Contig 000660:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS153B02Sequence621000660 (4)gb|KJB55756.1|6e-73hypothetical protein B456_009G092400 [Gossypium raimondii]
JMSF012J14Sequence534000660 (4)ref|XP_002525631.1|1e-43villin 1-4, putative [Ricinus communis] gb|EEF36749.1| villin 1-4, putative [Ric792008236 (5)ref|XP_010650910.1|3e-61PREDICTED: villin-1 isoform X1 [Vitis vinifera] emb|CBI15965.3| unnamed protein
JMSF028M04Sequence610000660 (4)ref|XP_002525631.1|6e-57villin 1-4, putative [Ricinus communis] gb|EEF36749.1| villin 1-4, putative [Ric701008236 (5)ref|XP_010650910.1|1e-55PREDICTED: villin-1 isoform X1 [Vitis vinifera] emb|CBI15965.3| unnamed protein
JMSF048E23Sequence681000660 (4)ref|XP_007016120.1|9e-66Villin-like 1 [Theobroma cacao] gb|EOY33739.1| Villin-like 1 [Theobroma cacao]740008236 (5)ref|XP_010650910.1|8e-60PREDICTED: villin-1 isoform X1 [Vitis vinifera] emb|CBI15965.3| unnamed protein

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS153B02+ GTTCAAGGATGCCCGAGTAAAAGGAACTTCTTTAACATGAACAACGTGATC
JMSF048E23+ TTTAACATGAACAACGTGATC
                      ____________________________________________________________
consensus GTTCAAGGATGCCCGAGTAAAAGGAACTTCTTTAACATGAACAACGTGATC
 
. : . : . : . : . : . :
JMFS153B02+ TCCCTTGCACGTTAACATGCTGATCGGGTATTCCTTGCTCTTTTCATTTGCTTGGCCTCT
JMSF028M04+ CTTGGCCTCT
JMSF048E23+ TCCCTTGCACGTTAACATGCTGATCGGGTATTCCTTGCTCTTTTCATTTGCTTGGCCTCT
                      ____________________________________________________________
consensus TCCCTTGCACGTTAACATGCTGATCGGGTATTCCTTGCTCTTTTCATTTGCTTGGCCTCT
 
. : . : . : . : . : . :
JMFS153B02+ CGAAAACGTGCCTTCAATCGGGATAATACAAGGCTTAAAATACGACAAGAACTTCTCGGT
JMSF028M04+ CGAAAACGTGCCTTCAATCGGGATAATACAAGGCTTAAAATACGACAAGAACTTCTCGGT
JMSF048E23+ CGAAAACGTGCCTTCAATCGGGATAATACAAGGCTTAAAATACGACAAGAACTTCTCGGT
                      ____________________________________________________________
consensus CGAAAACGTGCCTTCAATCGGGATAATACAAGGCTTAAAATACGACAAGAACTTCTCGGT
 
. : . : . : . : . : . :
JMFS153B02+ TTCTTCCCCTTGAACTTCTCGATATTGTACAGTGTAGGACCCGAGAGCTGCATCGAGCTC
JMSF028M04+ TTCTTCCCCTTGAACTTCTCGATATTGTACAGTGTAGGACCCGAGAGCTGCATCGAGCTC
JMSF048E23+ TTCTTCCCCTTGAACTTCTCGATATTGTACAGTGTAGGACCCGAGAGCTGCATCGAGCTC
JMSF012J14+ CCCTTGAACTTCTCGATATTGTACAGTGTAGGACCCGAGAGCTGCATCGAGCTC
                      ____________________________________________________________
consensus TTCTTCCCCTTGAACTTCTCGATATTGTACAGTGTAGGACCCGAGAGCTGCATCGAGCTC
 
. : . : . : . : . : . :
JMFS153B02+ AAGAGCTTTGTCTGACACCAACTTCGAATCTACCTGTTTAGCATTAGTTCCGATCCAATA
JMSF028M04+ AAGAGCTTTGTCTGACACCAACTTCGAATCTACCTGTTTAGCATTAGTTCCGATCCAATA
JMSF048E23+ AAGAGCTTTGTCTGACACCAACTTCGAATCTACCTGTTTAGCATTAGTTCCGATCCAATA
JMSF012J14+ AAGAGCTTTGTCTGACACCAACTTCGAATCTACCTGTTTAGCATTAGTTCCGATCCAATA
                      ____________________________________________________________
consensus AAGAGCTTTGTCTGACACCAACTTCGAATCTACCTGTTTAGCATTAGTTCCGATCCAATA
 
