Contig 000617:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008C10Sequence292000617 (2)813005655 (2)ref|XP_009789923.1|1e-106PREDICTED: ABC transporter G family member 24-like [Nicotiana sylvestris]
JMSF016O09Sequence345000617 (2)774005655 (2)ref|XP_009789923.1|4e-94PREDICTED: ABC transporter G family member 24-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF016O09+                          CTCGCTGCTGAGAGCAAGCGAGGTGACATTCCTGATGCGGCTGTA
                      ____________________________________________________________
consensus                            CTCGCTGCTGAGAGCAAGCGAGGTGACATTCCTGATGCGGCTGTA
 
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JMSF016O09+           GACTTCCTGAGTCAGCAATTCTTGCACCGCCAGATTATCTACAGATGCGGAGGTTCCTCC
JMSF008C10+                   GAGTCAGCAATTCTTGCACCGCCAGATTATCTACAGATGCGGAGGTTCCTCC
                      ____________________________________________________________
consensus             GACTTCCTGAGTCAGCAATTCTTGCACCGCCAGATTATCTACAGATGCGGAGGTTCCTCC
 
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JMSF016O09+           TCCGCCAATGTCTTCAAAACTTTGAGAATGCGCCAACTTCACTAACAGGCAAGCAGCGAA
JMSF008C10+           TCCGCCAATGTCTTCAAAACTTTGAGAATGCGCCAACTTCACTAACAGGCAAGCAGCGAA
                      ____________________________________________________________
consensus             TCCGCCAATGTCTTCAAAACTTTGAGAATGCGCCAACTTCACTAACAGGCAAGCAGCGAA
 
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JMSF016O09+           AACAGCGCCGGTAAATGCGGAAATGGACGGCGGCATCCTCCACGGCCGCCGGTTTTTCTC
JMSF008C10+           AACAGCGCCGGTAAATGCGGAAATGGACGGCGGCATCCTCCACGGCCGCCGGTTTTTCTC
                      ____________________________________________________________
consensus             AACAGCGCCGGTAAATGCGGAAATGGACGGCGGCATCCTCCACGGCCGCCGGTTTTTCTC
 
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JMSF016O09+           GATTGCTCCTCCTGTCTCCGTCCGAGTTGAGCTGTGGTGAAAGTTCTAACTCCTAATATT
JMSF008C10+           GATTGCTCCTCCTGTCTCCGTCCGAGTTGAGCTGTGGTGAAAGTTCTAACTCCTAATATT
                      ____________________________________________________________
consensus             GATTGCTCCTCCTGTCTCCGTCCGAGTTGAGCTGTGGTGAAAGTTCTAACTCCTAATATT
 
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JMSF016O09+           GTCTTAACTAGAAATTTGACAATCGAAGAAGAAGAGCTGAAGGGGAAGACGTAAGAGTTC
JMSF008C10+           GTCTTAACTAGAAATTTGACAATCGAAGAAGAAGAGCTGAAGGGGAAGACGTAAGAGTTC
                      ____________________________________________________________
consensus             GTCTTAACTAGAAATTTGACAATCGAAGAAGAAGAGCTGAAGGGGAAGACGTAAGAGTTC