Contig 000682:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF032N03-                                                           ACTTGTATTCA
                      ____________________________________________________________
consensus                                                              ACTTGTATTCA
 
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rJMFF032N03-          ATGGGTTTCCCAGGAAAAGTTGACTAATCCAGGTTTGCAACTTATTACATCTTAATTCCA
                      ____________________________________________________________
consensus             ATGGGTTTCCCAGGAAAAGTTGACTAATCCAGGTTTGCAACTTATTACATCTTAATTCCA
 
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rJMFF032N03-          AATATGTAACTAGTGAGAATGTCAAAACCTTTCATACTCAATTAGTTACCCGTATCCTTC
                      ____________________________________________________________
consensus             AATATGTAACTAGTGAGAATGTCAAAACCTTTCATACTCAATTAGTTACCCGTATCCTTC
 
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rJMFF032N03-          AAAGACATCCGATAAAATTGGAATGATATGCAGAAGATTAGCATAGCCCCTGTCAATTGG
rJMSF015H07-                                                          CCTGTCAATTGG
                      ____________________________________________________________
consensus             AAAGACATCCGATAAAATTGGAATGATATGCAGAAGATTAGCATAGCCCCTGTCAATTGG
 
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rJMFF032N03-          TAGGACAACTGACAAATCAATTTGGTGAAGCCTTCATTTTATTATGACACTCGTGCATTA
rJMSF015H07-          TAGGACAACTGACAAATCAATTTGGTGAAGCCTTCATTTTATTATGACACTCGTGCATTA
                      ____________________________________________________________
consensus             TAGGACAACTGACAAATCAATTTGGTGAAGCCTTCATTTTATTATGACACTCGTGCATTA
 
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rJMFF032N03-          GCTAATGAACTGCAGACCACTACACCCGCTGGTGCTCGCATATAATATGAACCAAGCGTA
rJMSF015H07-          GCTAATGAACTGCAGACCACTACACCCGCTGGTGCTCGCATATAATATGAACCAAGCGTA
                      ____________________________________________________________
consensus             GCTAATGAACTGCAGACCACTACACCCGCTGGTGCTCGCATATAATATGAACCAAGCGTA
 
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rJMFF032N03-          GCAACACAAGTGTCATTGGTTTTGAGATGTGGTTGCACTAATTCCCAAACCTTTTTCTTC
rJMSF015H07-          GCAACACAAGTGTCATTGGTTTTGAGATGTGGTTGCACTAATTCCCAAACCTTTTTCTTC
                      ____________________________________________________________
consensus             GCAACACAAGTGTCATTGGTTTTGAGATGTGGTTGCACTAATTCCCAAACCTTTTTCTTC
 
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rJMFF032N03-          TGAACCTGATTTGGTGTTGCAGCCTCAGGTAATTTGTCATTCTCATCATCCAAACCAAAC
rJMSF015H07-          TGAACCTGATTTGGTGTTGCAGCCTCAGGTAATTTGTCATTCTCATCATCCAAACCAAAC
                      ____________________________________________________________
consensus             TGAACCTGATTTGGTGTTGCAGCCTCAGGTAATTTGTCATTCTCATCATCCAAACCAAAC
 
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rJMFF032N03-          CATACCCTTTCACCAGGAACTGAACCCTCAGGTGGCAGGAGGAGCTCAACATTCTGGTGC
rJMSF015H07-          CATACCCTTTCACCAGGAACTGAACCCTCAGGTGGCAGGAGGAGCTCAACATTCTGGTGC
                      ____________________________________________________________
consensus             CATACCCTTTCACCAGGAACTGAACCCTCAGGTGGCAGGAGGAGCTCAACATTCTGGTGC
 
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rJMFF032N03-          GACTCATCAGAAGCAGCCATCAGCATCCCACAGGATTTGACACCACGCATATTTCTTGGC
rJMSF015H07-          GACTCATCAGAAGCAGCCATCAGCATCCCACAGGATTTGACACCACGCATATTTCTTGGC
                      ____________________________________________________________
consensus             GACTCATCAGAAGCAGCCATCAGCATCCCACAGGATTTGACACCACGCATATTTCTTGGC
 
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rJMFF032N03-          TTCAAATTAGCAAGGACAATGACATGCCTGTCCTGAAGATGTTGGAGGGGGACATAATTA
rJMSF015H07-          TTCAAATTAGCAAGGACAATGACATGCCTGTCCTGAAGATGTTGGAGGGGGACATAATTA
JMFF032N03+             CAAATTAGCAAGGACAATGACATGCCTGTCCTGAAGATGTNGGAGGGGGACATAATTA
JMFS148D08+             CAAATTAGCAAGGACAATGACATGCCTGTCCTGAAGATGT-GGAGGGGGACATAATTA
                      ____________________________________________________________
consensus             TTCAAATTAGCAAGGACAATGACATGCCTGTCCTGAAGATGTTGGAGGGGGACATAATTA
 
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rJMFF032N03-          ACAAGGCCGCTGCAGATGATTCTGGGTTGGGGCTCGCCAATATCGACCTCTTCAACATAG
rJMSF015H07-          ACAAGGCCGCTGCAGATGATTCTGGGTTGGGGCTCGCCAATATCGACCTCTTCAACATAG
JMFF032N03+           ACAAGGCCGCTGCAGATGATTCTGGGTTGGGGCTCGCCAATATCGACCTCTTCAACATAG
JMFS148D08+           ACAAGGCCGCTGCAGATGATTCTGGGTTGGGGCTCGCCAATATCGACCTCTTCAACATAG
                      ____________________________________________________________
consensus             ACAAGGCCGCTGCAGATGATTCTGGGTTGGGGCTCGCCAATATCGACCTCTTCAACATAG
 
