Contig 000679:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019B01Sequence222000679 (2)
JMSF015E09Sequence248000679 (2)799022495ref|XP_009605296.1|6e-42PREDICTED: two-component response regulator-like APRR9 isoform X1 [Nicotiana to

Alignment

This contig is upended


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JMFF019B01+                                                                   GGCG
                      ____________________________________________________________
consensus                                                                     GGCG
 
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JMFF019B01+           GCGGCGGCGGGTTTCTGCGCTGTCTGTTTCCCCATTCTTCCCCTGTTTCGCCTCGATTAT
JMSF015E09+                                                               TCGATTAT
                      ____________________________________________________________
consensus             GCGGCGGCGGGTTTCTGCGCTGTCTGTTTCCCCATTCTTCCCCTGTTTCGCCTCGATTAT
 
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JMFF019B01+           TTCCATCTGCTCTGTTTCTTGAACTCCCAACTCCGTTCCGCTGCCGCCGTTGGCCTCCGC
JMSF015E09+           TTCCATCTGCTCTGTTTCTTGAACTCCCAACTCCGTTCCGCTGCCGCCGTTGGCCTCCGC
                      ____________________________________________________________
consensus             TTCCATCTGCTCTGTTTCTTGAACTCCCAACTCCGTTCCGCTGCCGCCGTTGGCCTCCGC
 
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JMFF019B01+           TTCACCCATTCTCACTAGCAAAGTAAAACAAACCCACCGCTCTTTCCGAGATTGGGTGCT
JMSF015E09+           TTCACCCATTCTCACTAGCAAAGTAAAACAAACCCACCGCTCTTTCCGAGATTGGGTGCT
                      ____________________________________________________________
consensus             TTCACCCATTCTCACTAGCAAAGTAAAACAAACCCACCGCTCTTTCCGAGATTGGGTGCT
 
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JMFF019B01+           CCGGTAACAGAAAAAACCAACAGTAGTGTGTCGAAGGT                      
JMSF015E09+           CCGGTAACAGAAAAAACCAACAGTAGTGTGTCGAAGGTAGTGAAATTCAATGCTGTGTCG
                      ____________________________________________________________
consensus             CCGGTAACAGAAAAAACCAACAGTAGTGTGTCGAAGGTAGTGAAATTCAATGCTGTGTCG
 
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JMSF015E09+           TGTCTGGTTTCTCATTGCTTTGCCATCTAAAAATATCTCCGAAATATGAAGGCCCATTTC
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consensus             TGTCTGGTTTCTCATTGCTTTGCCATCTAAAAATATCTCCGAAATATGAAGGCCCATTTC