Contig 000676:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024O13Sequence522000676 (4)ref|XP_009800757.1|3e-14PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X1 [Nicotiana syl771012748 (4)ref|XP_009625987.1|1e-62PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Nicotiana tomentosiformi
JMSF014I16Sequence497000676 (4)ref|XP_009800757.1|1e-08PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X1 [Nicotiana syl793012748 (4)ref|XP_009625987.1|9e-65PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Nicotiana tomentosiformi
JMSF046D16Sequence786000676 (4)ref|XP_009800759.1|1e-57PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X2 [Nicotiana syl800012748 (4)ref|XP_009798332.1|6e-29PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Nicotian
JMSF047G05Sequence703000676 (4)ref|XP_009800757.1|1e-39PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 isoform X1 [Nicotiana syl755012748 (4)ref|XP_009798332.1|3e-31PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Nicotian

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046D16+ ACAATC
                      ____________________________________________________________
consensus ACAATC
 
. : . : . : . : . : . :
JMSF046D16+ ATAAAAAATTTCTGGGAAAAAGCAATCCCCAGCTTCATCAATCCATGCAATCGATTGCTG
                      ____________________________________________________________
consensus ATAAAAAATTTCTGGGAAAAAGCAATCCCCAGCTTCATCAATCCATGCAATCGATTGCTG
 
. : . : . : . : . : . :
JMSF046D16+ GAAACCCCTCTTCAAGTCCACCAGCACCATGGAGACAAAGTCAAGCACACAAATGTTACC
JMSF047G05+ CCACCAGCACCANGGAGACAAAGTCAAGCACACAAATGTTACC
                      ____________________________________________________________
consensus GAAACCCCTCTTCAAGTCCACCAGCACCATGGAGACAAAGTCAAGCACACAAATGTTACC
 
. : . : . : . : . : . :
JMSF046D16+ ATTAAAGCATACCTCTATTACAGACTTCTCCATCTGCAAATTTTGCTTAACCACTGCAAG
JMSF047G05+ ATTAAAGCATACCTCTATTACAGACTTCTCCATCTGCAAATTTTGCTTAACCACTGCAAG
                      ____________________________________________________________
consensus ATTAAAGCATACCTCTATTACAGACTTCTCCATCTGCAAATTTTGCTTAACCACTGCAAG
 
. : . : . : . : . : . :
JMSF046D16+ TATGTTTTGAGGAAAGTCAGTCCATTTACCCTTTTTATAATACATCAAGCGGATTGGAGG
JMSF047G05+ TATGTTTTGAGGAAAGTCAGTCCATTTACCCTTTTTATAATACATCAAGCGGATTGGAGG
                      ____________________________________________________________
consensus TATGTTTTGAGGAAAGTCAGTCCATTTACCCTTTTTATAATACATCAAGCGGATTGGAGG
 
. : . : . : . : . : . :
JMSF046D16+ TCCACTTCTTCTAAAATTCAGATAGTGTTGCACTGGAGATTTTCTGAGGTGAAACCCACC
JMFF024O13+ AAATTCAGATAGTGTTGCACTGGAGATTTTCTGAGGTGAAACCCACC
JMSF047G05+ TCCACTTCTTCTAAAATTCAGATAGTGTTGCACTGGAGATTTTCTGAGGTGAAACCCACC
JMSF014I16+ CC
                      ____________________________________________________________
consensus TCCACTTCTTCTAAAATTCAGATAGTGTTGCACTGGAGATTTTCTGAGGTGAAACCCACC
 
. : . : . : . : . : . :
JMSF046D16+ ACAGCTAGACTTGCTTTTGACTTCATCCAATTTTCTTCGCTTGCCAAACTTTTCTGTGGT
JMFF024O13+ ACAGCTAGACTTGCTTTTGACTTCATCCAATTTTCTTCGCTTGCCAAACTTTTCTGTGGT
JMSF047G05+ ACAGCTAGACTTGCTTTTGACTTCATCCAATTTTCTTCGCTTGCCAAACTTTTCTGTGGT
JMSF014I16+ ACAGCTAGACTTGCTTTTGACTTCATCCAATTTTCTTCGCTTGCCAAACTTTTCTGTGGT
                      ____________________________________________________________
consensus ACAGCTAGACTTGCTTTTGACTTCATCCAATTTTCTTCGCTTGCCAAACTTTTCTGTGGT
 
. : . : . : . : . : . :
JMSF046D16+ AGAATTATCAGGGCAAGATGTTGGTAGTAACGAGTGGATAGTTCCATTATTATATGTCTC
JMFF024O13+ AGAATTATCAGGGCAAGATGTTGGTAGTAACGAGTGGATAGTTCCATTATTATATGTCTC
JMSF047G05+ AGAATTATCAGGGCAAGATGTTGGTAGTAACGAGTGGATAGTTCCATTATTATATGTCTC
JMSF014I16+ AGAATTATCAGGGCAAGATGTTGGTAGTAACGAGTGGATAGTTCCATTATTATATGTCTC
                      ____________________________________________________________
consensus AGAATTATCAGGGCAAGATGTTGGTAGTAACGAGTGGATAGTTCCATTATTATATGTCTC
 
