSF015H16-                      GGATTAATCCTTTGTGTCCCTTATCCTGAAAAAATTTATTGATAAGAA
rJMSF039N09-                            ATCCTTTGTGTCCCTTATCCTGAAAAAATTTATTGATAAGAA
                      ____________________________________________________________
consensus                         GGATTAATCCTTTGTGTCCCTTATCCTGAAAAAATTTATTGATAAGAA
 
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rJMSF029I14-          ATGGTGTATTGTCAGTTTGAAACAAACGAACATATCTCCAGTTCACAGACAGACATGTAA
rJMSF018P01-          ATGGTGTATTGTCAGTTTGAAACAAACGAACATATCTCCAGTTCACAGACAGACATGTAA
rJMSF041J14-          ATGGTGTATTGTCAGTTTGAAACAAACGAACATATCTCCAGTTCACAGACAGACATGTAA
rJMSF015H16-          ATGGTGTATTGTCAGTTTGAAACAAACGAACATATCTCCAGTTCACAGACAGACATGTAA
rJMSF050A21-                                                                  GTAA
rJMSF010E10-                 ATTGTCAGTTTGAAACAAACGAACATATCTCCAGTTCACAGACAGACATGTAA
rJMSF039N09-          ATGGTGTATTGTCAGTTTGAAACAAACGAACATATCTCCAGTTCACAGACAGACATGTAA
JMSF041I14+                                   AACGAACATATCTCCAGTTCACAGACAGACATGTAA
JMSF041J14+                                                     TCACAGACAGACATGTAA
                      ____________________________________________________________
consensus             ATGGTGTATTGTCAGTTTGAAACAAACGAACATATCTCCAGTTCACAGACAGACATGTAA
 
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rJMSF029I14-          TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
rJMSF018P01-          TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
rJMSF041J14-          TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
rJMSF015H16-          TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
rJMSF050A21-          TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
rJMSF010E10-          TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
rJMSF039N09-          TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
JMSF041I14+           TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
JMSF041J14+           TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
                      ____________________________________________________________
consensus             TATCTCTCGACCAAAAACGAACAAATCACTGCATCTCGCCTTGATTGGAACTATTCTATC
 
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rJMSF029I14-          AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
rJMSF018P01-          AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
rJMSF041J14-          AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
rJMSF015H16-          AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
rJMSF050A21-          AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
rJMSF010E10-          AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
rJMSF039N09-          AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAA-CACAGAGCT
JMSF041I14+           AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
JMSF050A21+                                                       TTTGAACCACAGAGCT
JMSF041J14+           AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
                      ____________________________________________________________
consensus             AACCACGGTTCTTGAGTTGGTGTCCATTCGCATAATTCTCCTTCTTTGAACCACAGAGCT
 
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rJMSF029I14-          ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
rJMSF018P01-          ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
rJMSF041J14-          ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
rJMSF015H16-          ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
rJMSF050A21-          ATTTCGCGTTTGCCATTCTCAGGGCTGTCCCTTCCATGCACCACATTCCTTCCAGTTTGA
rJMSF010E10-          ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
rJMSF039N09-          ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
JMSF039N09+                             TCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
JMSF041I14+           ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
JMSF050A21+           ATTTCGCGTTTGCCATTCTCAGGGCTGTCCCTTCCATGCACCACATTCCTTCCAGTTTGA
JMSF041J14+           ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
JMFS142H09+                                 GGCTGTCACTTCCATGCACCACATTCCTTCCAG-TTGA
JMFN041J09+                              CAGGGCTGTCACTTCCATGCACCACATTCCTTCCAG-TTGA
JMSF029I14+                             TCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
                      ____________________________________________________________
consensus             ATTTCGCGTTTGCCATTCTCAGGGCTGTCACTTCCATGCACCACATTCCTTCCAGTTTGA
 
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rJMSF029I14-          ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
rJMSF018P01-          ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
rJMSF041J14-          ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
rJMSF015H16-          ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
rJMSF050A21-          ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
rJMSF010E10-          ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
rJMSF039N09-          ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
JMSF039N09+           ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
JMSF041I14+           ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
JMSF050A21+           ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
JMSF041J14+           ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
JMFS142H09+           ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
JMFN041J09+           ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
JMSF029I14+           ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
                      ____________________________________________________________
consensus             ACAGAAAGGTCTCCTCTGATTGTGCCCGGTTCAGCATTAAGAGGATTTGTAGCTCCTATT
 
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rJMSF029I14-          AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
rJMSF018P01-          AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
rJMSF041J14-          AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
rJMSF015H16-          AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
rJMSF050A21-          AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
rJMSF010E10-          AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
rJMSF039N09-          AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMSF039N09+           AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMSF041I14+           AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMSF050A21+           AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMSF041J14+           AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMFS142H09+           AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMFN041J09+           AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMSF029I14+           AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
JMSF010E10+                                                AAGCCATACACACAACAGGACCA
JMSF006I01-                                        GCCCTCCCAAGCCATACACACAACAGGACCA
JMSF015H16+            ACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
                      ____________________________________________________________
consensus             AACTTCCGGGCTGATGCAACAACACCGATGCCCTCCCAAGCCATACACACAACAGGACCA
 
