Contig 000674:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014H15Sequence464000674 (4)emb|CAN75637.1|4e-05hypothetical protein VITISV_043619 [Vitis vinifera]413000674 (4)emb|CAN75637.1|3e-05hypothetical protein VITISV_043619 [Vitis vinifera]
JMSF024P08Sequence464000674 (4)emb|CAN75637.1|4e-05hypothetical protein VITISV_043619 [Vitis vinifera]413000674 (4)emb|CAN75637.1|3e-05hypothetical protein VITISV_043619 [Vitis vinifera]

Alignment

This contig is upended


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JMSF024P08-                           GAAGACTAAATTCTCATAACCAAGACATGAAAACACCATTGCTT
rJMSF024P08+                          GAAGACTAAATTCTCATAACCAAGACATGAAAACACCATTGCTT
rJMSF014H15+                          GAAGACTAAATTCTCATAACCAAGACATGAAAACACCATTGCTT
JMSF014H15-                           GAAGACTAAATTCTCATAACCAAGACATGAAAACACCATTGCTT
                      ____________________________________________________________
consensus                             GAAGACTAAATTCTCATAACCAAGACATGAAAACACCATTGCTT
 
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JMSF024P08-           TGTTGCCTATGCTTTATTGTAAGCTTGAGTTTCTTGGCATACTCTACATGCAGTGAATTC
rJMSF024P08+          TGTTGCCTATGCTTTATTGTAAGCTTGAGTTTCTTGGCATACTCTACATGCAGTGAATTC
rJMSF014H15+          TGTTGCCTATGCTTTATTGTAAGCTTGAGTTTCTTGGCATACTCTACATGCAGTGAATTC
JMSF014H15-           TGTTGCCTATGCTTTATTGTAAGCTTGAGTTTCTTGGCATACTCTACATGCAGTGAATTC
                      ____________________________________________________________
consensus             TGTTGCCTATGCTTTATTGTAAGCTTGAGTTTCTTGGCATACTCTACATGCAGTGAATTC
 
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JMSF024P08-           TCCTTCAACCTAAAACATAGAAATCTTGAGATTTTGCAGGAAGAGAAGCAAACAAGAAAT
rJMSF024P08+          TCCTTCAACCTAAAACATAGAAATCTTGAGATTTTGCAGGAAGAGAAGCAAACAAGAAAT
rJMSF014H15+          TCCTTCAACCTAAAACATAGAAATCTTGAGATTTTGCAGGAAGAGAAGCAAACAAGAAAT
JMSF014H15-           TCCTTCAACCTAAAACATAGAAATCTTGAGATTTTGCAGGAAGAGAAGCAAACAAGAAAT
                      ____________________________________________________________
consensus             TCCTTCAACCTAAAACATAGAAATCTTGAGATTTTGCAGGAAGAGAAGCAAACAAGAAAT
 
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JMSF024P08-           ACAAGTTGGAGAATCGAAGGATTACAAGGTTCCACGGACTTTAATAATAAAAATAAGGTA
rJMSF024P08+          ACAAGTTGGAGAATCGAAGGATTACAAGGTTCCACGGACTTTAATAATAAAAATAAGGTA
rJMSF014H15+          ACAAGTTGGAGAATCGAAGGATTACAAGGTTCCACGGACTTTAATAATAAAAATAAGGTA
JMSF014H15-           ACAAGTTGGAGAATCGAAGGATTACAAGGTTCCACGGACTTTAATAATAAAAATAAGGTA
                      ____________________________________________________________
consensus             ACAAGTTGGAGAATCGAAGGATTACAAGGTTCCACGGACTTTAATAATAAAAATAAGGTA
 
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JMSF024P08-           GAAACAGTGGATCATGGCAAAAGAGGAGCATACGGCGGATCTGACCTTCTCCGGAAGCCT
rJMSF024P08+          GAAACAGTGGATCATGGCAAAAGAGGAGCATACGGCGGATCTGACCTTCTCCGGAAGCCT
rJMSF014H15+          GAAACAGTGGATCATGGCAAAAGAGGAGCATACGGCGGATCTGACCTTCTCCGGAAGCCT
JMSF014H15-           GAAACAGTGGATCATGGCAAAAGAGGAGCATACGGCGGATCTGACCTTCTCCGGAAGCCT
                      ____________________________________________________________
consensus             GAAACAGTGGATCATGGCAAAAGAGGAGCATACGGCGGATCTGACCTTCTCCGGAAGCCT
 
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JMSF024P08-           GCTGATAAATCCGACGGCGGACGTAATTGCACATCATTTCCAAATCTCTTTCACATATTA
rJMSF024P08+          GCTGATAAATCCGACGGCGGACGTAATTGCACATCATTTCCAAATCTCTTTCACATATTA
rJMSF014H15+          GCTGATAAATCCGACGGCGGACGTAATTGCACATCATTTCCAAATCTCTTTCACATATTA
JMSF014H15-           GCTGATAAATCCGACGGCGGACGTAATTGCACATCATTTCCAAATCTCTTTCACATATTA
                      ____________________________________________________________
consensus             GCTGATAAATCCGACGGCGGACGTAATTGCACATCATTTCCAAATCTCTTTCACATATTA
 
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JMSF024P08-           GCAAGCATTACCATAGCATTACTTGCTTTATACTTCTGGTATATTGAGTGACAGAAGGAT
rJMSF024P08+          GCAAGCATTACCATAGCATTACTTGCTTTATACTTCTGGTATATTGAGTGACAGAAGGAT
rJMSF014H15+          GCAAGCATTACCATAGCATTACTTGCTTTATACTTCTGGTATATTGAGTGACAGAAGGAT
JMSF014H15-           GCAAGCATTACCATAGCATTACTTGCTTTATACTTCTGGTATATTGAGTGACAGAAGGAT
                      ____________________________________________________________
consensus             GCAAGCATTACCATAGCATTACTTGCTTTATACTTCTGGTATATTGAGTGACAGAAGGAT
 
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JMSF024P08-           ACACGAATTGTACTATCTTTATTCGGAAGAGTAATGGGTTTCTTTTGTTGAAAAAAAAAA
rJMSF024P08+          ACACGAATT                                                   
rJMSF014H15+          ACACGAATT                                                   
JMSF014H15-           ACACGAATTGTACTATCTTTATTCGGAAGAGTAATGGGTTTCTTTTGTTGAAAAAAAAAA
                      ____________________________________________________________
consensus             ACACGAATTGTACTATCTTTATTCGGAAGAGTAATGGGTTTCTTTTGTTGAAAAAAAAAA