Contig 000641:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF010F23-                  CATTAAATCTTAAAGGACGATCTATGGTGATATTACAATGGTGAGCAGAACA
rJMSF014G19-                                                            GAGCAGAACA
                      ____________________________________________________________
consensus                     CATTAAATCTTAAAGGACGATCTATGGTGATATTACAATGGTGAGCAGAACA
 
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rJMSF010F23-          TATTCATCGGCAATAAATTAAACACAACCCATAAAAACCTAGAATTTAGTCAAAGTATAA
rJMSF014G19-          TATTCATCGGCAATAAATTAAACACAACCCATAAAAACCTAGAATTTAGTCAAAGTATAA
                      ____________________________________________________________
consensus             TATTCATCGGCAATAAATTAAACACAACCCATAAAAACCTAGAATTTAGTCAAAGTATAA
 
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rJMSF010F23-          CTACTTAAAACCATGGTAATACTCAACAAGATCGACAATCTTAATCACTTATACCCAACA
JMCP003C06+                                CTCAACAAGATCGACAATCTTAATCACTTATACCCAACA
rJMSF014G19-          CTACTTAAAACCATGGTAATACTCAACAAGATCGACAATCTTAATCACTTATACCCAACA
                      ____________________________________________________________
consensus             CTACTTAAAACCATGGTAATACTCAACAAGATCGACAATCTTAATCACTTATACCCAACA
 
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rJMSF010F23-          GTTGCGAACATG-AAGACAAATAATAACATTTATATGTTCTGCAAATTAAAGAGCTAGGA
JMCP003C06+           GTTGCGAACATGAAAGATAAATAATAACATTTATATGTTCTGCAAATTAAAGAGCTAGGA
rJMSF014G19-          GTTGCGAACATGAAAGACAAATAATAACATTTATATGTTCTGCAAATTAAAGAGCTAGGA
                      ____________________________________________________________
consensus             GTTGCGAACATGAAAGACAAATAATAACATTTATATGTTCTGCAAATTAAAGAGCTAGGA
 
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rJMSF010F23-          AGTGTTCCTCAGGGCAAATCATCATCATCTTCATCTTCGAACTCCTCCTCATTTTGGTAG
JMCP003C06+           AGTGTTCCTCAGGGCAAATCATCATCATCTTCATCTTCGAACTCCTCCTCATTTTGGTAG
rJMSF014G19-          AGTGTTCCTCAGGGCAAATCATCATCATCTTCATCTTCGAACTCCTCCTCATTTTGGTAG
                      ____________________________________________________________
consensus             AGTGTTCCTCAGGGCAAATCATCATCATCTTCATCTTCGAACTCCTCCTCATTTTGGTAG
 
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rJMSF010F23-          CTGTTCTCCATGAAATTGTTGTTGTTTTCGTTGAAATACCTGCTGTTTCCAAACTGGTTT
JMCP003C06+           CTGTTCTCCATGAAATTGTTGTTGTTTTCGTTGAAATACCTGCTGTTTCCAAACTGGTTT
rJMSF014G19-          CTGTTCTCCATGAAATTGTTGTTGTTTTCGTTGAAATACCTGCTGTTTCCAAACTGGTTT
                      ____________________________________________________________
consensus             CTGTTCTCCATGAAATTGTTGTTGTTTTCGTTGAAATACCTGCTGTTTCCAAACTGGTTT
 
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rJMSF010F23-          CTTGAATTGTCCAATGGGTTTCTGGGGAACCTCTCGCCGTTGTTATAATATCTCCCACCG
JMCP003C06+           CTTGAATTGTCCAATGGGTTTCTGGGGAACCTCTCGCCGTTGTTATAATATCACCCACCG
rJMSF014G19-          CTTGAATTGTCCAATGGGTTTCTGGGGAACCTCTCGCCGTTGTTATAATATCTCCCACCG
                      ____________________________________________________________
consensus             CTTGAATTGTCCAATGGGTTTCTGGGGAACCTCTCGCCGTTGTTATAATATCTCCCACCG
 
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rJMSF010F23-          TCCAAGAATCTGGTGTCACTCATCCCCTGTTTCTTGAATCCTCCATTAGCATCGCCGCCG
JMCP003C06+           TCCAAGAATCTGGTGTCACTCATCCCCTGTTTCTTGAATCCTCCATTAGCATCGCCGCCG
rJMSF014G19-          TCCAAGAATCTGGTGTCACTCATCCCCTGTTTCTTGAATCCTCCATTAGCATCGCCGCCG
                      ____________________________________________________________
consensus             TCCAAGAATCTGGTGTCACTCATCCCCTGTTTCTTGAATCCTCCATTAGCATCGCCGCCG
 
