| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS038A01 | Sequence | 634 | 000653 (7) | emb|CDP05037.1| | 1e-90 | unnamed protein product [Coffea canephora] | |||||
| JMFS045G05 | Sequence | 594 | 000653 (7) | emb|CDP05037.1| | 5e-74 | unnamed protein product [Coffea canephora] | |||||
| JMFS125F09 | Sequence | 567 | 000653 (7) | emb|CDP05037.1| | 8e-71 | unnamed protein product [Coffea canephora] | |||||
| JMFS135E02 | Sequence | 626 | 000653 (7) | emb|CDP05037.1| | 6e-81 | unnamed protein product [Coffea canephora] | |||||
| JMFS165A12 | Sequence | 636 | 000653 (7) | emb|CDP05037.1| | 6e-83 | unnamed protein product [Coffea canephora] | |||||
| JMFS167H02 | Sequence | 627 | 000653 (7) | emb|CDP05037.1| | 1e-83 | unnamed protein product [Coffea canephora] | |||||
| JMSF012B05 | Sequence | 342 | 000653 (7) | emb|CDP05037.1| | 3e-19 | unnamed protein product [Coffea canephora] | 119 | 024490 | |||
This contig is upended
. : . : . : . : . : . :
JMFS038A01+ AGCCGTAAGTATTTATTTACTTGATCCTG
____________________________________________________________
consensus AGCCGTAAGTATTTATTTACTTGATCCTG
. : . : . : . : . : . :
JMFS038A01+ GTCCACAACATCAGGTGATACTTCCTCACATAAATACCNCAAGGTTTCCAGAGTAGCTTG
JMFS045G05+ GATACTTCCTCACATAAATACCCCAAGGTTTCCAGAGTAGCTTG
JMFS167H02+ CATCAGGTGATACTCCCTCACATAAATACCCCAAGGTTTCCAGAGTAGCTTG
JMFS165A12+ CATCAGGTGATACTCCCTCACATAAATACCCCAAGGTTTCCAGAGTAGCTTG
JMFS135E02+ TACTTCCTCACATAAATACCNCAAGGTTTCCAGAGTAGCTTG
____________________________________________________________
consensus GTCCACAACATCAGGTGATACTTCCTCACATAAATACCCCAAGGTTTCCAGAGTAGCTTG
. : . : . : . : . : . :
JMFS038A01+ CTTGACATGAGCTGGTACCTGATGAACATTTGACAACAGTTCTCCTATCAGCTCAGGCCA
JMFS125F09+ ACATGAGCTGGTACCTGATGAACATTTGACAACAGTTCTCCTATCAGCTCAGGCCA
JMFS045G05+ CTTGACATGAGCTGGTACCTGATGAACATTTGACAACAGTTCTCCTATCAGCTCAGGCCA
JMFS167H02+ CTTGACATGAGCTGGTACCTGATGAACATTTGACAACAGTTCTCCTATCAGCTCAGGCCA
JMFS165A12+ CTTGACATGAGCTGGTACCTGATGAACATTTGACAACAGTTCTCCTATCAGCTCAGGCCA
JMFS135E02+ CTTGACATGAGCTGGTACCTGATGAACATTTGACAACAGTTCTCCTATCAGCTCAGGCCA
____________________________________________________________
consensus CTTGACATGAGCTGGTACCTGATGAACATTTGACAACAGTTCTCCTATCAGCTCAGGCCA
. : . : . : . : . : . :
JMFS038A01+ TTGCTTTTGTGGCAACTCAATACCAGCAACCTTTGCAATCACTTGTGAAGCAGTAGAATG
JMFS125F09+ TTGCTTTTGTGGCAACTCAATACCAGCAACCTTTGCAATCACTTGTGAAGCAGTAGAATG
JMFS045G05+ TTGCTTTTGTGGCAACTCAATACCAGCAACCTTTGCAATCACTTGTGAAGCAGTAGAATG
JMFS167H02+ TTGCTTTTGTGGCAACTCAATACCAGCAACCTTTGCAATCACTTGTGAAGCAGTAGAATG
JMFS165A12+ TTGCTTTTGTGGCAACTCAATACCAGCAACCTTTGCAATCACTTGTGAAGCAGTAGAATG
