Contig 000678:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027K22Sequence583005841 (8)gb|KDO71717.1|9e-43hypothetical protein CISIN_1g026722mg [Citrus sinensis]670000678 (3)ref|XP_006419536.1|2e-40hypothetical protein CICLE_v10005737mg [Citrus clementina] ref|XP_006489052.1| P
JMSF015C08Sequence490000678 (3)ref|XP_010259510.1|3e-24PREDICTED: bidirectional sugar transporter SWEET17-like isoform X2 [Nelumbo nuc742005841 (8)ref|XP_006419536.1|5e-72hypothetical protein CICLE_v10005737mg [Citrus clementina] ref|XP_006489052.1| P
JMSF034N09Sequence656000678 (3)gb|KJB68710.1|4e-34hypothetical protein B456_011G1917001, partial [Gossypium raimondii]615016147ref|XP_010259510.1|5e-08PREDICTED: bidirectional sugar transporter SWEET17-like isoform X2 [Nelumbo nuc

Alignment

This contig is upended


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rJMFF027K22-                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMFF027K22-          TTATCTTCTTTATCATACAATAAAATTTTAATAAGTTGCTAAGAAACAGAAAACAAAAAA
                      ____________________________________________________________
consensus             TTATCTTCTTTATCATACAATAAAATTTTAATAAGTTGCTAAGAAACAGAAAACAAAAAA
 
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rJMFF027K22-          TAAAGAGAAAATATATAATAAAAAACCTGGAAATAAAAATAAAAATAAAATAAAATAAAG
                      ____________________________________________________________
consensus             TAAAGAGAAAATATATAATAAAAAACCTGGAAATAAAAATAAAAATAAAATAAAATAAAG
 
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rJMFF027K22-          ACAAATCTAAGCTGAAATCAAGGGCTCATTTTGCATACTGTCTTCTAATACTGCAGTGGA
                      ____________________________________________________________
consensus             ACAAATCTAAGCTGAAATCAAGGGCTCATTTTGCATACTGTCTTCTAATACTGCAGTGGA
 
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rJMFF027K22-          GGATTTTGCTGTTTTTGGCTTGCTGTAAATGGCATACAATATTAGCTGTACTGCCCCAAA
                      ____________________________________________________________
consensus             GGATTTTGCTGTTTTTGGCTTGCTGTAAATGGCATACAATATTAGCTGTACTGCCCCAAA
 
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rJMFF027K22-          TATGAATCCTGTCCCATTTGGTACCCCAAGAAACCAGTCACGAACTATGAAAGCATACAC
                      ____________________________________________________________
consensus             TATGAATCCTGTCCCATTTGGTACCCCAAGAAACCAGTCACGAACTATGAAAGCATACAC
 
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rJMFF027K22-          AGCCCAAACGCCACCGTTTAAGCAGATGAAAAGTGAGAGGTAGAAGGGCATGAACTCCAC
                      ____________________________________________________________
consensus             AGCCCAAACGCCACCGTTTAAGCAGATGAAAAGTGAGAGGTAGAAGGGCATGAACTCCAC
 
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rJMFF027K22-          ACTCTTGGTCCTCAATACCGTCCCATGATGATATTCAATACAATGCACAGATAACCTATA
JMSF034N09+               CAGCCAAGGGAGAAGCATACATGATGATATTCAATACAATGCACAGATAACCTATA
                      ____________________________________________________________
consensus             ACTCTTGGTCCTGGATACGGTTCCATGATGATATTCAATACAATGCACAGATAACCTATA
 
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rJMFF027K22-          GCATCGATCAAAGCTTCTCCTTCAAGTGTGAACTTGGTCACCAAAATCACAACCGCCAGA
JMSF034N09+           GCATCGATCAAAGCTTCTCCTTCAAGTGTGAACTTGGTCACCAAAATCACAACCGCCAGA
                      ____________________________________________________________
consensus             GCATCGATCAAAGCTTCTCCTTCAAGTGTGAACTTGGTCACCAAAATCACAACCGCCAGA
 
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rJMFF027K22-          AGAGCAATGTTCAGAGCAGCGGCCAAAGCCGCCGTCTTCTTCTTGGTTTTAGGAGGAGCG
JMSF034N09+           AGAGCAATGTTCAGAGCAGCGGCCAAAGCCGCCGTCTTCTTCTTGGTTTTAGGAGGAGCG
JMSF015C08+                                                             AGGAGGAGCG
                      ____________________________________________________________
consensus             AGAGCAATGTTCAGAGCAGCGGCCAAAGCCGCCGTCTTCTTCTTGGTTTTAGGAGGAGCG
 