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rJMSF010F23-          TTGTACTGATCATTCCGGTTGCCGGTGGTGGTGGTGGCGGAGGGGTACCTCTCCTTCTGG
JMCP003C06+           TTGTACTGATCATTCCGGTTGCCGGTGGTGGTGGTGGCGGAGGGGTACCTCTCCTTCTGG
rJMSF014G19-          TTGTACTGATCATTCCGGTTGCCGGTGGTGGTGGTGGCGGAGGGGTACCTCTCCTTCTGG
                      ____________________________________________________________
consensus             TTGTACTGATCATTCCGGTTGCCGGTGGTGGTGGTGGCGGAGGGGTACCTCTCCTTCTGG
 
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rJMSF010F23-          TTGTTGAAGTAATTCTCGCCGCCGTTGGTGTAGCCGCTCTGCATGAATGTGTCACTGGGC
JMCP003C06+           TTGTTGAAGTAATTCTCGCCGCCGTTGGTGTA                            
rJMSF014G19-          TTGTTGAAGTAATTCTCGCCGCCGTTGGTGTAGCCGCTCTGCATGAATGTGTCACTGGGC
                      ____________________________________________________________
consensus             TTGTTGAAGTAATTCTCGCCGCCGTTGGTGTAGCCGCTCTGCATGAATGTGTCACTGGGC
 
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rJMSF010F23-          ATGGATGTTTTCTGCTTGCCGGCGCCGGCGCCGGCGGAGGTATCCTCCGGGACGGTGACG
rJMSF014G19-          ATGGATGTTTTCTGCTTGCCGGCGCCGGCGCCGGCGGAGGTATCCTCCGGGACGGTGACG
                      ____________________________________________________________
consensus             ATGGATGTTTTCTGCTTGCCGGCGCCGGCGCCGGCGGAGGTATCCTCCGGGACGGTGACG
 
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rJMSF010F23-          TAGGAAACGGGGCTGTAGTTCTTGGGGAGGTATTTCTTGTTGGGAATATTCTCCTCC   
rJMSF014G19-          TACGAAACGGGGCTGTAGTTCTTGGGGAGGTATTTCTTGTTGGGAATATTCTCCTCCCAG
JMSF010F23+                     GGCTGTAGTTCTTGGGGAGGTATTTCTTGTTGGGAATATTCTCCTCCCAG
                      ____________________________________________________________
consensus             TAGGAAACGGGGCTGTAGTTCTTGGGGAGGTATTTCTTGTTGGGAATATTCTCCTCCCAG
 
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rJMSF014G19-          GAAGGGAGGTTTTTGGCGGCGGCGGTGGTGGATTCACGGCCGTAAAGACCGTAACCGCCG
JMSF014G19+                                        GGATTCACGNCCGTAAAGACCGTAGCCGCCG
JMSF010F23+           GAAGGGAGGTTTTTGGCGGCGGCGGTGGTGGATTCACGGCCGTAAAGACCGTAGCCGCCG
                      ____________________________________________________________
consensus             GAAGGGAGGTTTTTGGCGGCGGCGGTGGTGGATTCACGGCCGTAAAGACCGTAGCCGCCG
 
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rJMSF014G19-          TTTTCAGATTCCTGGACGAA                                        
JMSF014G19+           TTTTCAGATTCCTGGACGAAGTTGGGCTGTTGTTCTTGGGGGTTTAATGTTGTCTGCGCC
JMSF010F23+           TTTTCAGATTCCTGGACGAAGTTGGGCTGTTGTTCTTGGGGGTTTAATGTTGTCTGCGCC
                      ____________________________________________________________
consensus             TTTTCAGATTCCTGGACGAAGTTGGGCTGTTGTTCTTGGGGGTTTAATGTTGTCTGCGCC
 
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JMSF014G19+           TTGATAACAACGTTGTTTCTGGGAATTTTGCTGAAGAACTGACTTTCTCTTGCATGGAGA
JMSF010F23+           TTGATAACAACGTTGTTTCTGGGAATTTTGCTGAAGAACTGACTTTCTCTTGCATGGTGA
                      ____________________________________________________________
consensus             TTGATAACAACGTTGTTTCTGGGAATTTTGCTGAAGAACTGACTTTCTCTTGCATGGTGA
 
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JMSF014G19+           TGAAGTGGGGAAAGAAGGGAGAAGAGGAAGAAGATTGAGAAATGAGTGACAATGGAAGCC
JMSF010F23+           TGAAGTGGGGAAAGAAGGGAGAAGAGGAAGAAGATTGAGAAATGAGTGACAATGGAAGCC
                      ____________________________________________________________
consensus             TGAAGTGGGGAAAGAAGGGAGAAGAGGAAGAAGATTGAGAAATGAGTGACAATGGAAGCC
 
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JMSF014G19+           ATGGAAGGAGAGAGACGACAGAGAAACAGTGATACGATGATGTTTGGTTGTGTTGTGG  
JMSF010F23+           ATGGAAGGAGAGAGACGACAGAGAAACAGTGATACGATGATGTTTGGTTGTGTTGTGGTA
                      ____________________________________________________________
consensus             ATGGAAGGAGAGAGACGACAGAGAAACAGTGATACGATGATGTTTGGTTGTGTTGTGGTA