Contig 000632:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS163H06Sequence621000632 (7)ref|XP_009777669.1|4e-09PREDICTED: probable ubiquitin-like-specific protease 2B isoform X3 [Nicotiana s
JMFS167E03Sequence620000632 (7)
JMSF002B17Sequence224000632 (7)751003001 (8)emb|CAN78777.1|7e-15hypothetical protein VITISV_029751 [Vitis vinifera]
JMSF009J11Sequence330000632 (7)693003001 (8)emb|CDP19104.1|6e-12unnamed protein product [Coffea canephora]
JMSF017A16Sequence348000632 (7)764003001 (8)emb|CAN78777.1|3e-14hypothetical protein VITISV_029751 [Vitis vinifera]
JMSF037A08Sequence471000632 (7)665003001 (8)emb|CDP19104.1|9e-10unnamed protein product [Coffea canephora]
JMSF039K19Sequence422000632 (7)315003001 (8)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+                    AGTATGTTTCCCTATAATAGATGAAATCAGGATGGAACACAATTGCCATGT
                      ____________________________________________________________
consensus                      AGTATGTTTCCCTATAATAGATGAAATCAGGATGGAACACAATTGCCATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           TTTCACCCATTTCCCAGTGACCCTGGCAATTTTCTGATGATGGACTATCCTCACAGAGAT
                      ____________________________________________________________
consensus             TTTCACCCATTTCCCAGTGACCCTGGCAATTTTCTGATGATGGACTATCCTCACAGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           CATGGTTAGCTGGCCTAGCAGATGGGGTTGGACTATTCACATTCAAGCTCTCATCTGTGT
                      ____________________________________________________________
consensus             CATGGTTAGCTGGCCTAGCAGATGGGGTTGGACTATTCACATTCAAGCTCTCATCTGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           CTGAAACTGCATCAACTGAGTCATCGTTGGATTGAGATTCTCTGAAGGCATGTTGGTTGT
JMSF039K19+                                                    CTGAAGGCATGTTGGTTGT
                      ____________________________________________________________
consensus             CTGAAACTGCATCAACTGAGTCATCGTTGGATTGAGATTCTCTGAAGGCATGTTGGTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           CTTCAGGAGAAGCTGTTCCAGGGCTAGAACTGCTTTCCAGGCTGGGATTAAATCTTCCAG
JMSF039K19+           NTTCAGGAGAAGCTGTTCCAGGGCTAGAACTGCTTTCCAGGCTGGGATTAAATCTTCCAG
JMSF017A16+                                                                CTTCCAG
                      ____________________________________________________________
consensus             CTTCAGGAGAAGCTGTTCCAGGGCTAGAACTGCTTTCCAGGCTGGGATTAAATCTTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           ACAATACATTAGGTCTTACATGATGAAATAGTTCTTGATTTGTTGAATTCATTTGCTTGG
JMSF039K19+           ACAATACATTAGGTCTTACATGATGAAATAGTTCTTGATTTGTTGAATTCATTNGCTTGG
JMSF017A16+           ACAATACATTAGGTCTTACATGATGAAATAGTTCTTGATTTGTTGAATTCATTTGCTTGG
JMFS167E03+                             CATGATGAAATAGTTCTTGATTTGTTGAATTCATTTGCTTGG
JMSF037A08+                      GGTCTTACATGATGAAATAGTTCTNGATTTGTTGANTTCNTTTGCTTGG
                      ____________________________________________________________
consensus             ACAATACATTAGGTCTTACATGATGAAATAGTTCTTGATTTGTTGAATTCATTTGCTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           CATCATCCAACCTAGACATCCCTTCAATATTGAAATATTCATTTTCTAAGACTCTGTGAA
JMSF039K19+           CATCATCCAACCTAGACATCCNTTCAATATTGAAATATTCATTTTTTAAGACTCNGTGAA
JMSF017A16+           CATCATCCAACCTAGACATCCCTTCAATATTGAAATATTCATTTTCTAAGACTCTGTGAA
JMFS167E03+           CATCATCCAACCTAGACATCCCTTCAATATTGAAATATTCATTTTCTAAGACTCTGTGAA
JMSF037A08+           CATCATCCAACCTAGACATCCCTTCAATANNGAAATATTCATTTTCTANGACTCTGTGAA
                      ____________________________________________________________
consensus             CATCATCCAACCTAGACATCCCTTCAATATTGAAATATTCATTTTCTAAGACTCTGTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           TGTTGAGAGCTTCGGATGCTACGGATTCTGAGCAAACACGAGTGACAACCATATTCGGGA
JMSF039K19+           TGNNGAGAGCTTCGGATGTTACGGATTNTGAGCAAACACGAGNGACAACCATATTCGTGA
JMSF017A16+           TGTTGAGAGCTTCGGATGCTACGGATTCTGAGCAAACACGAGTGACAACCATATTCGGGA