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rJMSF029I14-          GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
rJMSF018P01-          GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
rJMSF041J14-          GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
rJMSF015H16-          GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
rJMSF050A21-          GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
rJMSF010E10-          GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
rJMSF039N09-          GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF039N09+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF041I14+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF050A21+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF041J14+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMFS142H09+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMFN041J09+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF029I14+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF010E10+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF006I01-           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
JMSF015H16+           GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
                      ____________________________________________________________
consensus             GACGTAATGTACTTGATCAGCTTCGGAAAGAATGGCTTCGATTGCAGATCCTTGTAATGC
 
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rJMSF029I14-          TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
rJMSF018P01-          TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
rJMSF041J14-          TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
rJMSF015H16-          TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
rJMSF050A21-          TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
rJMSF010E10-          TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
rJMSF039N09-          TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF039N09+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF041I14+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF050A21+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF041J14+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMFS142H09+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMFN041J09+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF029I14+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF010E10+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF018P01+                                       AGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF006I01-           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
JMSF015H16+           TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
                      ____________________________________________________________
consensus             TCCTCTGCCAATTCATTGGGGCATTGAAAGAGCTTTAGCGCTGTTAGCTTAAATCCCTTT
 
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rJMSF029I14-          CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
rJMSF018P01-          CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
rJMSF041J14-          CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
rJMSF015H16-          CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
rJMSF050A21-          CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
rJMSF010E10-          CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
rJMSF039N09-          CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF039N09+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF041I14+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF050A21+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF041J14+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMFS142H09+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMFN041J09+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF029I14+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF010E10+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF018P01+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF006I01-           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
JMSF015H16+           CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
                      ____________________________________________________________
consensus             CTCTCAAACCTAGAAATTATCTCTCCAACAAGGCCCCTCTGGACACCATCTGGCTTAATC
 
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rJMSF029I14-          ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
rJMSF018P01-          ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
rJMSF041J14-          ATAATGTAAGTCTGCTGCACTTCTTCCAGGG                             
rJMSF015H16-          ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
rJMSF050A21-          ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
rJMSF010E10-          ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
rJMSF039N09-          ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF039N09+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF041I14+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF050A21+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF041J14+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMFS142H09+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMFN041J09+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF029I14+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF010E10+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF018P01+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF006I01-           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
JMSF015H16+           ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
                      ____________________________________________________________
consensus             ATAATGTAAGTCTGCTGCACTTCTTCCAGGGAAGCAACCAAGTGAGGAAGAAAGACATGA
 
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rJMSF029I14-          TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
rJMSF018P01-          TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
rJMSF015H16-          TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
rJMSF050A21-          TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
rJMSF010E10-          TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
rJMSF039N09-          TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF039N09+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF041I14+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF050A21+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF041J14+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMFS142H09+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMFN041J09+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF029I14+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF010E10+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF018P01+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF006I01-           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
JMSF015H16+           TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
                      ____________________________________________________________
consensus             TTTTTCCGGTGGGTATGAGGGCGAGATGGGGAGTATGAGAAGAGACGGGATACTGGTTTG
 
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rJMSF029I14-          AATGATGATAGGTGGTGGTAGTTGNTTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
rJMSF018P01-          AATGATGATAGGTG                                              
rJMSF015H16-          AATGATGATAGGTGGTGGTAGTTGNTTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
rJMSF050A21-          AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGT    
rJMSF010E10-          AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
rJMSF039N09-          AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF039N09+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF041I14+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF050A21+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF041J14+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMFS142H09+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMFN041J09+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF029I14+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF010E10+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF018P01+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
JMSF006I01-           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATA       
JMSF015H16+           AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
                      ____________________________________________________________
consensus             AATGATGATAGGTGGTGGTAGTTG-TTGTTGTTGGCGGCGGCGCGTGCGGATAGGTTCCA
 
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rJMSF029I14-          G                                                           
rJMSF015H16-          GGAGGGAG                                                    
rJMSF010E10-          GGAGG                                                       
rJMSF039N09-          GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF039N09+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF041I14+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF050A21+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF041J14+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMFS142H09+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMFN041J09+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF029I14+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF010E10+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF018P01+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
JMSF015H16+           GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
                      ____________________________________________________________
consensus             GGAGGGAGCGTAGGATAAGGTATTGGGTGACGGGTAAGAAGCAGAGAGTGAAGAAGAAAC
 
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rJMSF039N09-          GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCT  
JMSF039N09+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCT  
JMSF041I14+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCTCC
JMSF050A21+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCT          
JMSF041J14+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCTCC
JMFS142H09+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCT          
JMFN041J09+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTC                        
JMSF029I14+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCTCC
JMSF010E10+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCT  
JMSF018P01+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTC   
JMSF015H16+           GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCTCC
                      ____________________________________________________________
consensus             GCGAGGTGTGGCAGAACCCACCAACGTTAGAGCTTCCATTCTCCGTCTCTGTCGCTCTCC