. : . : . : . : . : . :
JMSF046D16+ AGATTGAGTCTCAAGTTTTCTTTTCAAATTGACAACAATATGCTTACTGTTATCCAATAC
JMFF024O13+ AGATTGAGTCTCAAGTTTTCTTTTCAAATTGACAACAATATGCTTACTGTTATCCAATAC
JMSF047G05+ AGATTGAGTCTCAAGTTTTCTTTTCAAATTGACAACAATATGCTTACTGTTATCCAATAC
JMSF014I16+ AGATTGAGTCTCAAGTTTTCTTTTCAAATTGACAACAATATGCTTACTGTTATCCAATAC
                      ____________________________________________________________
consensus AGATTGAGTCTCAAGTTTTCTTTTCAAATTGACAACAATATGCTTACTGTTATCCAATAC
 
. : . : . : . : . : . :
JMSF046D16+ CCTTCCGAATTTTGTTTCCATTTCTTCCTAGAGGATGAATCCCTGTCAACAACTTTAAAT
JMFF024O13+ CCTTCCGAATTTTGTTTCCATTTCTTCCTAGAGGATGAATCCCTGTCAACAACTTTAAAT
JMSF047G05+ CCTTCCGAATTTTGTTTCCATTTCTTCCTAGAGGATGAATCCCTGTCAACAACTTTAAAT
JMSF014I16+ CCTTCCGAATTTTGTTTCCATTTCTTCCTAGAGGATGAATCCCTGTCAACAACTTTAAAT
                      ____________________________________________________________
consensus CCTTCCGAATTTTGTTTCCATTTCTTCCTAGAGGATGAATCCCTGTCAACAACTTTAAAT
 
. : . : . : . : . : . :
JMSF046D16+ CCAAGATTTCGAAGACAACTTTATACAGTTCAGTCACGGTTCTGTCTCAGAGTGACCGTT
JMFF024O13+ CCAAGATTTCGAAGACAACTTTATACAGTTCAGTCACGGTTCTGTCTCAGAGTGACCGTT
JMSF047G05+ CCAAGATTTCGAAGACAACTTTATACAGTTCAGTCACGGTTCTGTCTCAGAGTGACCGTT
JMSF014I16+ CCAAGATTTCGAAGACAACTTTATACAGTTCAGTCACGGTTCTGTCTCAGAGTGACCGTT
                      ____________________________________________________________
consensus CCAAGATTTCGAAGACAACTTTATACAGTTCAGTCACGGTTCTGTCTCAGAGTGACCGTT
 
. : . : . : . : . : . :
JMSF046D16+ CCATTGTTAAATCCTTGATCATTGTGGCTAAGTTTGATGCTATGGACCATGGATCTACCT
JMFF024O13+ CCATTGTTAAATCCTTGATCATTGTGGCTAAGTTTGATGCTATGGACCATGGATCTACCT
JMSF047G05+ CCATTGTTAAATCCTTGATCATTGTGGCTAAGTTTGATGCTATGGACCATGGATCTACCT
JMSF014I16+ CCATTGTTAAATCCTTGATCATTGTGGCTAAGTTTGATGCTATGGACCATGGATCTACCT
                      ____________________________________________________________
consensus CCATTGTTAAATCCTTGATCATTGTGGCTAAGTTTGATGCTATGGACCATGGATCTACCT
 
. : . : . : . : . : . :
JMSF046D16+ GAGTTGCAGAGATTGAAGAGCCGACGAATTAGTTTTCCTCCTACTCCGGCTGCTTTTTCC
JMFF024O13+ GAGTTGCAGAGATTGAAGAGCCGACGAATTAGTTTTCCTCCTACTCCGGCTGCTTTTTCC
JMSF047G05+ GAGTTGCAGAGATTGAAGAGCCGACGAATTAGTTTTCCTCCTACTCCGGCTGCTTTTTCC
JMSF014I16+ GAGTTGCAGAGATTGAAGAGCCGACGAATTAGTTTTCCTCCTACTCCGGCTGCTTTTTCC
                      ____________________________________________________________
consensus GAGTTGCAGAGATTGAAGAGCCGACGAATTAGTTTTCCTCCTACTCCGGCTGCTTTTTCC
 
. : . : . : . : . : . :
JMSF046D16+ GTCAACGTCGGTGACAAACCCTAAAAGCCTCCGCCCAAAGAAACCTTAGCGGGAC
JMFF024O13+ GTCAACGTCGGTGACAAACCCTAAAAGCCTCCGCCCAAAGAAACCTTAGCAGGAC
JMSF047G05+ GTCAACGTCGGTGACAAACCCTAAAAGCCTCCGCCCAAAGAAACCTTAGCGGGAC
JMSF014I16+ GTCAACGTCGGTGACAAACCCTAAAAGCCTCCGCCCAAAGAAACCTTAGCGGGACAGATC
                      ____________________________________________________________
consensus GTCAACGTCGGTGACAAACCCTAAAAGCCTCCGCCCAAAGAAACCTTAGCGGGACAGATC