clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004M12 | Sequence | 578 | 000618 (6) | ref|XP_009615972.1| | 217 | PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis] | 497 | 002592 (8) | gb|KJB62679.1| | 5e-30 | hypothetical protein B456_009G429700 [Gossypium raimondii] |
JMFF014O12 | Sequence | 481 | 000618 (6) | ref|XP_009615972.1| | 167 | PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis] | 830 | 002592 (8) | emb|CDP14941.1| | 1e-92 | unnamed protein product [Coffea canephora] |
JMFF024B08 | Sequence | 411 | 000618 (6) | ref|XP_009615972.1| | 99.4 | PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis] | 680 | 002592 (8) | emb|CDP14941.1| | 1e-64 | unnamed protein product [Coffea canephora] |
JMSF008C21 | Sequence | 344 | 000618 (6) | ref|XP_009615972.1| | 99.0 | PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis] | 802 | 002592 (8) | emb|CDP14941.1| | 8e-102 | unnamed protein product [Coffea canephora] |
JMSF009C12 | Sequence | 328 | 000618 (6) | ref|XP_009615972.1| | 103 | PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis] | 783 | 002592 (8) | emb|CDP14941.1| | 6e-88 | unnamed protein product [Coffea canephora] |
JMSF045E04 | Sequence | 788 | 000618 (6) | ref|XP_009615972.1| | 303 | PREDICTED: uncharacterized protein LOC104108601 [Nicotiana tomentosiformis] | 759 | 002592 (8) | emb|CDP14941.1| | 5e-88 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF045E04+ TTAGGCATG
____________________________________________________________
consensus TTAGGCATG
. : . : . : . : . : . :
JMSF045E04+ GAAGAAAACGTAGTAAAATTGTTGTTTTTCAGACAAGATAAAGATATGGCGGCTGAGCCG
____________________________________________________________
consensus GAAGAAAACGTAGTAAAATTGTTGTTTTTCAGACAAGATAAAGATATGGCGGCTGAGCCG
. : . : . : . : . : . :
JMSF045E04+ TCGATATTAGCCGCAAATGTCCCGACAGGGACGCCTTGGGCTTCTATGTCTCTATTGCTT
____________________________________________________________
consensus TCGATATTAGCCGCAAATGTCCCGACAGGGACGCCTTGGGCTTCTATGTCTCTATTGCTT
. : . : . : . : . : . :
JMSF045E04+ GGTCTCAAACTGTTGACATTAAAGCCGTTTGGGTCACTCGAGCTCCCCAGTCCCCAAACC
____________________________________________________________
consensus GGTCTCAAACTGTTGACATTAAAGCCGTTTGGGTCACTCGAGCTCCCCAGTCCCCAAACC
. : . : . : . : . : . :
JMFF004M12+ CCCGGACGCACCGGATTTTGTCCGCC
JMSF045E04+ CAGCTTTCAACCTCACAGTTGTCGGTGAAATCTTCCCGGACGCACCGGATTTTGTCCGCC
____________________________________________________________
consensus CAGCTTTCAACCTCACAGTTGTCGGTGAAATCTTCCCGGACGCACCGGATTTTGTCCGCC
. : . : . : . : . : . :
JMFF004M12+ GGGGGCTTTTCCGGCGACGTGGTGACGACGTGGCCGACTGCCTTGTACCCCTCCGGCGGA
JMFF014O12+ GGA
JMSF045E04+ GGGGGCTTTTCCGGCGACGTGGTGACGACGTGGCCGACTGCCTTGTACCCCTCCGGCGGA
____________________________________________________________
consensus GGGGGCTTTTCCGGCGACGTGGTGACGACGTGGCCGACTGCCTTGTACCCCTCCGGCGGA
. : . : . : . : . : . :
JMFF004M12+ ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
JMFF014O12+ ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
JMSF045E04+ ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
____________________________________________________________
consensus ACAGGTAGCCAGATATATGCAGGGGTAGTTTGGTTGATTTTCAGAGCCTCACTGCTCCAT
. : . : . : . : . : . :
JMFF004M12+ ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
JMFF014O12+ ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
JMSF045E04+ ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
____________________________________________________________
consensus ACAAGAGTGTAATCACTCGGCGGCTTTAGAATGTCGGCGCCGGTACTGTTGTCCTTTCCG
. : . : . : . : . : . :
JMFF004M12+ ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
JMFF014O12+ ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
JMSF045E04+ ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
JMSF009C12+ CCCAGAACGGAA
JMSF008C21+ AAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
____________________________________________________________
consensus ACCAGAACCCAACCGAAAAGCGGCTGGTTGTTGGGCTGCCCGTAGTAACCCAGAACGGAA
. : . : . : . : . : . :
JMFF004M12+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMFF014O12+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMFF024B08+ GGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMSF045E04+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMSF009C12+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
JMSF008C21+ AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
____________________________________________________________
consensus AAACCGTCAGGGATGGACGACGGCTCAAAGATTGTCGCTCCGAGGTTGTCGGGCCCTCCT
. : . : . : . : . : . :
JMFF004M12+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMFF014O12+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMFF024B08+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMSF045E04+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMSF009C12+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
JMSF008C21+ TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
____________________________________________________________
consensus TCGTACGTTACCCAAACCTTCTTGAAAGCTGAAATCTGGCAGACATGGAGCCCTCCCAGA
. : . : . : . : . : . :
JMFF004M12+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMFF014O12+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMFF024B08+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMSF045E04+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMSF009C12+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
JMSF008C21+ TCAATATATCCACTCCCAAATTCACCGCCTGATGATG-AGGCCAGGTGGGCAACGGGGAA
____________________________________________________________
consensus TCAATATATCCACTCCCAAATTCACCGCCTGATGATGAAGGCCAGGTGGGCAACGGGGAA
. : . : . : . : . : . :
JMFF004M12+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMFF014O12+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMFF024B08+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMSF045E04+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMSF009C12+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
JMSF008C21+ GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
____________________________________________________________
consensus GGAAGCTTGAAAGCGGAATCAATGGGGCGTGTTTGGGGTTCGTTTTGTGAAGGTAAGCAA
. : . : . : . : . : . :
JMFF004M12+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTT
JMFF014O12+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTT
JMFF024B08+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGAGTCTT
JMSF045E04+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTT
JMSF009C12+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAAGATTCTT
JMSF008C21+ TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTTGC
____________________________________________________________
consensus TTCCCCATTGCTGTGGATTTTGAGAACTGGAATTATTGGCAAAGTTTAAAGGATTCTTGC