Contig 000635:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF010A04-                                                       AACTACATTTCACAA
                      ____________________________________________________________
consensus                                                          AACTACATTTCACAA
 
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rJMSF010A04-          TTCAAGTCCAAAGATGATGATGATGATAAGGATAACATAAAAACACAACCTTTATTATTC
                      ____________________________________________________________
consensus             TTCAAGTCCAAAGATGATGATGATGATAAGGATAACATAAAAACACAACCTTTATTATTC
 
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rJMSF010A04-          TGCTTTCCTATTTCATCCTCAACTCATTCACTCACTCCAGTACTTCTCCTCTTCACTATC
                      ____________________________________________________________
consensus             TGCTTTCCTATTTCATCCTCAACTCATTCACTCACTCCAGTACTTCTCCTCTTCACTATC
 
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rJMSF010A04-          TTTATCGTCTTCTCTCTGCTCATCATCCGCCATTAAACTATTCTTGAATTTCTTTACATC
                      ____________________________________________________________
consensus             TTTATCGTCTTCTCTCTGCTCATCATCCGCCATTAAACTATTCTTGAATTTCTTTACATC
 
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rJMSF010A04-          CTCCACGGCCGCTGTCCTAAACAACCCTATATCAACTGCTCCAGACACCATGTGGTACCC
                      ____________________________________________________________
consensus             CTCCACGGCCGCTGTCCTAAACAACCCTATATCAACTGCTCCAGACACCATGTGGTACCC
 
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rJMSF010A04-          TCTCTGCTTCAAATTCTCTGGTTTATCATGCGGCATTGCGAATCCCGACAAGTAGGCTCC
                      ____________________________________________________________
consensus             TCTCTGCTTCAAATTCTCTGGTTTATCATGCGGCATTGCGAATCCCGACAAGTAGGCTCC
 
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rJMSF010A04-          TTTTCCTTCGCCGGGATTAGTCTCCAGCACCGCCTTCTCCGCCGCCCTCAGCACTTCCTT
                      ____________________________________________________________
consensus             TTTTCCTTCGCCGGGATTAGTCTCCAGCACCGCCTTCTCCGCCGCCCTCAGCACTTCCTT
 
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rJMSF010A04-          CACTTTCTTGTGACCCGGATCCCACAGGTACCCCAGGCTAGCGCTCAGATCTAATGGTCC
                      ____________________________________________________________
consensus             CACTTTCTTGTGACCCGGATCCCACAGGTACCCCAGGCTAGCGCTCAGATCTAATGGTCC
 
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rJMSF010A04-          CATTTGAATGCAATCCACGCCCTCCACGCCCGCGATCTCATCGATTTTCTTCACTCCCTC
                      ____________________________________________________________
consensus             CATTTGAATGCAATCCACGCCCTCCACGCCCGCGATCTCATCGATTTTCTTCACTCCCTC
 
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rJMSF010A04-          CTTGCATTCTACCTGGCACATTATCAGCAGCTCCTCCTCGTAATTGCTGAGATACCCTGC
JMFS080F02+                                                                    TGC
                      ____________________________________________________________
consensus             CTTGCATTCTACCTGGCACATTATCAGCAGCTCCTCCTCGTAATTGCTGAGATACCCTGC
 
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rJMSF010A04-          ATCGATTCCGTAATCCGAAGCTCTAACCACCGTGTGCGCTGATCCGCGGACTCCGTTGGG
JMFS080F02+           ATCGATTCCGTAATCCGAAGCTCTAACCACCGTGTGCGCTGATCCGCGGACTCCGTTGGG
JMFS075G12+                  CCGTAATCCGAAGCTCTAACCACCGTGTGCGCTGATCCGCGGACTCCGTTGGG
                      ____________________________________________________________
consensus             ATCGATTCCGTAATCCGAAGCTCTAACCACCGTGTGCGCTGATCCGCGGACTCCGTTGGG
 
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rJMSF010A04-          AGGAAAGCGGCAGTAAGACACGGCTTTTCGGGCGTCTTTGGGGCTATCGATCATGGGAAA
JMFS080F02+           AGGAAAGCGGCAGTAAGACACGGCTTTTCGGGCGTCTTTGGGGCTATCGATCATGGGAAA
JMFS075G12+           AGGAAAGCGGCAGTAAGACACGGCTTTTCGGGCGTCTTTGGGGCTATCGATCATGGGAAA
                      ____________________________________________________________
consensus             AGGAAAGCGGCAGTAAGACACGGCTTTTCGGGCGTCTTTGGGGCTATCGATCATGGGAAA
 
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JMFS080F02+           CATGATCCCCTGCGGGCCGAGATCGAGGGCCTTTTTAGCCCAGACGTCAGACGATTCGGG
JMFS075G12+           CATGATCCCCTGCGGGCCGAGATCGAGGGCCTTTTTAGCCCAGACGTCAGACGATTCGGG
                      ____________________________________________________________
consensus             CATGATCCCCTGCGGGCCGAGATCGAGGGCCTTTTTAGCCCAGACGTCAGACGATTCGGG
 