JMFS135E02+ TTGCTTTTGTGGCAACTCAATACCAGCAACCTTTGCAATCACTTGTGAAGCAGTAGAATG
____________________________________________________________
consensus TTGCTTTTGTGGCAACTCAATACCAGCAACCTTTGCAATCACTTGTGAAGCAGTAGAATG
. : . : . : . : . : . :
JMFS038A01+ AGCATCAAGAACAGGAGAAGAAAGTGTCTGTAGCAAACATTTCTTAATCTGGGTCTTCAC
JMFS125F09+ AGCATCAAGAACAGGAGAAGAAAGTGTCTGTAGCAAACATTTCTTAATCTGGGTCTTCAC
JMFS045G05+ AGCATCAAGAACAGGAGAAGAAAGTGTCTGTAGCAAACATTTCTTAATCTGGGTCTTCAC
JMFS167H02+ AGCATCAAGAACAGGAGAAGAAAGTGTCTGTAGCAAACATTTCTTAATCTGGGTCTTCAC
JMFS165A12+ AGCATAAAGAACAGGAGAAGAAAGTGTCTGTAGCAAACATTTCTTAATCTGGGTCTTCAC
JMFS135E02+ AGCATCAAGAACAGGAGAAGAAAGTGTCTGTAGCAAACATTTCTTAATCTGGGTCTTCAC
____________________________________________________________
consensus AGCATCAAGAACAGGAGAAGAAAGTGTCTGTAGCAAACATTTCTTAATCTGGGTCTTCAC
. : . : . : . : . : . :
JMFS038A01+ ACCCGCATCTAGTGATAACCACCTTTGCACAAGCTCATATTTCCTATGTTGTTCCTTGGC
JMFS125F09+ ACCCGCATCTAGTGATAACCACCTTTGCACAAGCTCATATTTCCTATGTTGTTCCTTGGC
JMFS045G05+ ACCCGCATCTAGTGATAACCACCTTTGCACAAGCTCATATTTCCTATGTTGTTCCTTGGC
JMFS167H02+ ACCCGCATCTAGTGATAACCACCTTTGCACAAGCTCATATTTCCTATGTTGTTCCTTGGC
JMFS165A12+ ACCCGCATCTAGTGATAACCACCTTTGCACAAGCTCATATTTCCTATGTTGTTCCTTGGC
JMFS135E02+ ACCCGCATCTAGTGATAACCACCTTTGCACAAGCTCATATTTCCTATGTTGTTCCTTGGC
____________________________________________________________
consensus ACCCGCATCTAGTGATAACCACCTTTGCACAAGCTCATATTTCCTATGTTGTTCCTTGGC
. : . : . : . : . : . :
JMFS038A01+ ATCCAAGGCATTTTTAAGTATCAAACCTGCTAACTTGCGGCTATCAACTGGCTTTCCCTC
JMFS125F09+ ATCCAAGGCATTTTTAAGTATCAAACCTGCTAACTTGCGGCTATCAACTGGCTTTCCCTC
JMFS045G05+ ATCCAAGGCATTTTTAAGTATCAAACCTGCTAACTTGCGGCTATCAACGGGCTTTCCCTC
JMFS167H02+ ATCCAAGGCATTTTTAAGTATCAAACCTGCTAACTTGCGGCTATCAACTGGCTTTCCCTC
JMFS165A12+ ATCCAAGGCATTTTTAAGTATCAAACCTGCTAACTTGCGGCTATCAACTGGCTTTCCCTC
JMFS135E02+ ATCCAAGGCATTTTTAAGTATCAAACCTGCTAACTTGCGGCTATCAACTGGCTTTCCCTC
JMSF012B05+ TATCAANCCTGCTAACTTGCGGCTATCAACTGGCTTTCCCTC
____________________________________________________________
consensus ATCCAAGGCATTTTTAAGTATCAAACCTGCTAACTTGCGGCTATCAACTGGCTTTCCCTC
. : . : . : . : . : . :
JMFS038A01+ ATTGGAAAGCTCCCCAGAGAGCGACAAGAGGAAACCAGGAAGGTTTTGCTCCTGAAATTG
JMFS125F09+ ATTGGAAAGCTCCCCAGAGAGCGACAAGAGGAAACCAGGAAGGTTTTGCTCCTGAAATTG
JMFS045G05+ ATTGGAAAGCTCCCCAGAGAGNGACAAGAGGAAACCAGGAAGG---GGGGCTCCNAAATG
JMFS167H02+ ATTGGAAAGCTCCCCAGAGAGCGACAAGAGGAAACCAGGAAGGTTTTGCTCCTGAAATTG
JMFS165A12+ ATTGGAAAGCTCCCCAGAGAGCGACAAGAGGAAACCAGGAAGGTTTTGCTCCTGAAATTG
JMFS135E02+ ATTGGAAAGCTCCCCAGAGAGCGACAAGAGGAAACCAGGAAGGTTTTGCTCCTGAAATTG
JMSF012B05+ ATTGGAAAGCCCCCCAGAGAGCGACAAGAGGAAACCAGGAAGGTTTTGCTCCTGAAATTG
