Contig 000639:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007N02Sequence382000639 (5)ref|XP_009767272.1|7e-31PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana sylvestris]744011698 (5)ref|XP_009614171.1|3e-122PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform
JMSF010D08Sequence247000639 (5)692011698 (5)ref|XP_009614171.1|1e-127PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform
JMSF013K22Sequence236000639 (5)ref|XP_011084098.1|9e-09PREDICTED: probable inactive receptor kinase At2g26730 [Sesamum indicum]767011698 (5)ref|XP_009614171.1|2e-126PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform
JMSF045D13Sequence748000639 (5)ref|XP_009371417.1|2e-57PREDICTED: probable inactive receptor kinase At2g26730 [Pyrus x bretschneideri]
JMSF051A13Sequence656000639 (5)ref|XP_009371417.1|8e-43PREDICTED: probable inactive receptor kinase At2g26730 [Pyrus x bretschneideri]750011698 (5)ref|XP_009614171.1|1e-114PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform

Alignment

This contig is upended


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JMSF007N02+                                                           GGATAGTGTAGT
                      ____________________________________________________________
consensus                                                             GGATAGTGTAGT
 
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JMSF007N02+           GGGAATAGACCCATTTAGGCGATTGTTCGAAACATTGAAATCAGTTAACCTTAAAGGATT
JMSF045D13+                                                                  GGATT
                      ____________________________________________________________
consensus             GGGAATAGACCCATTTAGGCGATTGTTCGAAACATTGAAATCAGTTAACCTTAAAGGATT
 
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JMSF007N02+           GATGCTAGGGAGTGTCCCATTAAAGCCATTGTTCTGCAAGTAAAGCCGAGTCAAATTGCT
JMSF045D13+           GATGNTAGGGAGTGTCCCATTAAAGCCATTGTTTTGCAAGTAAAGCCGAGTCAAATTGCT
                      ____________________________________________________________
consensus             GATGCTAGGGAGTGTCCCATTAAAGCCATTGTTTTGCAAGTAAAGCCGAGTCAAATTGCT
 
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JMSF007N02+           TAAATTGTTGACGGCGAACGGGATTGGCCCGGAAAAGTTGTTAGATGACATGTCAAGGCG
JMSF045D13+           TAAATTGTTGACGGCGAACGGGATTGGCCCGGAAAAGTTGTTAGATGACATGTCAAGGCG
JMSF013K22+                                        CGGAAAAGTTGTTAGATGACATGTCAAGGCG
JMSF051A13+                                        CGGAAAAGTTGTTAGATGACATGTCAAGGCG
                      ____________________________________________________________
consensus             TAAATTGTTGACGGCGAACGGGATTGGCCCGGAAAAGTTGTTAGATGACATGTCAAGGCG
 
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JMSF007N02+           GATAAGTCGGGTCACCCCGGTGATACTCGCCGGAAACCCGCCGGAGAGCAAGTTGTTCTG
JMSF045D13+           GATAAGTCGGGTCACCCCGGTGATACTCGCCGGAAACCCGCCGGAGAGCAAGTTGTTCTG
JMSF013K22+           GATAAGTCGGGTCACCCCGGTGATACTCGCCGGAAACCCGCCGGAGAGCAAGTTGTTCTG
JMSF051A13+           GATAAGTCGGGTCACCCCGGTGATACTCGCCGGAAACCCGCCGGAGAGCAAGTTGTTCTG
                      ____________________________________________________________
consensus             GATAAGTCGGGTCACCCCGGTGATACTCGCCGGAAACCCGCCGGAGAGCAAGTTGTTCTG
 
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JMSF007N02+           GAGATAGAGGCTACGGAGGAGCTTGAGGTTAGAGAAATCCTGCGGGATTGGACCGGTGAG
JMSF045D13+           GAGATAGAGGCTACGGAGGAGCTTGAGGTTAGAGAAATCNTGCGGGATTGGACCGGTGAG
JMSF013K22+           GAGATAGAGGCTACGGAGGAGCTTGAGGTTAGAGAAATCCTGCGGGATTGGACCGGTGAG
JMSF051A13+           GAGATAGAGGCTACGGAGGAGCTTGAGGTTAGAGAAATCNTGCGGGATTGGACCGGTGAG
                      ____________________________________________________________
consensus             GAGATAGAGGCTACGGAGGAGCTTGAGGTTAGAGAAATCCTGCGGGATTGGACCGGTGAG
 
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JMSF007N02+           CCGGTTGGACCGGAGGCTAAGAACCCGAAGCCGGCTCAGGCGTCCCAGCGTATTCGCCGG
JMSF045D13+           CCGGTTGGACCGGAGGCTAAGAACCCGAAGCCGGCTCAGGCGTCCCAGCGTATTCGCCGG
JMSF013K22+           CCGGTTGGACCGGAGGCTAAGAACCCGAAGCCGGCTCAGGCGTCCCAGCGTATTCGCCGG
JMSF051A13+           CCGGTTGGACCGGAGGCTAAGAACCCGAAGCCGGCTCAGGCGTCCCAGCGTATTCGCCGG
                      ____________________________________________________________
consensus             CCGGTTGGACCGGAGGCTAAGAACCCGAAGCCGGCTCAGGCGTCCCAGCGTATTCGCCGG
 
