Contig 000633:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009L05Sequence391000633 (2)ref|XP_009615945.1|2e-13PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nicotiana tomentosifo706002793 (3)ref|XP_009768583.1|5e-11PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nicotiana sylvestris]
JMSF012I12Sequence492000633 (2)ref|XP_009615945.1|2e-40PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nicotiana tomentosifo748002793 (3)ref|XP_007209892.1|2e-05hypothetical protein PRUPE_ppa004048mg [Prunus persica] gb|EMJ11091.1| hypotheti

Alignment

This contig is upended


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JMSF012I12+                                                TCATCGGTCAAATGAACTACCTC
                      ____________________________________________________________
consensus                                                  TCATCGGTCAAATGAACTACCTC
 
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JMSF012I12+           CAAAGGTACGTTTACCTGATCACAAACAGCTTTTGCATATTTCAGATCCTCCTCCCATGG
                      ____________________________________________________________
consensus             CAAAGGTACGTTTACCTGATCACAAACAGCTTTTGCATATTTCAGATCCTCCTCCCATGG
 
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JMSF012I12+           GCACTCTGACCAAAAGTTCTCAAAGTCTTCCTGGAACCATATTTTGAGATAGAAAGCGGT
JMSF009L05+                                        CCTGGAACCATATTTTGAGATAGAAAGCGGT
                      ____________________________________________________________
consensus             GCACTCTGACCAAAAGTTCTCAAAGTCTTCCTGGAACCATATTTTGAGATAGAAAGCGGT
 
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JMSF012I12+           GCAGGAATGTCCAGCGGCGTGGAGGAGGCGGAGAGACACGCTGCTATCGACGCCACCGCT
JMSF009L05+           GCAGGAATGTCCAGCGGCGTGGAGGAGGCGGAGAGACACGCTGCTATCGACGCCACCGCT
                      ____________________________________________________________
consensus             GCAGGAATGTCCAGCGGCGTGGAGGAGGCGGAGAGACACGCTGCTATCGACGCCACCGCT
 
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JMSF012I12+           GACCAAAACGGCCACCTTGAGAGGCTTCTTCTCCGGCAGCGAGCAGGAGAGGTATTTAGG
JMSF009L05+           GACCAAAACGGCCACCTTGAGAGGCTTCTTCTCCGGCAGCGAGCAGGAGAGGTATTTAGG
                      ____________________________________________________________
consensus             GACCAAAACGGCCACCTTGAGAGGCTTCTTCTCCGGCAGCGAGCAGGAGAGGTATTTAGG
 
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JMSF012I12+           ATCGATAACATCATCTGTTCTCGGCTGCGGCGGCGCGTTGGTGGAAACTGCGTAGGACGA
JMSF009L05+           ATCGATAACATCATCTGTTCTCGGCTGCGGCGGCGCGTTGGTGGAAACTGCGTAGGACGA
                      ____________________________________________________________
consensus             ATCGATAACATCATCTGTTCTCGGCTGCGGCGGCGCGTTGGTGGAAACTGCGTAGGACGA
 
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JMSF012I12+           AGAGACGGATAGTGGTCGTAGACGGAGCAGTCTCCCCTTAGCGTGCGAACGAGAGAGTGT
JMSF009L05+           AGAGACGGATAGTGGTCGTAGACGGAGCAGTCTCCCCTTAGCGTGCGAACGAGAGAGTGT
                      ____________________________________________________________
consensus             AGAGACGGATAGTGGTCGTAGACGGAGCAGTCTCCCCTTAGCGTGCGAACGAGAGAGTGT
 
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JMSF012I12+           GAGAGAAAGAGGAGCTCGCAGAGAAGAGAGAGATGGGAATTGGTTGAGAGAAAGAGTGGC
JMSF009L05+           GAGAGAAAGAGGAGCTCGCAGAGAAGAGAGAGATGGGAATTGGTTGAGAGAAAGAGTGGC
                      ____________________________________________________________
consensus             GAGAGAAAGAGGAGCTCGCAGAGAAGAGAGAGATGGGAATTGGTTGAGAGAAAGAGTGGC
 
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JMSF012I12+           TATGGCGGATCCCGCCCTCAGTCTCAGCATCGTTCTCGATGGATTTTG            
JMSF009L05+           TATGGCGGATCCCGCCCTCAGTCTCAGCATCGTTCTCGATGGATTTTGGGTTGGGAGATC
                      ____________________________________________________________
consensus             TATGGCGGATCCCGCCCTCAGTCTCAGCATCGTTCTCGATGGATTTTGGGTTGGGAGATC