Contig 000646:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011A11Sequence168000646 (2)693005629 (2)ref|XP_009614358.1|177PREDICTED: uncharacterized protein LOC104107297 [Nicotiana tomentosiformis]
JMSF011N03Sequence385000646 (2)ref|XP_009627275.1|3e-08PREDICTED: uncharacterized protein LOC104117858 isoform X2 [Nicotiana tomentosi201005629 (2)ref|XP_009613415.1|1e-24PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104106550 [Nicotiana

Alignment

This contig is upended


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JMSF011N03+ TTCACAACTCCTGATAGAACCGCAAGATAGAACG
                      ____________________________________________________________
consensus TTCACAACTCCTGATAGAACCGCAAGATAGAACG
 
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JMSF011N03+ CAGAACACCNTAACTTATTTTCNTGTTNCAATATGCGGCCGCTNTCGTGGACTCCCCTCT
                      ____________________________________________________________
consensus CAGAACACCNTAACTTATTTTCNTGTTNCAATATGCGGCCGCTNTCGTGGACTCCCCTCT
 
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JMSF011N03+ TCTCCACAATATCCAGAATCTTCATTAGCTTCTCCACAAATTCTTTGTTTTTTCCGGNTG
                      ____________________________________________________________
consensus TCTCCACAATATCCAGAATCTTCATTAGCTTCTCCACAAATTCTTTGTTTTTTCCGGNTG
 
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JMSF011N03+ NTGCAATGTGAACAACTGTTTCGTTTCTTATCGTGATAGGATGAGTAGCGCACTCTGGAT
                      ____________________________________________________________
consensus NTGCAATGTGAACAACTGTTTCGTTTCTTATCGTGATAGGATGAGTAGCGCACTCTGGAT
 
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JMSF011N03+ GTTCTTTCAGAATTTTTTCAGCTCTTGTCCAGTTGCCCTTTATGGTAGCATCAAACAGAG
                      ____________________________________________________________
consensus GTTCTTTCAGAATTTTTTCAGCTCTTGTCCAGTTGCCCTTTATGGTAGCATCAAACAGAG
 
. : . : . : . : . : . :
JMSF011N03+ CTTTGTGTATTTTTTCTTCGTCTGCTTCTTTGTTATCGTGATGTGGTTTTTCAACATCAG
JMSF011A11+ TTTCTTCGTCTGCTTCTTTGTNATCGTGATGTGGTTTTTCAACATCAG
                      ____________________________________________________________
consensus CTTTGTGTATTTTTTCTTCGTCTGCTTCTTTGTTATCGTGATGTGGTTTTTCAACATCAG
 
. : . : . : . : . : . :
JMSF011N03+ GGGGTTTAGCCAAGTGAAAACCGCAGAGGGTTGATGATATCTTCTC
JMSF011A11+ GGGGTTTAGCCAAGTGAAAACCGCAGAGGGTTGATGATATCTTCTCCATTGGTCTTTGCT
                      ____________________________________________________________
consensus GGGGTTTAGCCAAGTGAAAACCGCAGAGGGTTGATGATATCTTCTCCATTGGTCTTTGCT
 
. : . : . : . : . : . :
JMSF011A11+ TGAACAATTATCAAGGATAATTTTGTAAGTATGCAGTGGTGTGCAACTAACTAAGCTATC
                      ____________________________________________________________
consensus TGAACAATTATCAAGGATAATTTTGTAAGTATGCAGTGGTGTGCAACTAACTAAGCTATC