JMFS167E03+           TGTTGAGAGCTTCGGATGCTACGGATTCTGAGCAAACACGAGTGACAACCATATTCGGGA
JMSF037A08+           TGTTGAGAGCTTCGGATGTTACGGNTTCTGAGCAAACACGAGTGACAACCATATTCGGGA
JMSF009J11+                                        GAGCAAACACGAGTGACANCCATATTCGGGA
                      ____________________________________________________________
consensus             TGTTGAGAGCTTCGGATGCTACGGATTCTGAGCAAACACGAGTGACAACCATATTCGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           GCTCCTCTTCTTTGAAACCGAACGCATCGAAAGACTTGGCAGAATTTTCCATTCAAACCC
JMSF039K19+           GCTCNTNTTCTNTGAAACCGAACGCATCGAAAGACTTGGCAGAATTTTCCATTCAAACCC
JMSF017A16+           GCTCCTCTTCTTTGAAACCGAACGCATCGAAAGACTTGGCAGAATTTTCCATTCAAACCC
JMFS167E03+           GCTCCTCTTCTTTGAAACCGAACGCATCGAAAGACTTGGCAGAATTTTCCATTCAAACCC
JMSF037A08+           GNTCCTNTTCTTTGAAACCGAACGCATCGAAAGACTTGGCAGAATTTTCCATTCAAACCC
JMSF002B17+                                                             ATTCAAACCC
JMSF009J11+           GCTCCTCTTCTTTGAAACCGAACGCATCGAAAGACTTGGCAGAATTTTCCATTCAAACCC
                      ____________________________________________________________
consensus             GCTCCTCTTCTTTGAAACCGAACGCATCGAAAGACTTGGCAGAATTTTCCATTCAAACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           CGCAGGAGAACACTTTTGCGGAGATCGAAAGCGAGTAAGGTTTGGACGATGTTGAATACG
JMSF039K19+           CGCAGGAGAACACTTTTGNGGAGATCGAAAGCGAGTAANGTTTGGACGANGTNGAATACG
JMSF017A16+           CGCAGGAGAACACTTTTGCGGAGATCGAAAGCGAGTAAGGTTTGGACGATGTTGAATACG
JMFS167E03+           CGCAGGAGAACACTTTTGCGGAGATCGAAAGCGAGTAAGGTTTGGACGATGTTGAATACG
JMSF037A08+           CGCAGGAGAACACTTTNGCGGAGATNGAANGCGAGTAAGGTTTGGACGATGTTGAATNCG
JMSF002B17+           CGCAGGAGAACACTTTTGCGGAGATCGAAAGCGAGTAAGGTTTGGACGATGTTGAATACG
JMSF009J11+           CGCAGGAGAACACTTTTGCGGAGATCGAAAGCGAGTAAGGTTTGGACGATGTTGAATACG
                      ____________________________________________________________
consensus             CGCAGGAGAACACTTTTGCGGAGATCGAAAGCGAGTAAGGTTTGGACGATGTTGAATACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS163H06+           ATCTCAATTTTGACGAATCAGTAGATCAAA                              
JMSF039K19+           ATCTCAATTTNGACGAATCAGTAGATCAAATTNTAGGGT                     
JMSF017A16+           ATCTCAATTTTGACGAATCAGTAGATCAAATTCTAGGGTT                    
JMFS167E03+           ATCTCAATTTTGACGAATCAGTAGATCAAATTCTAGGGTTGCAGCACGTATATTGTCCCA
JMSF037A08+           ATNTCAATTTTGACGAATCAGTAGATCAAATTCTAGGGTTGCAGCACGTATATTGTCCCA
JMSF002B17+           ATCTCAATTTTGACGAATCAGTAGATCAAATTCTAGGGTTGCAGCACGTATATTGTCCCA
JMSF009J11+           ATCTCAATTTTGACGAATCAGTAGATCAAATTCTAGGGTTGCAGCACGTATATTGTCCCA
                      ____________________________________________________________
consensus             ATCTCAATTTTGACGAATCAGTAGATCAAATTCTAGGGTTGCAGCACGTATATTGTCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS167E03+           TGCTCTCTTTAATAAAGGGCGGGTTAAATGAGCAGAGAGGATTGATTGATCGATCGAGCG
JMSF037A08+           TGCTCTCTNTAATAAAGGGCGGGTTAAATGAGCAGAGAGGATTGATTGATCGATCGAGCG
JMSF002B17+           TGCTCTCTTTAATAAAGGGCGGGTTAAATGAGCAGAGAGGATTGATTGATCGATCGAGCG
JMSF009J11+           TGCTCTCTTTAATAAAGGGCGGGTTAAATGAGCAGAGAGGATTGATTGATCGATCGAGCG
                      ____________________________________________________________
consensus             TGCTCTCTTTAATAAAGGGCGGGTTAAATGAGCAGAGAGGATTGATTGATCGATCGAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS167E03+           CGTGGAGTTTCCAAGAGATTTCTA                                    
JMSF037A08+           CGNGGAGTTTCCAAGAGATTTCTANCGTTTTCCTAAATGGGCGAGAATACGGAATACCCC
JMSF002B17+           CGTGGAGTTTCCAAGAGATTTCTA                                    
JMSF009J11+           CGTGGAGTTTCCAAGAGATTTCTA-TGTTTTCCTAAATGGGCGAGAATACGGAATACCCC
                      ____________________________________________________________
consensus             CGTGGAGTTTCCAAGAGATTTCTANTGTTTTCCTAAATGGGCGAGAATACGGAATACCCC