____________________________________________________________
consensus ATTGGAAAGCTCCCCAGAGAGCGACAAGAGGAAACCAGGAAGGTTTTGCTCCTGAAATTG
. : . : . : . : . : . :
JMFS038A01+ TTTGAGAGTTTCTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
JMFS125F09+ TTTGAGAGTTTCTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
JMFS045G05+ GNTGAGAGTTTNTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
JMFS167H02+ TTTGAGAGTTTCTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
JMFS165A12+ TTTGAGAGTTTCTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
JMFS135E02+ TTTGAGAGTTTCTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
JMSF012B05+ TTTGAGAGTTTCTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
____________________________________________________________
consensus TTTGAGAGTTTCTTCTGCATGTTTCCGAATTGTTGAATCGATTGATTGTGCATTCAAAAG
. : . : . : . : . : . :
JMFS038A01+ AAACTGAGTGACTTCCATTGCCATACTATTTCTGAAAGCTTGAGAGTGGAATGCAAGGAG
JMFS125F09+ AAACTGAGTGACTTCCATTGCCATACTATTTCTGAAAGCTTGAGAGTGGAATGCAAGGAG
JMFS045G05+ TAATTGAGTTAATTCCATTGCCATACTATTTCTGAAAGATTGAGAGAGGAATGCAAGGAG
JMFS167H02+ AAACTGAGTGACTTCCATTGCCATACTATTTCTGAAAGCTTGAGAGTGGAATGCAAGGAG
JMFS165A12+ AAACTGAGTGACTTCCATTGCCATACTATTTCTGAAAGCTTGAGAGTGGAATGCAAGGAG
JMFS135E02+ AAACTGAGTGACTTCCATTGCCATACTATTTCTGAAAGCTTGAGAGTGGAATGCAAGGAG
JMSF012B05+ AAACTGAGTGACTTCCATTGCCATACTATTTCTGAAAGCTTGAGAGTGGAATGCAAGGAG
____________________________________________________________
consensus AAACTGAGTGACTTCCATTGCCATACTATTTCTGAAAGCTTGAGAGTGGAATGCAAGGAG
. : . : . : . : . : . :
JMFS038A01+ ACACCACGATTTGAGATCGAACAGAGCAAAAGTGGCGGCTCCTGAAAACCCTAAGAGAGA
JMFS125F09+ ACACCACGATTTGAGATCGAACAGAGCAAAAGTGGCGGCTCCTGAAAACCCTAAGAGAGA
JMFS045G05+ ACACCTTTATTTGAGATCGATCAGAGCATAAGTG
JMFS167H02+ ACACCACGATTTGAGATCGAACAGAGCAAAAGTGGCGGCTCCTGAAAACCCTAAGAGAGA
JMFS165A12+ ACACCACGATTTGAGATCGAACAGAGCAAAAGTGGCGGCTCCTGAAAACCCTAAGAGAGA
JMFS135E02+ ACACCACGATTTGAGATCGAACAGAGCAAAAGTGGCGGCTCCTGAAAACCCTAAGAGAGA
JMSF012B05+ ACACCACGATTTGAGATCGAACAGAGCAAAAGTGGCGGCTCCTGAAAACCCTAAGAGAGA
____________________________________________________________
consensus ACACCACGATTTGAGATCGAACAGAGCAAAAGTGGCGGCTCCTGAAAACCCTAAGAGAGA
. : . : . : . : . : . :
JMFS038A01+ GAAGA
JMFS125F09+ GAAGAGAGAGGGGACGGGAGCTAGGGAGAGT
JMFS167H02+ GAAGAGAGAGGGGACGGGAGCTAGGGAGAGTGAGA
JMFS165A12+ GAAGAGAGAGGGGACGGGAGCTAGGGAGAGTGAGA
JMFS135E02+ GAAGAGAGAGGGGACGGGAGCTAGGGAGAGTGAGATGTAAA
JMSF012B05+ GAAGAGAGAGGGGACGGGAGCTAGGGAGAGTGAGATGTAAAGCTGGAAACCTGGAATTCC
____________________________________________________________
consensus GAAGAGAGAGGGGACGGGAGCTAGGGAGAGTGAGATGTAAAGCTGGAAACCTGGAATTCC