Contig 000654:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF012C18-                                                  CATGACTAACATATATATAT
rJMSF045I10-                                                   ATGACTAACATATATATAT
                      ____________________________________________________________
consensus                                                     CATGACTAACATATATATAT
 
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rJMSF012C18-          GCATGCAACTCGGCGCTCAAATGAAATGGAGTGGATTCATTCTTAGCTAGCTAGCTTGCA
rJMSF045I10-          GCATGCAACTCGGCGCTCAAATGAAATGGAGTGGATTCATTCTTAGCTAGCTAGCTTGCA
                      ____________________________________________________________
consensus             GCATGCAACTCGGCGCTCAAATGAAATGGAGTGGATTCATTCTTAGCTAGCTAGCTTGCA
 
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rJMSF012C18-          TTGGGTTCACTACCTGTACGTACTATATACCCACCAATTCAATACGTACTACATGTATAT
rJMSF045I10-          TTGGGTTCACTACCTGTACGTACTATATACCCACCAATTCAATACGTACTACATGTATAT
                      ____________________________________________________________
consensus             TTGGGTTCACTACCTGTACGTACTATATACCCACCAATTCAATACGTACTACATGTATAT
 
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rJMSF012C18-          ATGTAGCGCAAAGCGAGGTCGTATGTAGCGTACAACCTAAGACCGATCGACTTCAATTCA
rJMSF045I10-          ATGTAGCGCAAAGCGAGGTCGTATGTAGCGTACAACCTAAGACCGATCGACTTCAATTCA
                      ____________________________________________________________
consensus             ATGTAGCGCAAAGCGAGGTCGTATGTAGCGTACAACCTAAGACCGATCGACTTCAATTCA
 
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rJMSF012C18-          ATTGGATCCATATATCTAGCTCACATGCAAACTAAACAAATTAAAATGAAATGAATGATA
rJMSF045I10-          ATTGGATCCATATATCTAGCTCACATGCAAACTAAACAAATTAAAATGAAATGAATGATA
                      ____________________________________________________________
consensus             ATTGGATCCATATATCTAGCTCACATGCAAACTAAACAAATTAAAATGAAATGAATGATA
 
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rJMSF012C18-          TACAGTACAGTAGAAATGGATGGGTATATATACTATGTCTCATTATCGATCTCATCAACC
rJMSF045I10-          TACAGTACAGTAGAAATGGATGGGTATATATACTATGTCTCATTATCGATCTCATCAACC
                      ____________________________________________________________
consensus             TACAGTACAGTAGAAATGGATGGGTATATATACTATGTCTCATTATCGATCTCATCAACC
 
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rJMSF012C18-          ATTATATGTATATATATATGTTAATGTGTAATTAATTAAGGCAGTGTGGGAGAAAGGGGA
rJMSF045I10-          ATTATATGTATATATATATATTAATGTGTAATTAATTAAGGCAGTGTGGGAGAAAGGGGA
                      ____________________________________________________________
consensus             ATTATATGTATATATATATGTTAATGTGTAATTAATTAAGGCAGTGTGGGAGAAAGGGGA
 
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rJMSF012C18-          GGAGTGGGAAGCTTAAGTTGTCCGCAATCACTGATATACAGAGTGTTGAGAGGTTTGTTC
rJMSF045I10-          GGAGTGGGAAGCTTAAGTTGTCCGCAATCACTGATATACAGAGTGTTGAGAGGTTTGTTC
                      ____________________________________________________________
consensus             GGAGTGGGAAGCTTAAGTTGTCCGCAATCACTGATATACAGAGTGTTGAGAGGTTTGTTC
 
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rJMSF012C18-          CATATTGCCCTCGCGTTTTTGGCTCTCCCATCTCCCAGAAATTCTGCTATTCCATTATAT
rJMSF045I10-          CATATTGCCCTCGCGTTTTTGGCTCTCCCATCTCCCAGAAATTCTGCTATTCCATTATAT
                      ____________________________________________________________
consensus             CATATTGCCCTCGCGTTTTTGGCTCTCCCATCTCCCAGAAATTCTGCTATTCCATTATAT
 