. : . : . : . : . : . :
JMFS153B02+ GTGTATATCGTGCTGACAGATTCCAGTTTTAAGCAGCACCGTATGTAAAACTAGGTAAGT
JMSF028M04+ GTGTATATCGTGCTGACAGATTCCAGTTTTAAGCAGCACCGTATGTAAAACTAGGTAAGT
JMSF048E23+ GTGTATATCGTGCTGACAGATTCCAGTTTTAAGCAGCACCGTATGTAAAACTAGGTAAGT
JMSF012J14+ GTGTATATCGTGCTGACAGATTCCAGTTTTAAGCAGCACCGTATGTAAAACTAGGTAAGT
                      ____________________________________________________________
consensus GTGTATATCGTGCTGACAGATTCCAGTTTTAAGCAGCACCGTATGTAAAACTAGGTAAGT
 
. : . : . : . : . : . :
JMFS153B02+ GCTTCCAGAATAGAATTTCCCATGGAATGATTTCGGGACTGGGACTAATTGAAGATTCTC
JMSF028M04+ GCTTCCAGAATAGAATTTCCCATGGAATGATTTCGGGACTGGGACTAATTGAAGATTCTC
JMSF048E23+ GCTTCCAGAATAGAATTTCCCATGGAATGATTTCGGGACTGGGACTAATTGAAGATTCTC
JMSF012J14+ GCTTCCAGAATAGAATTTCCCATGGAATGATTTCGGGACTGGGACTAATTGAAGATTCTC
                      ____________________________________________________________
consensus GCTTCCAGAATAGAATTTCCCATGGAATGATTTCGGGACTGGGACTAATTGAAGATTCTC
 
. : . : . : . : . : . :
JMFS153B02+ TACGCCCCAGATATCCAAACCAGGTTTGGCTCCTGCTCCCTGAAACGCTGGATCCACGTC
JMSF028M04+ TACGCCCCAGATATCCAAACCAGGTTTGGCTCCTGCTCCCTGAAACGCTGGATCCACGTC
JMSF048E23+ TACGCCCCAGATATCCAAACCAGGTTTGGCTCCTGCTCCCTGAAACGCTGGATCCACGTC
JMSF012J14+ TACGCCCCAGATATCCAAACCAGGTTTGGCTCCTGCTCCCTGAAACGCTGGATCCACGTC
                      ____________________________________________________________
consensus TACGCCCCAGATATCCAAACCAGGTTTGGCTCCTGCTCCCTGAAACGCTGGATCCACGTC
 
. : . : . : . : . : . :
JMFS153B02+ TTTACCAAACAGTGCCATTGCCTTTCAATTTTCAAACATCTGATTCTCAACAATCCATTA
JMSF028M04+ TTTACCAAACAGTGCCATTGCCTTTCAATTTTCAAACATCTGATTCTCAACAATCCATTA
JMSF048E23+ TTTACCAAACAGTGCCATTGCCTTTCAATTTTCAAACATCTGATTCTCAACAATCCACTA
JMSF012J14+ TTTACCAAACAGTGCCATTGCCTTTCAATTTTCAAACATCTGATTCTCAACAATCCATTA
                      ____________________________________________________________
consensus TTTACCAAACAGTGCCATTGCCTTTCAATTTTCAAACATCTGATTCTCAACAATCCATTA
 
. : . : . : . : . : . :
JMFS153B02+ CAGAATAACTTGAAATCAGCC
JMSF028M04+ CAGAATAACTTGAAATCAGCCCATCATGCTCAGAACCACATATCAAATCAGAAATGCTGA
JMSF048E23+ CAGAATAACTTGAAATCAGCCCATCATGCTCAGAACCACATATCAAATCAGAAATGCTGA
JMSF012J14+ CAGAATAACTTGAAATCAGCCCATCATGCTCAGAACCACATATCAAATCAGAAATGCTGA
                      ____________________________________________________________
consensus CAGAATAACTTGAAATCAGCCCATCATGCTCAGAACCACATATCAAATCAGAAATGCTGA
 
. : . : . : . : . : . :
JMSF028M04+ TAAAAGCTAAACCCAAACTGTATAACATAACAAAGATTCAAACTTTAGCCGCCCAGATTC
JMSF048E23+ TAAAAGCTAAACCCAAACTGTATAACATAACAAAGATTCAAACTTTAGCCGCCCAGATTC
JMSF012J14+ TAAAAGCTAAACCCAAACTGTATAACATAACAAAGATTCAAACTTTAGCCGCCCAGATTC
                      ____________________________________________________________
consensus TAAAAGCTAAACCCAAACTGTATAACATAACAAAGATTCAAACTTTAGCCGCCCAGATTC
 
. : . : . : . : . : . :
JMSF028M04+ TTCTTACGCAGAGTTCAGACCAGCAAAGAAACATTCTATCGATTCTAGCAAGCTTTTACC
JMSF048E23+ TTCTTACGCAGAGTTCAGACCAGCAAAGAAACATTCTATCGATTCTAGCAAGCTTTTACC
JMSF012J14+ TTCTTACGCAGAGTTCAGACCAGCAAAGAAACATTCTATCGATTCTAGCAAGCTTTTACC
                      ____________________________________________________________
consensus TTCTTACGCAGAGTTCAGACCAGCAAAGAAACATTCTATCGATTCTAGCAAGCTTTTACC