Contig 000658:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012I08Sequence249000658 (2)763008487 (2)ref|XP_010319368.1|2e-133PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-li
JMSF016G03Sequence248000658 (2)775008487 (2)ref|XP_004236890.1|8e-134PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-li

Alignment

This contig is upended


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JMSF016G03+                                           GGAGTCAAAAGAATTGGCTGAAGAAACA
JMSF012I08+                                                              GAAGAAACA
                      ____________________________________________________________
consensus                                             GGAGTCAAAAGAATTGGCTGAAGAAACA
 
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JMSF016G03+           GCAGCGACGGCCCCAATCCCTTGAGCGATAGCAGCCATTTTGCCCAAAAGCTTCTTCTGC
JMSF012I08+           GCAGCGACGGCCCCAATCCCTTGAGCGATAGAAGCCATTTTGCCCAAAAGCTTCTTCTGC
                      ____________________________________________________________
consensus             GCAGCGACGGCCCCAATCCCTTGAGCGATAGCAGCCATTTTGCCCAAAAGCTTCTTCTGC
 
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JMSF016G03+           TCTTCTTCCCCTTCTTCTCGATTCTTGAATGCTCTACGCGAGCTGTGTATGAAGAGGATT
JMSF012I08+           TCTTCTTCCCCTTCTTCTCGATTCTTGAATGCTCTACGCGAGCTGTGTATGAAGAGGATT
                      ____________________________________________________________
consensus             TCTTCTTCCCCTTCTTCTCGATTCTTGAATGCTCTACGCGAGCTGTGTATGAAGAGGATT
 
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JMSF016G03+           GCAGAAGCGCAGAGTGTTACAGTGAAGAAGAAAAGGGCATATAAAGAGAGGGACAAAGGG
JMSF012I08+           GCAGAAGCGCAGAGTGTTACAGTGAAGAAGAAAAGGGCATATAAAGAGAGGGACAAAGGG
                      ____________________________________________________________
consensus             GCAGAAGCGCAGAGTGTTACAGTGAAGAAGAAAAGGGCATATAAAGAGAGGGACAAAGGG
 
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JMSF016G03+           GCGTAGTTTTAGACAGAGAAATTTGGGGACGGAAACACC                     
JMSF012I08+           GCGTAGTTTTAGACAGAGAAATTTGGGGACGGAAACACCAAGAAATGGAAGCAGAAACCC
                      ____________________________________________________________
consensus             GCGTAGTTTTAGACAGAGAAATTTGGGGACGGAAACACCAAGAAATGGAAGCAGAAACCC