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rJMFF027K22-          AAGACGATGAAGATGAGGACGTATACGGTCTCGGCCAGAACGCCGAAAGCATTGACAGTG
JMSF034N09+           AAGACGATGAAGATGAGGACGTATACGGTCTCGGCCAGAACGCCGAAAGCATTGACAGTG
JMSF015C08+           AAGACGATGAAGATGAGGACGTATACGGTCTCGGCCAGAACGCCGAAAGCATTGACAGTG
                      ____________________________________________________________
consensus             AAGACGATGAAGATGAGGACGTATACGGTCTCGGCCAGAACGCCGAAAGCATTGACAGTG
 
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rJMFF027K22-          AAAACCAGAAAGGCACCGGGTTTTGTAAGGCCATAGTAGCACCAAAGGGACGAACTCAGC
JMSF034N09+           AAAACCAGAAAGGCACCGGGTTTTGTAAGGCCATAGTAGCACCAAAGGGACGAACTCAGC
JMSF015C08+           AAAACCAGAAAGGCACCGGGTTTTGTAAGGCCATAGTAGCACCAAAGGGACGAACTCAGC
                      ____________________________________________________________
consensus             AAAACCAGAAAGGCACCGGGTTTTGTAAGGCCATAGTAGCACCAAAGGGACGAACTCAGC
 
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rJMFF027K22-          AACGTAGAG                                                   
JMSF034N09+           AACGTAGAGATGTAAGGAATGCTATCGAAGTCTTCTGTGGATCTGTTCTTCACTATCCTA
JMSF015C08+           AACGTAGAGATGTAAGGAATGCTATCGAAGTCTTCTGTGGATCTGTTCTTCACTATCCTA
                      ____________________________________________________________
consensus             AACGTAGAGATGTAAGGAATGCTATCGAAGTCTTCTGTGGATCTGTTCTTCACTATCCTA
 
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JMSF034N09+           ATGAATACATCCCTGCAATAATATAATAATATATATGTCAACACTACAGTGTGTAGTATA
JMSF015C08+           ATGAATACATCCCTGCAATAATATAATAATATATATGTCAACACTACAGTGTGTAGTATA
                      ____________________________________________________________
consensus             ATGAATACATCCCTGCAATAATATAATAATATATATGTCAACACTACAGTGTGTAGTATA
 
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JMSF034N09+           TAGATCACATGATTTGAAGTATACTATACATACATCACATATTCAACTCTACCGTACCTG
JMSF015C08+           TAGATCACATGATTTGAAGTATACTATACATACATCACATATTCAACTCTACCGTACCTG
                      ____________________________________________________________
consensus             TAGATCACATGATTTGAAGTATACTATACATACATCACATATTCAACTCTACCGTACCTG
 
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JMSF034N09+           GTTTGACCTCTACAATATTAACGATGAGTGGACTTAGAATAGAAATTAACTTACGCGGGG
JMSF015C08+           GTTTGACCTCTACAATATTAACGATGAGTGGACTTAGAATAGAAATTAACTTACGCGGGG
                      ____________________________________________________________
consensus             GTTTGACCTCTACAATATTAACGATGAGTGGACTTAGAATAGAAATTAACTTACGCGGGG
 
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JMSF034N09+           GAAAGGAAGATGAAAATGGAGAGGATATTTCCTACAACTCCGACGTAGAAACTCAAGTCT
JMSF015C08+           GAAAGGAAGATGAAAATGGAGAGGATATTTCCTACAACTCCGACGTAGAAACTCAAGTCT
                      ____________________________________________________________
consensus             GAAAGGAAGATGAAAATGGAGAGGATATTTCCTACAACTCCGACGTAGAAACTCAAGTCT
 
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JMSF034N09+           AGATCCATTGCTGTATTAGAAAAAACAGAAAGTGAAGCAGCGGAGGGAAGTAGCCACTTC
JMSF015C08+           AGATCCATTGCTGTATTAGAAAAAACAGAAAGTGAAGCAGCGGAGGGAAGTAGCCACTTC
                      ____________________________________________________________
consensus             AGATCCATTGCTGTATTAGAAAAAACAGAAAGTGAAGCAGCGGAGGGAAGTAGCCACTTC