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rJMSF012C18-          TGCTGTATTCTTTCTGACGGCTTATATGTCGGAATTCCTGCAATCCTTCCAACCACATCC
rJMSF045I10-          TGCTGTATTCTTTCTGACGGCTTATATGTCGGAATTCCTGCAATCCTTCCAACCACATCC
JMSF045I10+                       TCTGACGGCTTATATGTCGGAATTCCTGCAATCCTTCCAACCACATCC
                      ____________________________________________________________
consensus             TGCTGTATTCTTTCTGACGGCTTATATGTCGGAATTCCTGCAATCCTTCCAACCACATCC
 
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rJMSF012C18-          ATTCCTTCAACCACGGTTCCAAACACGATGTTTTTGCTATCAAGCTGAGGGCAGGGTCCA
rJMSF045I10-          ATTCCTTCAACCACGGTTCCAAACACGATGTTTTTGCTATCAAGCTGAGGGCAGGGTCCA
JMSF045I10+           ATTCCTTCAACCACGGTTCCAAACACGATGTTTTTGCTATCAAGCTGAGGGCAGGGTCCA
                      ____________________________________________________________
consensus             ATTCCTTCAACCACGGTTCCAAACACGATGTTTTTGCTATCAAGCTGAGGGCAGGGTCCA
 
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rJMSF012C18-          GGTCCAGTGGTGATCAAGAACTCCACGTTGTGATAATCCGGATTCATCTTTACGTCATTG
rJMSF045I10-          GGTCCAGTGGTGATCAAGAACTCCACGTTGTGATAATCCGGATTCATCTTTACGTCATTG
JMFF042P23+                                         TGATAATCCGGATTCATCTNTACGTCATNG
JMSF045I10+           GGTCCAGTGGTGATCAAGAACTCCACGTTGTGATAATCCGGATTCATCTTTACGTCATTG
                      ____________________________________________________________
consensus             GGTCCAGTGGTGATCAAGAACTCCACGTTGTGATAATCCGGATTCATCTTTACGTCATTG
 
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rJMSF012C18-          TCGTCGTCATTCTCCGACAAGCACAACGACAATGTCCCCGGTCGAG              
rJMSF045I10-          TCGTCGTCATTCTCCGACAAGCACAACGACAATGTCCCCGGTCGAG              
JMFF042P23+           TCGTCGTCATTCTCCGACAAGCACAACGACAATGTCCCCGGTCGAGAATGTTCCAACAAG
JMSF045I10+           TCGTCGTCATTCTCCGACAAGCACAACGACAATGTCCCCGGTCGAGAATGTTCCAACAAG
                      ____________________________________________________________
consensus             TCGTCGTCATTCTCCGACAAGCACAACGACAATGTCCCCGGTCGAGAATGTTCCAACAAG
 
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JMFF042P23+           AACGCCTTTGATTCCACCGTCTCCGTGTTCCTAACCAGCGACGTAGGCGCCTTCACTTCC
JMSF045I10+           AACGCCTTTGATTCCACCGTCTCCGTGTTCCTAACCAGCGACGTAGGCGCCTTCACTTCC
                      ____________________________________________________________
consensus             AACGCCTTTGATTCCACCGTCTCCGTGTTCCTAACCAGCGACGTAGGCGCCTTCACTTCC
 
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JMFF042P23+           CCTTTGTCCCGCCGCCCTTGCCTTCCCGCCAGGAAGAATTGCCCCGGGAATATTTTATTT
JMSF045I10+           CCTTTGTCCCGCCGCCCTTGCCTTCCCGCCAGGAAGAATTGCCCCGGGAATATTTTATTT
JMSF012C18+                                                                     TT
                      ____________________________________________________________
consensus             CCTTTGTCCCGCCGCCCTTGCCTTCCCGCCAGGAAGAATTGCCCCGGGAATATTTTATTT
 
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JMFF042P23+           ACCAAACTGCCCTTGTAGCTCGACCCGGAGGAGCCTGTACACATGGCCTTGAAGTTGGAG
JMSF045I10+           ACCAAACTGCCCTTGTAGCTCGACCCGGAGGAGCCTGTACACATGGCCTTGAAGTTGGAG
JMSF012C18+           ACCAAACTGCCCTTGTAGCTCGACCCGGAGGAGCCTGTACACATGGCCTTGAAGTTGGAG
                      ____________________________________________________________
consensus             ACCAAACTGCCCTTGTAGCTCGACCCGGAGGAGCCTGTACACATGGCCTTGAAGTTGGAG
 
