| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015G16 | Sequence | 559 | 000655 (11) | ref|XP_009802204.1| | 4e-79 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana sylvestris] | 668 | 000655 (11) | ref|XP_011089612.1| | 8e-73 | PREDICTED: adrenodoxin-like protein, mitochondrial [Sesamum indicum] |
| JMFF025C04 | Sequence | 590 | 000655 (11) | ref|XP_009802204.1| | 4e-78 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana sylvestris] | 746 | 000655 (11) | ref|XP_009802204.1| | 2e-77 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana sylvestris] |
| JMFS021G11 | Sequence | 638 | 000655 (11) | emb|CDP03973.1| | 7e-77 | unnamed protein product [Coffea canephora] | |||||
| JMSF012E12 | Sequence | 453 | 000655 (11) | ref|XP_009610150.1| | 8e-65 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana tomentosiformis] | 727 | 000655 (11) | ref|XP_009802204.1| | 4e-78 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana sylvestris] |
| JMSF012H17 | Sequence | 426 | 000655 (11) | ref|XP_009607744.1| | 5e-59 | PREDICTED: adrenodoxin, mitochondrial-like [Nicotiana tomentosiformis] ref|XP_00 | 722 | 000655 (11) | ref|XP_009802204.1| | 3e-78 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana sylvestris] |
| JMSF020I04 | Sequence | 669 | 000655 (11) | ref|XP_009802204.1| | 1e-77 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana sylvestris] | 637 | 000655 (11) | ref|XP_009802204.1| | 8e-78 | PREDICTED: adrenodoxin-like protein, mitochondrial [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF015G16- CTCATTTCTCCACTTACAGT
rJMFF025C04- CTCATTTCTCCACTTACAGT
rJMSF012H17- GT
rJMSF012E12- GT
____________________________________________________________
consensus CTCATTTCTCCACTTACAGT
. : . : . : . : . : . :
rJMFF015G16- TTCATATTAGAGTAACAGAAAAATAATAATATGCACCTCAAACTAGTATCCAAAACAAAT
rJMFF025C04- TTCATATTAGAGTAACAGAAAAATAATAATATGCACCTCAAACTAGTATCCAAAACAAAT
rJMSF012H17- TTCATATTAGAGTAACAGAAAAATAATAATATGCACCTCAAACTAGTATCCAAAACAAAT
JMSF020I04+ CAAAACAAAT
rJMSF012E12- TTCATATTAGAGTAACAGAAAAATAATAATATGCACCTCAAACTAGTATCCAAAACAAAT
____________________________________________________________
consensus TTCATATTAGAGTAACAGAAAAATAATAATATGCACCTCAAACTAGTATCCAAAACAAAT
. : . : . : . : . : . :
rJMFF015G16- TAGCTTTCCTGAACAAAGGAAAATGAGTTCCAGACATTTCTCAATGAAAGAGAAGTTTTC
rJMFF025C04- TAGCTTTCCTGAACAAAGGAAAATGAGTTCCAGACATTTCTCAATGAAAGAGAAGTTTTC
rJMSF012H17- TAGCTTTCCTGAACAAAGGAAAATGAGTTCCAGACATTTCTCAATGAAAGAGAAGTTTTC
rJMSF020I04- ATGAGTTCCAGACATTTCTCAATGAAAGAGAAGTTTTC
JMSF020I04+ TAGCTTTCCTGAACAAAGGAAAATGAGTTCCAGACATTTCTCAATGAAAGAGAAGTTTTC
rJMSF012E12- TAGCTTTCCTGAACAAAGGAAAATGAGTTCCAGACATTTCTCAATGAAAGAGAAGTTTTC
____________________________________________________________
consensus TAGCTTTCCTGAACAAAGGAAAATGAGTTCCAGACATTTCTCAATGAAAGAGAAGTTTTC
. : . : . : . : . : . :
rJMFF015G16- AGGTACCTTACACGGTTTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
rJMFF025C04- AGGTACCTTACACGGTTTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
rJMSF012H17- AGGTACCTTACACGGTTTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
rJMSF020I04- AGGTACCTTACACGGTTTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
JMSF020I04+ AGGTACCTTACACGGTTTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
JMFF025C04+ TTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
JMFF015G16+ ACAATAAAATTCC
rJMSF012E12- AGGTACCTTACACGGTTTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
____________________________________________________________
consensus AGGTACCTTACACGGTTTACATATTATTCAATTTAAAAATCTCAAAAACAATAAAATTCC
. : . : . : . : . : . :
rJMFF015G16- AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
rJMFF025C04- AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
rJMSF012H17- AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
rJMSF020I04- AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
JMSF020I04+ AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
JMFF025C04+ AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
JMFF015G16+ AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
JMFS021G11+ TCCTCTACGGAATATCCCAAGGCTTAGGCTCAG
rJMSF012E12- AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
____________________________________________________________
consensus AGTTGACCAACCTTGCAGAAATTCGACTCCTTTACGGAATATCCCAGGGCTTTGGCTCAG
. : . : . : . : . : . :
rJMFF015G16- GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
rJMFF025C04- GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
rJMSF012H17- GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
rJMSF020I04- GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
JMSF020I04+ GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
JMFF025C04+ GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
JMFF015G16+ GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
JMSF012H17+ GTCTGG
JMFS021G11+ GAACCGCCACGACCATCCCTTGCAGCTCTGGAGTGAGGACAACCTGGCATCCGAGCCTGG
rJMSF012E12- GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
JMSF012E12+ CCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
____________________________________________________________
consensus GGACAGCGACGACCATACCCTGAAGCTCCGGAGTGAGGACGACCTGGCATCCCAGTCTGG
. : . : . : . : . : . :
rJMFF015G16- AGTGCTTGTTCAAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
rJMFF025C04- AGTGCTTGTTCGAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
rJMSF012H17- AGTGCTTGTTCAAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
rJMSF020I04- AGTGCTTGTTCAAAACCATAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
JMSF020I04+ AGTGCTTGTTCAAAACCATAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
JMFF025C04+ AGTGCTTGTTCGAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
