Contig 000675:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS127E05Sequence570000675 (2)ref|XP_009786217.1|101PREDICTED: uncharacterized protein LOC104234359 [Nicotiana sylvestris]
JMSF014I04Sequence252000675 (2)ref|XP_009607466.1|1e-08PREDICTED: uncharacterized protein LOC104101681 isoform X1 [Nicotiana tomentosi801014990ref|XP_009625292.1|6e-40PREDICTED: putative pumilio homolog 16 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS127E05+                  AGGACTTCGTCAATGATACCATTAGCGTGGCAGTCAATCCGATCCACATACAT
                      ____________________________________________________________
consensus                    AGGACTTCGTCAATGATACCATTAGCGTGGCAGTCAATCCGATCCACATACAT
 
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JMFS127E05+           CTGCCATTTCGATCTTCTCCCTCCATCCATGGAGAACTACTCGTACACCTCGTTCCGGTG
                      ____________________________________________________________
consensus             CTGCCATTTCGATCTTCTCCCTCCATCCATGGAGAACTACTCGTACACCTCGTTCCGGTG
 
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JMFS127E05+           AAATCGAGTACGATCGACTCTATAGGGCTTGGCCGAATTGAAGCCGGCTAGGCTGAGGCT
                      ____________________________________________________________
consensus             AAATCGAGTACGATCGACTCTATAGGGCTTGGCCGAATTGAAGCCGGCTAGGCTGAGGCT
 
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JMFS127E05+           GTTCATCTTCCCGGCTACTCCTCCTACGGTGATGACGCAGAGCCGGATCGGAGTTTTGGC
                      ____________________________________________________________
consensus             GTTCATCTTCCCGGCTACTCCTCCTACGGTGATGACGCAGAGCCGGATCGGAGTTTTGGC
 
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JMFS127E05+           TCTGATGACGTGAAATCTGAGAAGCATAGGTTTGTGGAAGCGTTGAATTCCGGCCCTGTT
                      ____________________________________________________________
consensus             TCTGATGACGTGAAATCTGAGAAGCATAGGTTTGTGGAAGCGTTGAATTCCGGCCCTGTT
 
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JMFS127E05+           CAGACAAATCATTCGCCTTCCGCAGCCAGGGAACGCGGATTTTCTGATCTGTTTGGATTA
JMSF014I04+                                                           CTGTTTGGATTA
                      ____________________________________________________________
consensus             CAGACAAATCATTCGCCTTCCGCAGCCAGGGAACGCGGATTTTCTGATCTGTTTGGATTA
 
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JMFS127E05+           TATAAAGGAGTGCCGGCGCCGCCTCAAGTGAAGTTGAGGGATCCGGGTATGGAGACGACG
JMSF014I04+           TATAAAGGAGTGCNGGCGCCGCCTCAAGTGAAGTTGAGGGATCCGGGTATGGAGACGACG
                      ____________________________________________________________
consensus             TATAAAGGAGTGCCGGCGCCGCCTCAAGTGAAGTTGAGGGATCCGGGTATGGAGACGACG
 
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JMFS127E05+           GTAGTTAAGGAACCGGAGATTCCGGCACCGTGTTTGGATGATAGGATGATCGGATCCAAT
JMSF014I04+           GTAGTTAAGGAACCGGAGATTCCGGCACCGTGTTTGGATGATAGGATGATCGGATCCAAT
                      ____________________________________________________________
consensus             GTAGTTAAGGAACCGGAGATTCCGGCACCGTGTTTGGATGATAGGATGATCGGATCCAAT
 
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JMFS127E05+           CCAATCCAATCCAGAAACATATCCAGGATCTGCATCTGGAAGAGCAACAGAATGTATATC
JMSF014I04+           CCAATCCAATCCAGAAACATATCCAGGATCTGCATCTGGAAGAGCAACAGAATGTATATC
                      ____________________________________________________________
consensus             CCAATCCAATCCAGAAACATATCCAGGATCTGCATCTGGAAGAGCAACAGAATGTATATC
 
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JMFS127E05+           GCCGGAGCAATACAACAGAATCATACATTTGCCTACA                       
JMSF014I04+           GCCGGAGCAATACAACAGAATCATACATTTGCCTACACGTTGGCAGGCATCTTGTGTGCC
                      ____________________________________________________________
consensus             GCCGGAGCAATACAACAGAATCATACATTTGCCTACACGTTGGCAGGCATCTTGTGTGCC