Contig 000642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010G09Sequence471000642 (2)gb|EYU40771.1|3e-10hypothetical protein MIMGU_mgv1a003948mg [Erythranthe guttata]758022467ref|XP_010317394.1|2e-94PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-
JMSF050C19Sequence663000642 (2)ref|XP_006344146.1|3e-115PREDICTED: cysteine--tRNA ligase-like [Solanum tuberosum]595017276ref|XP_010276942.1|4e-18PREDICTED: cysteine--tRNA ligase, cytoplasmic [Nelumbo nucifera]

Alignment

This contig is upended


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JMSF050C19+                                     TCGCCAGGCTTGCAGCCTTCCACAAGGCAAAGTC
                      ____________________________________________________________
consensus                                       TCGCCAGGCTTGCAGCCTTCCACAAGGCAAAGTC
 
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JMSF050C19+           AGCCGGATTTCTCTTTCTTGAATCAACAGCAACTCGCTCACCAGCTCGGTTATCTTCTAG
                      ____________________________________________________________
consensus             AGCCGGATTTCTCTTTCTTGAATCAACAGCAACTCGCTCACCAGCTCGGTTATCTTCTAG
 
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JMSF050C19+           TTTCCGTCCAGATAACTTACCATACTCTGGAAATTTATCAACAGAGAAATATACATCCCC
                      ____________________________________________________________
consensus             TTTCCGTCCAGATAACTTACCATACTCTGGAAATTTATCAACAGAGAAATATACATCCCC
 
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JMSF050C19+           ATCAACTGTGTAGGCACAACCATTGCTCATTATTTGTGCTATCATTTCCTTTATTTGATC
                      ____________________________________________________________
consensus             ATCAACTGTGTAGGCACAACCATTGCTCATTATTTGTGCTATCATTTCCTTTATTTGATC
 
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JMSF050C19+           CATATGCTCTGTAACGCGCGGCTGATTGGTGGGCATGAGGCACTGGAGATCAATCATATC
                      ____________________________________________________________
consensus             CATATGCTCTGTAACGCGCGGCTGATTGGTGGGCATGAGGCACTGGAGATCAATCATATC
 
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JMSF050C19+           ATTAAGAAACTCTTGGCAAAACCGACCACTCAATGCTACTGGATCCTCCCCAAGTTCATT
                      ____________________________________________________________
consensus             ATTAAGAAACTCTTGGCAAAACCGACCACTCAATGCTACTGGATCCTCCCCAAGTTCATT
 
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JMSF050C19+           TGCTCTTTTAATTATCTTGTCATCCACATCCGTAAAATTACGCACATAAACCACTTCATA
                      ____________________________________________________________
consensus             TGCTCTTTTAATTATCTTGTCATCCACATCCGTAAAATTACGCACATAAACCACTTCATA
 
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JMSF050C19+           TCCCAAGTATCTTAGATATCTGTAGAGAATATCGAAAGCTACATAGGCTCGAGCGTGGCC
                      ____________________________________________________________
consensus             TCCCAAGTATCTTAGATATCTGTAGAGAATATCGAAAGCTACATAGGCTCGAGCGTGGCC
 
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JMSF050C19+           AATGTGGCTGAAATCGTAGCTGGTGACGCCACAGATATACATTCCCACCTTACCATCCTC
JMSF010G09+                    GAAATCGTAGCTGGTGACGCCACAGATATACATTCCCACCTTACCATCCTC
                      ____________________________________________________________
consensus             AATGTGGCTGAAATCGTAGCTGGTGACGCCACAGATATACATTCCCACCTTACCATCCTC
 
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JMSF050C19+           CTTCGGCTTGAAAACTTCCTTCTGCTTAGTCATGCTATTGTGCAGGAACAGTTCCAGCCG
JMSF010G09+           CTTCGGCTTGAAAACTTCCTTCTGCTTAGTCATGCTATTGTGCAGGAACAGTTCCAGCCG
                      ____________________________________________________________
consensus             CTTCGGCTTGAAAACTTCCTTCTGCTTAGTCATGCTATTGTGCAGGAACAGTTCCAGCCG
 
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JMSF050C19+           TTTCTTCCCCATTTTTGGAGTTTCTCCAATCGGCCAGATCAATTGAGCACCAACAAAACC
JMSF010G09+           TTTCTTCCCCATTTTTGGAGTTTCTCCAATCGGCCAGATCAATTGAGCACCAACAAAACC
                      ____________________________________________________________
consensus             TTTCTTCCCCATTTTTGGAGTTTCTCCAATCGGCCAGATCAATTGAGCACCAACAAAACC
 
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JMSF050C19+           CTAAGCCCTCTGCTGTTAAAACTGATGC                                
JMSF010G09+           CTAAGCCCTCTGCTGTTAAAACTGATGCTTTTATTTTCGGGCATTCAAGATTTGGGTTTA
                      ____________________________________________________________
consensus             CTAAGCCCTCTGCTGTTAAAACTGATGCTTTTATTTTCGGGCATTCAAGATTTGGGTTTA
 
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JMSF010G09+           ACCAGGTTCTTTCTCAAAATAAATGGCAGATTGGCAGAGGGCGGCGGTCTGCGGAGTTCC
                      ____________________________________________________________
consensus             ACCAGGTTCTTTCTCAAAATAAATGGCAGATTGGCAGAGGGCGGCGGTCTGCGGAGTTCC
 
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JMSF010G09+           TGTCGCTGGTTCACGGTGGACGGCGGCGGCGGTCAGTGGAGCAAACAGTCGCCGGTTCAC
                      ____________________________________________________________
consensus             TGTCGCTGGTTCACGGTGGACGGCGGCGGCGGTCAGTGGAGCAAACAGTCGCCGGTTCAC
 
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JMSF010G09+           TGCAGTCGGCGGCGGCCTCGGGTTCGCGGTCGCCTGTACGGTTGTACTCTGCAGGCAGCG
                      ____________________________________________________________
consensus             TGCAGTCGGCGGCGGCCTCGGGTTCGCGGTCGCCTGTACGGTTGTACTCTGCAGGCAGCG
 
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JMSF010G09+           AACGGAAGATTGGGAAGAGAGTAAACCGAGAGACGAGAGAGAGTGAGAGGGCGAGAGTCC
                      ____________________________________________________________
consensus             AACGGAAGATTGGGAAGAGAGTAAACCGAGAGACGAGAGAGAGTGAGAGGGCGAGAGTCC