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JMSF007N02+           AATATTCCCC                                                  
JMSF045D13+           AATATTCCCCACCAAGCCGACGCCGGGAAGCCGGAGAGCGAATACAAACGACTGGTTATC
JMSF013K22+           AATATTCCCCACCAAGCCGACGCC                                    
JMSF051A13+           AATATTCCCCACCAAGCCGACGCCGGGAAGCCGGAGAGCGAATACAAACGACTGGTTATC
                      ____________________________________________________________
consensus             AATATTCCCCACCAAGCCGACGCCGGGAAGCCGGAGAGCGAATACAAACGACTGGTTATC
 
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JMSF045D13+           ATCACATTGCACGCCCACCCACGTGCACGCAGAGACGGAGGCGTTCCACTGGACCCTGCC
JMSF051A13+           ATCACATCGCACGCCCACCCACGTGCACGCAGAGACGGAGGCGTTCCACTGGACCCTGCC
                      ____________________________________________________________
consensus             ATCACATTGCACGCCCACCCACGTGCACGCAGAGACGGAGGCGTTCCACTGGACCCTGCC
 
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JMSF045D13+           CTCGTGTGGGACCCTCGACAGGAAAGCAAGGAGTGCTTGCTTGTCCTGAGTTGGCTCCGA
JMSF051A13+           CTCGTGTGGGACCCTCGACAGGAAAGCAAGGAGTGCTTGCTTGTCCTGAGTTGGCTCCGA
                      ____________________________________________________________
consensus             CTCGTGTGGGACCCTCGACAGGAAAGCAAGGAGTGCTTGCTTGTCCTGAGTTGGCTCCGA
 
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JMSF045D13+           GTTGACGCGGTGGTGGTGACTCACCTGTAACGCCACCACCATAGCAAACCACAGAAGAAA
JMSF051A13+           GTTGACGCGGTGGTGGTGACTCACCTGTAACGCCACCACCATAGCAAACCACAGAAGAAA
JMSF010D08+                                                                GAAGAAA
                      ____________________________________________________________
consensus             GTTGACGCGGTGGTGGTGACTCACCTGTAACGCCACCACCATAGCAAACCACAGAAGAAA
 
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JMSF045D13+           CCAAGAATTCAAAATCGCCGCCATAATATTCTTCTTTTTGCACCAAAAACTCTACGCCAA
JMSF051A13+           CCAAGAATTCAAAATCGCCGCCATAATATTCTTCTTTTTGCACCAAAAACTCTACGCCAA
JMSF010D08+           CCAAGAATTCAAAATCGCCGCCATAATATTCTTCTTTTTGCACCAAAAACTCTACGCCAA
                      ____________________________________________________________
consensus             CCAAGAATTCAAAATCGCCGCCATAATATTCTTCTTTTTGCACCAAAAACTCTACGCCAA
 
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JMSF045D13+           AATTCTTATTTAATTCTTAAACAGCTGCACTTCTGGACTGATTCAAAACCCGGCCGCCGG
JMSF051A13+           AATTCTTATTTAATTCTTAAACAGCTGCACTTCTGGACTGATTCAAAACCCGGCCGCCGG
JMSF010D08+           AATTCTTATTTAATTCTTAAACAGCTGCACTTCTGGACTGATTCAAAACCCGGCCGCCGG
                      ____________________________________________________________
consensus             AATTCTTATTTAATTCTTAAACAGCTGCACTTCTGGACTGATTCAAAACCCGGCCGCCGG
 
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JMSF045D13+           CAAGGGTCCATGAGAGAGAGAGAAACGAATTTAGAGAGAGAGAGAGAGAGAATCTCGCTC
JMSF051A13+           CAAGGGTCCATGAGAGAGAGAGAAACGAATTTAGAGAGAGAGAGAGAGAGAATCTCGCTC
JMSF010D08+           CAAGGGTCCATGAGAGAGAGAGAAACGAATTTAGAGAGAGAGAGAGAGAGAATCTCGCTC
                      ____________________________________________________________
consensus             CAAGGGTCCATGAGAGAGAGAGAAACGAATTTAGAGAGAGAGAGAGAGAGAATCTCGCTC
 
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JMSF045D13+           TGCTCTCCGAAAGAGATAGAAG                                      
JMSF051A13+           TGCTCTCCGAAAGAGATAGAAG                                      
JMSF010D08+           TGCTCTCCGAAAGAGATAGAAGGCGGAGCAGAGTGTGGGAGAGACTTTGTTTTGTAGATC
                      ____________________________________________________________
consensus             TGCTCTCCGAAAGAGATAGAAGGCGGAGCAGAGTGTGGGAGAGACTTTGTTTTGTAGATC