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JMFF042P23+           ACGGTGATGGGTACGAGGTTGCCGTATAGGCCCAGGACTACCCGCCCGACAGCCTCTGCG
JMSF045I10+           ACGGTGATGGGTACGAGGTTGCCGTATAGGCCCAGGACTACCCGCCCGACAGCCTCTGCG
JMSF012C18+           ACGGTGATGGGTACGAGGTTGCCGTATAGGCCCAGGACTACCCGCCCGACAGCCTCTGCG
                      ____________________________________________________________
consensus             ACGGTGATGGGTACGAGGTTGCCGTATAGGCCCAGGACTACCCGCCCGACAGCCTCTGCG
 
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JMFF042P23+           TCGGCGCAGAGGGCCAGGTCGTCGCCCAGGGTTCGGTTCACGAAGTAGGTCGGGCAGATG
JMSF045I10+           TCGGCGCAGAGGGCCAGGTCGTCGCCCAGGGTTCGGTTCACGAAGTAGGTCGGGCAGATG
JMSF012C18+           TCGGCGCAGAGGGCCAGGTCGTCGCCCAGGGTTCGGTTCACGAAGTAGGTCGGGCAGATG
                      ____________________________________________________________
consensus             TCGGCGCAGAGGGCCAGGTCGTCGCCCAGGGTTCGGTTCACGAAGTAGGTCGGGCAGATG
 
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JMFF042P23+           CTGAAGTCTAGGAAGACTCTGTCGGTGATGGTGGTGTCCGGCGACGGCGAGGGGGAGGAG
JMSF045I10+           CTGAAGTCTAGGAAGACTCTGTCGGTGATGGTGGTGTCCGGCGACGGCGAGGGGGAGGAG
JMSF012C18+           CTGAAGTCTAGGAAGACTCTGTCGGTGATGGTGGTGTCCGGCGACGGCGAGGGGGAGGAG
                      ____________________________________________________________
consensus             CTGAAGTCTAGGAAGACTCTGTCGGTGATGGTGGTGTCCGGCGACGGCGAGGGGGAGGAG
 
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JMFF042P23+           TAGGAGAGTGGCGCTGGGAGGGAGAAGCCGCCCAGGGTGGTGGAGAGGAAGAGGAGGGAA
JMSF045I10+           TAGGAGAGTGGCGCTGGGAGGGAGAAGCCGCCCAGGGTGGTGGAGAGGAAGAGGAGGGAA
JMSF012C18+           TAGGAGAGTGGCGCTGGGAGGGAGAAGCCGCCCAGGGTGGTGGAGAGGAAGAGGAGGGAA
                      ____________________________________________________________
consensus             TAGGAGAGTGGCGCTGGGAGGGAGAAGCCGCCCAGGGTGGTGGAGAGGAAGAGGAGGGAA
 
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JMFF042P23+           CGGCGGGAGAGGTGGAGGTGGGTGGCGCGTTGTTTTGGGTGGTGGGGAAGGAGGAGAGAA
JMSF045I10+           CGGCGGGAGAGGTGGAGGTGGGTGGCGCGTTGTTTTGGGTGGTGGGGAAGGAGGAGAGAA
JMSF012C18+           CGGCGGGAGAGGTGGAGGTGGGTGGCGCGTTGTTTTGGGTGGTGGGGAAGGAGGAGAGAA
                      ____________________________________________________________
consensus             CGGCGGGAGAGGTGGAGGTGGGTGGCGCGTTGTTTTGGGTGGTGGGGAAGGAGGAGAGAA
 
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JMFF042P23+           GAGGGGAGGAGGGTGGCGGAGATTCCCATGACCATCGAGCTGA                 
JMSF045I10+           GAGGGGAGGAGGGTGGCGGAGATTCCCATGACCATCGAGCTGAGAGTGACATGCTTAGGT
JMSF012C18+           GAGGGGAGGAGGGTGGCGGAGATTCCCATGACCATCGAGCTGAGAGTGACATGCTTAGGT
                      ____________________________________________________________
consensus             GAGGGGAGGAGGGTGGCGGAGATTCCCATGACCATCGAGCTGAGAGTGACATGCTTAGGT
 
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JMSF045I10+           TGGATCTGTCGCC                                               
JMSF012C18+           TGGATCTGTCGCCGTGTAGCATCGAAAGAGGATAGAGTTTGATTGCGTATTGCTTCAACC
                      ____________________________________________________________
consensus             TGGATCTGTCGCCGTGTAGCATCGAAAGAGGATAGAGTTTGATTGCGTATTGCTTCAACC