Contig 000618:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M12Sequence578000618 (6)ref|XP_009615972.1|217PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]497002592 (8)gb|KJB62679.1|5e-30hypothetical protein B456_009G429700 [Gossypium raimondii]
JMFF014O12Sequence481000618 (6)ref|XP_009615972.1|167PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]830002592 (8)emb|CDP14941.1|1e-92unnamed protein product [Coffea canephora]
JMFF024B08Sequence411000618 (6)ref|XP_009615972.1|99.4PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]680002592 (8)emb|CDP14941.1|1e-64unnamed protein product [Coffea canephora]
JMSF008C21Sequence344000618 (6)ref|XP_009615972.1|99.0PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]802002592 (8)emb|CDP14941.1|8e-102unnamed protein product [Coffea canephora]
JMSF009C12Sequence328000618 (6)ref|XP_009615972.1|103PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]783002592 (8)emb|CDP14941.1|6e-88unnamed protein product [Coffea canephora]
JMSF045E04Sequence788000618 (6)ref|XP_009615972.1|303PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis]759002592 (8)emb|CDP14941.1|5e-88unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045E04+ TTAGGCATG
                      ____________________________________________________________
consensus TTAGGCATG
 
. : . : . : . : . : . :
JMSF045E04+ GAAGAAAACGTAGTAAAATTGTTGTTTTTCAGACAAGATAAAGATATGGCGGCTGAGCCG
                      ____________________________________________________________
consensus GAAGAAAACGTAGTAAAATTGTTGTTTTTCAGACAAGATAAAGATATGGCGGCTGAGCCG
 
. : . : . : . : . : . :
JMSF045E04+ TCGATATTAGCCGCAAATGTCCCGACAGGGACGCCTTGGGCTTCTATGTCTCTATTGCTT
                      ____________________________________________________________
consensus TCGATATTAGCCGCAAATGTCCCGACAGGGACGCCTTGGGCTTCTATGTCTCTATTGCTT
 
. : . : . : . : . : . :
JMSF045E04+ GGTCTCAAACTGTTGACATTAAAGCCGTTTGGGTCACTCGAGCTCCCCAGTCCCCAAACC
                      ____________________________________________________________
consensus GGTCTCAAACTGTTGACATTAAAGCCGTTTGGGTCACTCGAGCTCCCCAGTCCCCAAACC
 
. : . : . : . : . : . :
JMFF004M12+ CCCGGACGCACCGGATTTTGTCCGCC
JMSF045E04+ CAGCTTTCAACCTCACAGTTGTCGGTGAAATCTTCCCGGACGCACCGGATTTTGTCCGCC
                      ____________________________________________________________
consensus CAGCTTTCAACCTCACAGTTGTCGGTGAAATCTTCCCGGACGCACCGGATTTTGTCCGCC
 
. : . : . : . : . : . :
JMFF004M12+ GGGGGCTTTTCCGGCGACGTGGTGACGACGTGGCCGACTGCCTTGTACCCCTCCGGCGGA
JMFF014O12+ GGA
JMSF045E04+ GGGGGCTTTTCCGGCGACGTGGTGACGACGTGGCCGACTGCCTTGTACCCCTCCGGCGGA
                      ____________________________________________________________
consensus GGGGGCTTTTCCGGCGACGTGGTGACGACGTGGCCGACTGCCTTGTACCCCTCCGGCGGA
 
. : . : . : . : . : . :
JMFF004M12+ ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
JMFF014O12+ ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
JMSF045E04+ ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
                      ____________________________________________________________
consensus ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
 
. : . : . : . : . : . :
JMFF004M12+ ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
JMFF014O12+ ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
JMSF045E04+ ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
                      ____________________________________________________________
consensus ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
 
. : . : . : . : . : . :
JMFF004M12+ ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
JMFF014O12+ ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
JMSF045E04+ ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
JMSF009C12+ CCCAGAACGGAA
JMSF008C21+ AAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
                      ____________________________________________________________
consensus ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
 
. : . : . : . : . : . :
JMFF004M12+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMFF014O12+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMFF024B08+ GGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMSF045E04+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMSF009C12+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMSF008C21+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
                      ____________________________________________________________
consensus AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
 
. : . : . : . : . : . :
JMFF004M12+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMFF014O12+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMFF024B08+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMSF045E04+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMSF009C12+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMSF008C21+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
                      ____________________________________________________________
consensus TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
 
. : . : . : . : . : . :
JMFF004M12+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMFF014O12+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMFF024B08+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMSF045E04+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMSF009C12+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMSF008C21+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATG-AGGCCAGGTGGGCAACGGGGAA
                      ____________________________________________________________
consensus TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
 
. : . : . : . : . : . :
JMFF004M12+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMFF014O12+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMFF024B08+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMSF045E04+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMSF009C12+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMSF008C21+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
                      ____________________________________________________________
consensus GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
 
. : . : . : . : . : . :
JMFF004M12+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTT
JMFF014O12+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTT
JMFF024B08+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGAGTCTT
JMSF045E04+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTT
JMSF009C12+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAAGATTCTT
JMSF008C21+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTTGC
                      ____________________________________________________________
consensus TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTTGC