Contig 000638:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010C08Sequence271000638 (4)738016036ref|XP_009630046.1|1e-04PREDICTED: magnesium transporter MRS2-11, chloroplastic isoform X1 [Nicotiana t
JMSF025H14Sequence614000638 (4)ref|XP_004251000.1|1e-14PREDICTED: magnesium transporter MRS2-11, chloroplastic [Solanum lycopersicum]761000638 (4)emb|CDP07003.1|1e-79unnamed protein product [Coffea canephora]
JMSF032I10Sequence695000638 (4)ref|XP_004251000.1|9e-55PREDICTED: magnesium transporter MRS2-11, chloroplastic [Solanum lycopersicum]712016138ref|XP_007016001.1|7e-21Magnesium transporter 10 isoform 1 [Theobroma cacao] gb|EOY33620.1| Magnesium tr

Alignment

This contig is upended


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rJMSF025H14-                           TGAGCACAGGCTTTAAGAAAAACATCATTGAGGCAAGGGATTG
                      ____________________________________________________________
consensus                              TGAGCACAGGCTTTAAGAAAAACATCATTGAGGCAAGGGATTG
 
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rJMSF025H14-          GTGAAAAGAAAGATAAACATATGCTCACTATGTTCCTTACTCACACGAGGTTCTAGATCC
                      ____________________________________________________________
consensus             GTGAAAAGAAAGATAAACATATGCTCACTATGTTCCTTACTCACACGAGGTTCTAGATCC
 
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rJMSF025H14-          CATAATCTCTGCTCCAGTCGTTGAATCCGTGAATGCAAGGCTGCTTCAACCACCTCAAGC
                      ____________________________________________________________
consensus             CATAATCTCTGCTCCAGTCGTTGAATCCGTGAATGCAAGGCTGCTTCAACCACCTCAAGC
 
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rJMSF025H14-          AAAAATGGCATTGAATGCCCTCCACTCAAGTTGTCAGGGTTTAGCCGAGGTAAGGGTGCA
                      ____________________________________________________________
consensus             AAAAATGGCATTGAATGCCCTCCACTCAAGTTGTCAGGGTTTAGCCGAGGTAAGGGTGCA
 
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rJMSF025H14-          CCAATGAAAGCTGTTCCTCCTTTACTGTTATAGTTGAATACAAGGACACTTTCCTGCATT
JMSF032I10+                              CTTTACTGTTATAGTTGAATACAAGGACACTTTCCTGCATT
                      ____________________________________________________________
consensus             CCAATGAAAGCTGTTCCTCCTTTACTGTTATAGTTGAATACAAGGACACTTTCCTGCATT
 
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rJMSF025H14-          ATTATGGCTCGTAAAGAGCCCAGATTCAATAGGATTGCATGTTCACGGACCAGTAAAGAA
JMSF032I10+           ATTATGGCTCGTAAAGAGCCCAGATTCAATAGGATTGCATGTTCACGGACCAGTAAAGAA
                      ____________________________________________________________
consensus             ATTATGGCTCGTAAAGAGCCCAGATTCAATAGGATTGCATGTTCACGGACCAGTAAAGAA
 
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rJMSF025H14-          GGCATTGAATTTGTCAACCACAATGACGGATCAACACTCCGGATATCTCGAGGACGAAGA
JMSF032I10+           GGCATTGAATTTGTCAACCACAATGACGGATCAACACTCCGGATATCTCGAGGACGAAGA
                      ____________________________________________________________
consensus             GGCATTGAATTTGTCAACCACAATGACGGATCAACACTCCGGATATCTCGAGGACGAAGA
 
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rJMSF025H14-          CCGCTCGACTTCAGCAAGTTTCTTCTATTTATTTTTCTTGTTGAGACCGTCCTATTTGAC
JMSF032I10+           CCGCTCGACTTCAGCAAGTTTCTTCTATTTATTTTTCTTGTTGAGACCGTCCTATTTGAC
JMSF025H14+                    TTCAGCAAGTTTNTTNTATTTATTTTTNTNGTTGAGACCGTCNTATTTGAC
                      ____________________________________________________________
consensus             CCGCTCGACTTCAGCAAGTTTCTTCTATTTATTTTTCTTGTTGAGACCGTCCTATTTGAC
 
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rJMSF025H14-          TTTACTTCCAGTACCTCGTAAACCGGTTCGCGGATCCCAAGGGACAGAGAATCGCCGGCG
JMSF032I10+           TTTACTTCCAGTACCTCGTAAACCGGTTCGCGGATCCCAAGGGACAGAGAATCGCCGGCG
JMSF025H14+           TTTANTTCCAGTACCTNGTAAACCGGTTCGCGGATCCCAAGGGACAGAGAATCGCCGGCG
                      ____________________________________________________________
consensus             TTTACTTCCAGTACCTCGTAAACCGGTTCGCGGATCCCAAGGGACAGAGAATCGCCGGCG
 
