Contig 000624:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF034P21+                                                           GGATACGGTACC
                      ____________________________________________________________
consensus                                                             GGATACGGTACC
 
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JMSF034P21+           ATCAACAAAGCAATGATAGAATGCATCCGTCACGCCCTCTCCAACAGCCTCAAACGTTGC
                      ____________________________________________________________
consensus             ATCAACAAAGCAATGATAGAATGCATCCGTCACGCCCTCTCCAACAGCCTCAAACGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034P21+           AATCAAGGGGGCAAAGAACCCGTATCCTAACCCACCCAAAAGGCTTCCAAGAATTGCTAT
                      ____________________________________________________________
consensus             AATCAAGGGGGCAAAGAACCCGTATCCTAACCCACCCAAAAGGCTTCCAAGAATTGCTAT
 
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JMSF034P21+           GACCGGCCAAAGAATCAAAGGTAGTGGCAATAACACCAGCACTGCACTCTTTAAAACCCA
                      ____________________________________________________________
consensus             GACCGGCCAAAGAATCAAAGGTAGTGGCAATAACACCAGCACTGCACTCTTTAAAACCCA
 
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JMSF034P21+           CCCAAGCCTTTTGCTCCTTGCCACACAGTAGTAGGTCCAAATAAAATGAGCCGGCCAAAG
                      ____________________________________________________________
consensus             CCCAAGCCTTTTGCTCCTTGCCACACAGTAGTAGGTCCAAATAAAATGAGCCGGCCAAAG
 
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JMSF034P21+           CCCAACCACAATTGCAGAATTTCCGATAACAATGACGCCTAATACAATGGGGCCAGTGAT
JMSF008H15+                                                     TACAATGGGGCCAGTGAT
                      ____________________________________________________________
consensus             CCCAACCACAATTGCAGAATTTCCGATAACAATGACGCCTAATACAATGGGGCCAGTGAT
 
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JMSF034P21+           TAACCCTTTAAGACAGCCAAGAGTAAAGAGCAAGAAGAAAAAAGGAAGGAAGGAGACAAA
JMSF008H15+           TAACCCTTTAAGACAGCCAAGAGTAAAGAGCAAGAAGAAAAAAGGAAGGAAGGAGACAAA
                      ____________________________________________________________
consensus             TAACCCTTTAAGACAGCCAAGAGTAAAGAGCAAGAAGAAAAAAGGAAGGAAGGAGACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034P21+           GCTCCAGAGCTTGGCGATGAACCCTACCGGCACTTCCATGATAAGCCGGCGGTGTGAAAA
JMSF008H15+           GCTCCAGAGCTTGGCGATGAACCCTACCGGCACTTCCATGATAAGCCGGCGGTGTGAAAA
                      ____________________________________________________________
consensus             GCTCCAGAGCTTGGCGATGAACCCTACCGGCACTTCCATGATAAGCCGGCGGTGTGAAAA
 
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JMSF034P21+           GTGGTAAAGACTAAAAGTAAAGTCGAAGAAAACGGAAGGATCGGAGAGAATGGATTTCCT
JMSF008H15+           GTGGTAAAGACTAAAAGTAAAGTCGAAGAAAACGGAAGGATCGGAGAGAATGGATTTCCT
                      ____________________________________________________________
consensus             GTGGTAAAGACTAAAAGTAAAGTCGAAGAAAACGGAAGGATCGGAGAGAATGGATTTCCT
 
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JMSF034P21+           TCCGCCGGAGAAGAAAAGAAGTGTGAGTGAGGTGTGTTCTGGTTTTCGATAGTTGTTACT
JMSF008H15+           TCCGCCGGAGAAGAAAAGAAGTGTGAGTGAGGTGTGTTCTGGTTTTCGATAGTTGTTACT
                      ____________________________________________________________
consensus             TCCGCCGGAGAAGAAAAGAAGTGTGAGTGAGGTGTGTTCTGGTTTTCGATAGTTGTTACT
 
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JMSF034P21+           TCATGCGGTGAAGGTATGGGCGGGGCGGGGCGGAGCTGTCACCTTACGTGGCGGAGCGAT
JMSF008H15+           TCATGCGGTGAAGGTATGGGCGGGGCGGGGCGGAGCTGTCACCTTACGTGGCGGAGCGAT
                      ____________________________________________________________
consensus             TCATGCGGTGAAGGTATGGGCGGGGCGGGGCGGAGCTGTCACCTTACGTGGCGGAGCGAT
 
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JMSF034P21+           GGTGGTCCTCTGCCACGCGGCTGCAGTAACCGCCCTTGAAGCGTGAGATTCCCGCTTACC
JMSF008H15+           GGTGGTCCTCTGCCACGCGGCTGCAGTAACCGCCCTTGAAGCGTGAGATTCCCGCTTACC
                      ____________________________________________________________
consensus             GGTGGTCCTCTGCCACGCGGCTGCAGTAACCGCCCTTGAAGCGTGAGATTCCCGCTTACC