Contig 000672:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+                            AAGAACACCGAAAAGTGCTCCAGCAAGTAATGACATAAAAATG
                      ____________________________________________________________
consensus                              AAGAACACCGAAAAGTGCTCCAGCAAGTAATGACATAAAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           GTCCCGGGAATCATGAATGTCTGCATAAATATGTATGTTGAGCAGTAACCCAAAATGAAT
                      ____________________________________________________________
consensus             GTCCCGGGAATCATGAATGTCTGCATAAATATGTATGTTGAGCAGTAACCCAAAATGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           CTCGTTGGGTACATATCGGCATACATAGCTAGGTGATCCTTGAGCATCCGAAGATCAGAA
JMSF024D16+                                                            GAAGATCAGAA
                      ____________________________________________________________
consensus             CTCGTTGGGTACATATCGGCATACATAGCTAGGTGATCCTTGAGCATCCGAAGATCAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           ATATTACGAGGAAGCTTGAGTTTCCCATAATCTGCAGCAGGCATTGTCAAGTAGATGCAG
JMSF024D16+           ATATTACGAGGAAGCTTGAGTTTCCCATAATCTGCAGCAGGCATTGTCAAGTAGATGCAG
                      ____________________________________________________________
consensus             ATATTACGAGGAAGCTTGAGTTTCCCATAATCTGCAGCAGGCATTGTCAAGTAGATGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           AACAAGCCTGTCAAGCACACCATGAACACCACAAGAGCCGCGGCGAACTCCCAACGGCTG
JMSF024D16+           AACAAGCCTGTCAAGCACACCATGAACACCACAAGAGCCGCGGCGAACTCCCAACGGCTG
                      ____________________________________________________________
consensus             AACAAGCCTGTCAAGCACACCATGAACACCACAAGAGCCGCGGCGAACTCCCAACGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           AGCAGGAACTTGCCCTCTTTGTAACGTTTGGCTGTCGGCGAGTCCGAGGAATAGGAGTCG
JMSF024D16+           AGCAGGAACTTGCCCTCTTTGTAACGTTTGGCTGTCGGCGAGTCCGAGGAATAGGAGTCG
                      ____________________________________________________________
consensus             AGCAGGAACTTGCCCTCTTTGTAACGTTTGGCTGTCGGCGAGTCCGAGGAATAGGAGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           GACAAATCGAGAATCTTCTCCTCATCTCTGGCCAAGCGCGACGTGTCCACCACCAAACCC
JMSF024D16+           GACAAATCGAGAATCTTCTCCTCATCTCTGGCCAAGCGCGACGTGTCCACCACCAAACCC
                      ____________________________________________________________
consensus             GACAAATCGAGAATCTTCTCCTCATCTCTGGCCAAGCGCGACGTGTCCACCACCAAACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           CTGGGCGCCGCCATTGACGACCACAACGCAGATGGATGGCGATCTTTATGGTGATGACGA
JMSF024D16+           CTGGGCGCCGCCATTGACGACCACAACGCAGATGGATGGCGATCTTTATGGTGATGACGA
                      ____________________________________________________________
consensus             CTGGGCGCCGCCATTGACGACCACAACGCAGATGGATGGCGATCTTTATGGTGATGACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           TATCAATAACACCCTATGCTTCACTCATTTGGGCAGGGCCTCGTCTAGGGCTTGTTGATC
JMSF024D16+           TATCAATAACACCCTATGCTTCACTCATTTGGGCAGGGCCTCGTCTAGGGCTTGTTGATC
                      ____________________________________________________________
consensus             TATCAATAACACCCTATGCTTCACTCATTTGGGCAGGGCCTCGTCTAGGGCTTGTTGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           CAAAAGGAAATGAAGAAATCTAGGGTTTGTGATTTCGGATTCAACGAATCAGTAGAAATT
JMSF024D16+           CAAAAGGAAATGAAGAAATCTAGGGTTTGTGATTTCGGATTCAACGAATCAGTAGAAATT
JMSF014C24+               AGGAAATGAAGAAATCTAGGGTTTGTGATTTCGGATTCAACGAATCAGTAGAAATT
                      ____________________________________________________________
consensus             CAAAAGGAAATGAAGAAATCTAGGGTTTGTGATTTCGGATTCAACGAATCAGTAGAAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           TTCTTTTAAAAAATTTAAAATTCCCAAAGAGAACGAAAAAGATTGAATTTTTAGATGAAA
JMSF024D16+           TTCTTTTAAAAAATTTAAAATTCCCAAAGAGAACGAAAAAGATTGAATTTTTAGATGAAA
JMSF014C24+           TTCTTTTAAAAAATTTAAAATTCCCAAAGAGAACGAAAAAGATTGAATTTTTAGATGAAA
                      ____________________________________________________________
consensus             TTCTTTTAAAAAATTTAAAATTCCCAAAGAGAACGAAAAAGATTGAATTTTTAGATGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           GACAAGAAAACGGAAGCTGAAATCGGAGGCAAACAGGAAAAAAACAAAGGTTGAAGTATT
JMSF024D16+           GACAAGAAAACGGAAGCTGAAATCGGAGGCAAACAGGAAAAAAACAAAGGTTGAAGTATT
JMSF014C24+           GACAAGAAAACGGAAGCTGAAATCGGAGGCAAACAGGAAAAAAACAAAGGTTGAAGTATT
                      ____________________________________________________________
consensus             GACAAGAAAACGGAAGCTGAAATCGGAGGCAAACAGGAAAAAAACAAAGGTTGAAGTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF041G19+           AGGAATTGGCAATTTGGGATATTTTCTTGGAATCCATTGGGTTGTTTGAATTTTTGT   
JMSF024D16+           AGGAATTGGCAATTTGGGATATTTTCTTGGAATCCATTGGGTTGTTTGAATTTTTGT   
JMSF014C24+           AGGAATTGGCAATTTGGGATATTTTCTTGGAATCCATTGGGTTGTTTGAATTTTTGTTCC
                      ____________________________________________________________
consensus             AGGAATTGGCAATTTGGGATATTTTCTTGGAATCCATTGGGTTGTTTGAATTTTTGTTCC