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rJMSF025H14-          ACAACCTTCCGCTGACCGACCGAAGCACTGGAAAACTCCTTCTGAGCCGCCGCTTCAGCC
JMSF032I10+           ACAACCTTCCGCTGACCGACCGAAGCACTGGAAAACTCCTTCTGAGCCGCCGCTTCAGCC
JMSF025H14+           ACAACCTTCCGCTGACCGACCGAAGCACTGGAAAACTCCTTNTGAGCCGCCGCTTCAGCC
                      ____________________________________________________________
consensus             ACAACCTTCCGCTGACCGACCGAAGCACTGGAAAACTCCTTCTGAGCCGCCGCTTCAGCC
 
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rJMSF025H14-          AATTCCTCTTGCGGATCAACCTTACTATCATCCCCGCTAATCTCCCGATCAACCAAAACC
JMSF032I10+           AATTCCTCTTGCGGATCAACCTTACTATCATCCCCGCTAATCTCCCGATCAACCAAAACC
JMSF025H14+           AATTCCTCTTGCGGATCAACCTTACTATCATCCCCGCTAATCTCCCGATCAACCAAAACC
                      ____________________________________________________________
consensus             AATTCCTCTTGCGGATCAACCTTACTATCATCCCCGCTAATCTCCCGATCAACCAAAACC
 
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rJMSF025H14-          TCCTGCTCGGGCTCCACCCTCGACTTCGTCAAGCACCTGACAACATCCAGGGTCCGCACC
JMSF032I10+           TCCTGCTCGGGCTCCACCCTCGACTTCGTCAAGCACCTGACAACATCCAGGGTCCGCACC
JMSF025H14+           TCCTGCTCGGGCTCCACCCTCGACTTCGTCAAGCACCTGACAACATCCAGGGTCCGCACC
                      ____________________________________________________________
consensus             TCCTGCTCGGGCTCCACCCTCGACTTCGTCAAGCACCTGACAACATCCAGGGTCCGCACC
 
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rJMSF025H14-          TTCACCGAGACTCTGCGGCCCCTATGCAACGACGGCAAGCCCGAGATTCTGAACGGG   
JMSF032I10+           TTCACCGAGACTCTGCGGCCCCTATGCAACGACGGCAAGCCCGAGATTCTGAACGGGCGA
JMSF025H14+           TTCACCGAGACTCTGCGGCCCCTATGCAACGACGGCAAGCCCGAGATTCTGAACGGGAGA
                      ____________________________________________________________
consensus             TTCACCGAGACTCTGCGGCCCCTATGCAACGACGGCAAGCCCGAGATTCTGAACGGGCGA
 
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JMSF032I10+           AGGACGGGGCATTCGCCGGACAAAACAATCCGGAGCTGCGGCGATCGGACAGGCAATTGG
JMSF025H14+           AGGACGGGGCATTCGCCGGACAAAACAATCCGGAGCTGCGGCGATCGGACAGGCAATTGG
JMSF010C08+                                        CCGGAGCTGCGGCGATCGGACAGGCAATTGG
                      ____________________________________________________________
consensus             AGGACGGGGCATTCGCCGGACAAAACAATCCGGAGCTGCGGCGATCGGACAGGCAATTGG
 
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JMSF032I10+           AGGAGATACGGAGCTTGAAATGCGGCGGCCATTGTCGGAGGACATGTGAGAGAAGTGAAA
JMSF025H14+           AGGAGATACGGAGCTTGAAATGCGGCGGCCATTGTCGGAGGACATGTGAGAGAAGTGAAA
JMSF010C08+           AGGAGATACGGAGCTTGAAATGCGGCGGCCATTGTCGGAGGACATGTGAGAGAAGTGAAA
                      ____________________________________________________________
consensus             AGGAGATACGGAGCTTGAAATGCGGCGGCCATTGTCGGAGGACATGTGAGAGAAGTGAAA
 
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JMSF032I10+           TTTTGATAAATAGTAATATGCAGAAATGCAGAATCAAGTCTGAGATAGCCAAT       
JMSF025H14+           TTTTGATAAATAGTAATATGCAGAAATGCAGAATCAAGTCTGAGATAGCCAAT       
JMSF010C08+           TTTTGATAAATAGTAATATGCAGAAATGCAGAATCAAGTCTGAGATAGCCAATGGAGAAA
                      ____________________________________________________________
consensus             TTTTGATAAATAGTAATATGCAGAAATGCAGAATCAAGTCTGAGATAGCCAATGGAGAAA
 
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JMSF010C08+           TGAAATTATTGGCGAGTATTTATAGGTTAGAGGTTGTGAGGTGAAGTAGGCGATGAAGCT
                      ____________________________________________________________
consensus             TGAAATTATTGGCGAGTATTTATAGGTTAGAGGTTGTGAGGTGAAGTAGGCGATGAAGCT
 
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JMSF010C08+           GGTGGTTGTGGATGCTTTGGCGAAGAAACGGGAGATAGTTTAGCTTCTGGATTTCTGGTC
                      ____________________________________________________________
consensus             GGTGGTTGTGGATGCTTTGGCGAAGAAACGGGAGATAGTTTAGCTTCTGGATTTCTGGTC