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rJMFF032N03-          AGCGAATCAGCCTCGTCGTGTTTCCAGGNCCTGAGGATTTTCCCAACCCTAATGTCCAGG
rJMSF015H07-          AGCGAATCAGCCTCGTCGTGTTTCCAGGCCCTGAGGATTTTCCCAACCCTAATGTCCAGG
JMFF032N03+           AGCGAATCAGCCTCGTCGTGTTTCCAGGCCCTGAGGATTTTCCCAACCCTAATGTCCAGG
JMFS148D08+           AGCGAATCAGCCTCGTCGTGTTTCCAGGCCCTGAGGATTTTCCCAACCCTAATGTCCAGG
                      ____________________________________________________________
consensus             AGCGAATCAGCCTCGTCGTGTTTCCAGGCCCTGAGGATTTTCCCAACCCTAATGTCCAGG
 
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rJMFF032N03-          GTGTTGGCAGCGTCCTTTATCTCCAGCATCGGCTGATTA                     
rJMSF015H07-          GTGTTGGCAGCGTCCTTTATCTCCAGCATCGGCTGATTA                     
JMFF032N03+           GTGTTGGCAGCGTCCTTTATCTCCAGCATCGGCTGATTAGCAGGCGAAGAATCTACCGAT
JMFS148D08+           GTGTTGGCAGCGTCCTTTATCTCCAGCATCGGCTGATTAGCAGGCGAAGAATCTACCGAT
                      ____________________________________________________________
consensus             GTGTTGGCAGCGTCCTTTATCTCCAGCATCGGCTGATTAGCAGGCGAAGAATCTACCGAT
 
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JMFF032N03+           CTAGAAGCAGAGGCGGCGGAGTTATCATCCTCCTCTTTGGAGGAAGCGGTAGTGGCGGCG
JMFS148D08+           CTAGAAGCAGAGGCGGCGGAGTTATCATCCTCCTCTTTGGAGGAAGCGGTAGTGGCGGCG
                      ____________________________________________________________
consensus             CTAGAAGCAGAGGCGGCGGAGTTATCATCCTCCTCTTTGGAGGAAGCGGTAGTGGCGGCG
 
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JMFF032N03+           GTGCTGTCGCTGTAGGAACACTGGGAGAATAATCCTCCCCGTGTTCTTCCAGAGAATGCA
JMFS148D08+           GTGCTGTCGCTGTAGGAACACTGGGAGAATAATCCTCCCCGTGTTCTTCCAGAGAATGCA
                      ____________________________________________________________
consensus             GTGCTGTCGCTGTAGGAACACTGGGAGAATAATCCTCCCCGTGTTCTTCCAGAGAATGCA
 
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JMFF032N03+           ACCGCCAGTTTCCTGTGACTGAAATGATTGTGAAATGAGGAGGGGAAAGCGTGGCGTGAG
JMFS148D08+           ACCGCCAGTTTCCTGTGACTGAAATGATTGTGAAATGAGGAGGGGAAAGCGTGGCGTGAG
                      ____________________________________________________________
consensus             ACCGCCAGTTTCCTGTGACTGAAATGATTGTGAAATGAGGAGGGGAAAGCGTGGCGTGAG
 
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JMFF032N03+           AACGCAGGCGGGGGAAGTGTGAGGCCCTTGTTGTTGTTTGCGTGGAAGCAGATGCGGAGA
JMFS148D08+           AACGCAGGCGGGGGAAGTGTGAGGCCCTTGTTGTTGTTTGCGTGGAAGCAGATGCGGAGA
JMSF015H07+                     GGGGAAGTGTGAGGCCCTTGTTGTTGTTTGCGTGGAAGCAGATGCGGAGA
                      ____________________________________________________________
consensus             AACGCAGGCGGGGGAAGTGTGAGGCCCTTGTTGTTGTTTGCGTGGAAGCAGATGCGGAGA
 
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JMFF032N03+           GGAGAGGGAAGAAGAGGGCGAGAGGAAGCGGAGGCAGAGAGCAGAAGGAAGGTGGTTGTC
JMFS148D08+           GGAGAGGGAAGAAGAGGGCGAGAGGAAGCGGAGGCAGAGAGCAGAAGGAAGGTGGTTGTC
JMSF015H07+           GGAGAGGGAAGAAGAGGGCGAGAGGAAGCGGAGGCAGAGAGCAGAAGGAAGGTGGTTGTC
                      ____________________________________________________________
consensus             GGAGAGGGAAGAAGAGGGCGAGAGGAAGCGGAGGCAGAGAGCAGAAGGAAGGTGGTTGTC
 
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JMFF032N03+           CCTTTCAGCACATTATTCGCTCCCACCATTGCATAATTCATCACTTCCCGTTATCCGGAC
JMFS148D08+           CCTTTCAGCACATTATTCGCTCCCACCATTGCATAATTCATCACTTCCCGTTATCCGGAC
JMSF015H07+           CCTTTCAGCACATTATTCGCTCCCACCATTGCATAATTCATCACTTCCCGTTATCCGGAC
                      ____________________________________________________________
consensus             CCTTTCAGCACATTATTCGCTCCCACCATTGCATAATTCATCACTTCCCGTTATCCGGAC
 
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JMFF032N03+           ACGAGAGAGAGAG                                               
JMFS148D08+           ACGAGAGAGAGAGAGAG                                           
JMSF015H07+           ACGAGAGAGAGAGAGAGCAGCTGCAATTCCTTCTCCTTACCTTCAATGCACTGGCTGCCC
                      ____________________________________________________________
consensus             ACGAGAGAGAGAGAGAGCAGCTGCAATTCCTTCTCCTTACCTTCAATGCACTGGCTGCCC