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JMFS080F02+           GATGCGGAGGATAGCCGGAGTACGAGTAGCGGCGAGGGCGTGAAGGCAAGGGAGAGCGTC
JMFS075G12+           GATGCGGAGGATAGCCGGAGTACGAGTAGCGGCGAGGGCGTGAAGGCAAGGGAGAGCGTC
                      ____________________________________________________________
consensus             GATGCGGAGGATAGCCGGAGTACGAGTAGCGGCGAGGGCGTGAAGGCAAGGGAGAGCGTC
 
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JMFS080F02+           AGATATGCCGCCGTGGCCGTGCTCCATGTCGACCACGGCGAAGTCGTAGCCGGCGAGGCC
JMFS075G12+           AGATATGCCGCCGTGGCCGTGCTCCATGTCGACCACGGCGAAGTCGTAGCCGGCGAGGCC
                      ____________________________________________________________
consensus             AGATATGCCGCCGTGGCCGTGCTCCATGTCGACCACGGCGAAGTCGTAGCCGGCGAGGCC
 
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JMFS080F02+           GGCAATCTCAGCGAGAGTCGGGGAGAAACTGAGGAGGAAAATCCCGTAAAGGGTCTCGCC
JMFS075G12+           GGCAATCTCAGCGAGAGTCGGGGAGAAACTGAGGAGGAAAATCCCGTAAAGGGTCTCGCC
                      ____________________________________________________________
consensus             GGCAATCTCAGCGAGAGTCGGGGAGAAACTGAGGAGGAAAATCCCGTAAAGGGTCTCGCC
 
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JMFS080F02+           ATTCCTGAGGCGGGCTTTCAGGGTCTGCGGGGCGGTGACAGGGGTAGCGGCGGCGGCGGC
JMFS075G12+           ATTCCTGAGGCGGGCTTTCAGGGTCTGCGGGGCGGTGACAGGGGTAGCGGCGGCGGCGGC
JMSF010A04+                                         GGCGGTGACAGGGGTAGCGGCGGCGGCGGC
                      ____________________________________________________________
consensus             ATTCCTGAGGCGGGCTTTCAGGGTCTGCGGGGCGGTGACAGGGGTAGCGGCGGCGGCGGC
 
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JMFS080F02+           GGAGGATTGAAGCAGAGAAAAGTGTCGTTTGAGATTGGAGTTTAGGGTTGTAAGGGATAA
JMFS075G12+           GGAGGATTGAAGCAGAGAAAAGTGTCGTTTGAGATTGGAGTTTAGGGTTGTAAGGGATAA
JMSF010A04+           GGAGGATTGAAGCAGAGAAAAGTGTCGTTTGAGATTGGAGTTTAGGGTTGTAAGGGATAA
                      ____________________________________________________________
consensus             GGAGGATTGAAGCAGAGAAAAGTGTCGTTTGAGATTGGAGTTTAGGGTTGTAAGGGATAA
 
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JMFS080F02+           GGATTTGGGTTTTGAAGGAGTAGTAAATGGTAGAAATGAAGGAGTTGGAGAAGAAGAAAT
JMFS075G12+           GGATTTGGGTTTTGAAGGAGTAGTAAATGGTAGAAATGAAGGAGTTGGAGAAGAAGAAAT
JMSF010A04+           GGATTTGGGTTTTGAAGGAGTAGTAAATGGTAGAAATGAAGGAGTTGGAGAAGAAGAAAT
                      ____________________________________________________________
consensus             GGATTTGGGTTTTGAAGGAGTAGTAAATGGTAGAAATGAAGGAGTTGGAGAAGAAGAAAT
 
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JMFS080F02+           GAATGACTTTTTGAGAGTAGAGAGAGAAAATGTTGAAGAAGAAGAAAGCGTAGCCATTGT
JMFS075G12+           GAATGACTTTTTGAGAGTAGAGAGAGAAAATGTTGAAGAAGAAGAAAGCGTAGCCATTGT
JMSF010A04+           GAATGACTTTTTGAGAGTAGAGAGAGAAAATGTTGAAGAAGAAGAAAGCGTAGCCATTGT
                      ____________________________________________________________
consensus             GAATGACTTTTTGAGAGTAGAGAGAGAAAATGTTGAAGAAGAAGAAAGCGTAGCCATTGT
 
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JMFS080F02+           TCAAGTTTTGGTGGTCG                                           
JMFS075G12+           TCAAGTTTTGGTGGTCGGCGAGCAGTGGGCAGTG                          
JMSF010A04+           TCAAGTTTTGGTGGTCGGCGAGCAGTGGGCAGTGGAGAGTAGACGAAGAAAATGGAATCC
                      ____________________________________________________________
consensus             TCAAGTTTTGGTGGTCGGCGAGCAGTGGGCAGTGGAGAGTAGACGAAGAAAATGGAATCC