JMFF015G16+ AGTGCTTGTTCAAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
JMSF012H17+ AGTGCTTGTTCAAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
JMFS021G11+ AGTGCTTGTTCAGAACCCTAGCCCTAGAGTTCCTCCTCAGCACATACTGCTCATCGTAGG
rJMSF012E12- AGTGCTTGTTCAAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
JMSF012E12+ AGTGCTTGTTCAAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
____________________________________________________________
consensus AGTGCTTGTTCAAAACCCTAGCCCTAGAGTTCCTCTTGAGCACGTATTGTTCATCGTAGG
. : . : . : . : . : . :
rJMFF015G16- TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
rJMFF025C04- TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
rJMSF012H17- TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
rJMSF020I04- TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
JMSF020I04+ TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
JMFF025C04+ TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
JMFF015G16+ TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
JMSF012H17+ TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
JMFS021G11+ TAGGCGGGGGGAGCTTCTCGAGCCACTCCTGAGCAATGTGGACCTCGCACTCGGCGGAGC
rJMSF012E12- TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
JMSF012E12+ TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
____________________________________________________________
consensus TAGGTGGGGGGAGCTTCTCAAGCCACTCCTGCGCAATGTGGACCTCGCACTCAGCAGAAC
. : . : . : . : . : . :
rJMFF015G16- AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
rJMFF025C04- AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
rJMSF012H17- AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
rJMSF020I04- AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
JMSF020I04+ AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
JMFF025C04+ AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
JMFF015G16+ AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
JMSF012H17+ AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
JMFS021G11+ AAGAGTCGATCTCCTCCAGCCGGTGGGAAGCCGGGTCGATCAGGCCGTGGTTTGTTAGAG
rJMSF012E12- AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
JMSF012E12+ AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
____________________________________________________________
consensus AAGCATCGATCTCTTCGAGGCGGTGGGAAGCCGGGTCAATCAATCCATGATTGGTCAGAG
. : . : . : . : . : . :
rJMFF015G16- CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
rJMFF025C04- CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
rJMSF012H17- CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
rJMSF020I04- CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
JMSF020I04+ CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
JMFF025C04+ CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
JMFF015G16+ CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
JMSF012H17+ CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
JMFS021G11+ CCTTGAGAAGAGTGTGGCCGGAGAGTCCGACGACGTCACGCTTCAGGCCATCGGGGTCTA
rJMSF012E12- CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
JMSF012E12+ CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
____________________________________________________________
consensus CCTTAAGAAGAGTCTGGCCGGAGAGGCCGATCAAGCCGCGCTTCTGGCCCTCGGGATCAA
. : . : . : . : . : . :
rJMFF015G16- TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
rJMFF025C04- TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
rJMSF012H17- TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
rJMSF020I04- TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
JMSF020I04+ TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
JMFF025C04+ TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
JMFF015G16+ TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
JMSF012H17+ TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
JMFS021G11+ TGGCGAAGAGCTTCACGATCCGATCGGCGACCTT
rJMSF012E12- TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
JMSF012E12+ TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
____________________________________________________________
consensus TGGCGAAGAGGTTCACGATCCGATCGGAGACCTTAGCGGAGGAGGTACGGGTTGAGGAAG
. : . : . : . : . : . :
rJMFF015G16- AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGG
rJMFF025C04- AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
rJMSF012H17- AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
rJMSF020I04- AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
JMSF020I04+ AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
JMFF025C04+ AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
JMFF015G16+ AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
JMSF012H17+ AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
rJMSF012E12- AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
JMSF012E12+ AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
____________________________________________________________
consensus AGACAGAGGATGCAGAGGATCGAGCGATGGTTGCTCGAAAGGAGTGGGAGAGGGAGGGAT
. : . : . : . : . : . :
rJMFF025C04- TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTTC
rJMSF012H17- TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTACC
rJMSF020I04- TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTTC
JMSF020I04+ TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTTC
JMFF025C04+ TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTTC
JMFF015G16+ TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTTC
JMSF012H17+ TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTACC
rJMSF012E12- TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTACC
JMSF012E12+ TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTACC
____________________________________________________________
consensus TCCGGGAGATTTGGGAGGCGAGTCTTCGCAAATTCACGACGGCCATTTTCGAGAGCTTCC